Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
CLDN20P56880 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.27□□□□□ -1.57
CLDN20P56880 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CLDN20P56880 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
CLDN20P56880 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CLDN20P56880 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CLDN20P56880 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CLDN20P56880 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.26□□□□□ -1.57
CLDN20P56880 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.26□□□□□ -1.57
CLDN20P56880 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.26□□□□□ -1.57
CLDN20P56880 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CLDN20P56880 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
CLDN20P56880 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.26□□□□□ -1.57
CLDN20P56880 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.26□□□□□ -1.57
CLDN20P56880 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
CLDN20P56880 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CLDN20P56880 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.26□□□□□ -1.57
CLDN20P56880 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.26□□□□□ -1.57
CLDN20P56880 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
CLDN20P56880 RN7SKP145-201ENST00000363291 303 ntBASIC5.26□□□□□ -1.57
CLDN20P56880 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.26□□□□□ -1.57
CLDN20P56880 RNU6-1176P-201ENST00000390955 107 ntBASIC5.26□□□□□ -1.57
CLDN20P56880 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
CLDN20P56880 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.26□□□□□ -1.57
CLDN20P56880 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.26□□□□□ -1.57
CLDN20P56880 DEFA9P-201ENST00000433042 285 ntBASIC5.26□□□□□ -1.57
CLDN20P56880 MTND2P21-201ENST00000436242 1042 ntBASIC5.26□□□□□ -1.57
CLDN20P56880 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5.26□□□□□ -1.57
CLDN20P56880 XKRY2-201ENST00000442362 1093 ntBASIC5.26□□□□□ -1.57
CLDN20P56880 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC5.26□□□□□ -1.57
CLDN20P56880 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.26□□□□□ -1.57
CLDN20P56880 MTND6P5-201ENST00000448266 512 ntBASIC5.26□□□□□ -1.57
CLDN20P56880 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.26□□□□□ -1.57
CLDN20P56880 CCRL1P1-201ENST00000449542 1053 ntBASIC5.26□□□□□ -1.57
CLDN20P56880 CABYRP1-201ENST00000465493 1045 ntBASIC5.26□□□□□ -1.57
CLDN20P56880 AC007998.1-201ENST00000474156 672 ntBASIC5.26□□□□□ -1.57
CLDN20P56880 AC093663.2-201ENST00000484625 313 ntBASIC5.26□□□□□ -1.57
CLDN20P56880 AC015864.1-201ENST00000496512 544 ntBASIC5.26□□□□□ -1.57
CLDN20P56880 UGT2A3P7-201ENST00000510485 734 ntBASIC5.26□□□□□ -1.57
CLDN20P56880 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC5.26□□□□□ -1.57
CLDN20P56880 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC5.26□□□□□ -1.57
CLDN20P56880 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.26□□□□□ -1.57
CLDN20P56880 IGLVIV-66-1-201ENST00000521832 460 ntBASIC5.26□□□□□ -1.57
CLDN20P56880 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC5.26□□□□□ -1.57
CLDN20P56880 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.26□□□□□ -1.57
CLDN20P56880 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC5.26□□□□□ -1.57
CLDN20P56880 HMGN2P36-201ENST00000529541 409 ntBASIC5.26□□□□□ -1.57
CLDN20P56880 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CLDN20P56880 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
CLDN20P56880 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.26□□□□□ -1.57
CLDN20P56880 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.26□□□□□ -1.57
CLDN20P56880 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.26□□□□□ -1.57
CLDN20P56880 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.26□□□□□ -1.57
CLDN20P56880 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.26□□□□□ -1.57
CLDN20P56880 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC5.26□□□□□ -1.57
CLDN20P56880 AL356608.1-201ENST00000610034 820 ntBASIC5.26□□□□□ -1.57
CLDN20P56880 CR589904.2-201ENST00000612533 440 ntBASIC5.26□□□□□ -1.57
CLDN20P56880 AL445493.3-201ENST00000619568 477 ntBASIC5.26□□□□□ -1.57
CLDN20P56880 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.26□□□□□ -1.57
CLDN20P56880 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CLDN20P56880 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CLDN20P56880 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.26□□□□□ -1.57
CLDN20P56880 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CLDN20P56880 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CLDN20P56880 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CLDN20P56880 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.26□□□□□ -1.57
CLDN20P56880 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.26□□□□□ -1.57
CLDN20P56880 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CLDN20P56880 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.26□□□□□ -1.57
CLDN20P56880 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CLDN20P56880 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
CLDN20P56880 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.26□□□□□ -1.57
CLDN20P56880 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CLDN20P56880 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CLDN20P56880 MFSD8-219ENST00000641228 2559 ntBASIC5.25□□□□□ -1.57
CLDN20P56880 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.25□□□□□ -1.57
CLDN20P56880 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.25□□□□□ -1.57
CLDN20P56880 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.25□□□□□ -1.57
CLDN20P56880 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
CLDN20P56880 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
CLDN20P56880 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CLDN20P56880 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.25□□□□□ -1.57
CLDN20P56880 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
CLDN20P56880 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
CLDN20P56880 MTHFD2P5-201ENST00000320415 844 ntBASIC5.25□□□□□ -1.57
CLDN20P56880 RNA5SP284-201ENST00000384547 118 ntBASIC5.25□□□□□ -1.57
CLDN20P56880 OR7E101P-201ENST00000400428 513 ntBASIC5.25□□□□□ -1.57
CLDN20P56880 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.25□□□□□ -1.57
CLDN20P56880 HSFY7P-201ENST00000432672 318 ntBASIC5.25□□□□□ -1.57
CLDN20P56880 RPL23AP19-201ENST00000436229 369 ntBASIC5.25□□□□□ -1.57
CLDN20P56880 HSFY8P-201ENST00000437934 318 ntBASIC5.25□□□□□ -1.57
CLDN20P56880 AL158053.1-201ENST00000441503 453 ntBASIC5.25□□□□□ -1.57
CLDN20P56880 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.25□□□□□ -1.57
CLDN20P56880 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.25□□□□□ -1.57
CLDN20P56880 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC5.25□□□□□ -1.57
CLDN20P56880 HSFY5P-201ENST00000453726 309 ntBASIC5.25□□□□□ -1.57
CLDN20P56880 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.25□□□□□ -1.57
CLDN20P56880 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CLDN20P56880 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CLDN20P56880 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms