Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 NENFP3-201ENST00000503735 313 ntBASIC5.97□□□□□ -1.45
HDAC4P56524 AC074255.1-201ENST00000511259 501 ntBASIC5.97□□□□□ -1.45
HDAC4P56524 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC5.97□□□□□ -1.45
HDAC4P56524 AC021678.3-201ENST00000517893 476 ntBASIC5.97□□□□□ -1.45
HDAC4P56524 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.97□□□□□ -1.45
HDAC4P56524 OR7E10P-201ENST00000526420 991 ntBASIC5.97□□□□□ -1.45
HDAC4P56524 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.97□□□□□ -1.45
HDAC4P56524 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.97□□□□□ -1.45
HDAC4P56524 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.97□□□□□ -1.45
HDAC4P56524 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.97□□□□□ -1.45
HDAC4P56524 DPPA2P4-201ENST00000563717 878 ntBASIC5.97□□□□□ -1.45
HDAC4P56524 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.97□□□□□ -1.45
HDAC4P56524 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.97□□□□□ -1.45
HDAC4P56524 AC090079.2-201ENST00000575289 768 ntBASIC5.97□□□□□ -1.45
HDAC4P56524 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.97□□□□□ -1.45
HDAC4P56524 NANOGP3-201ENST00000605855 286 ntBASIC5.97□□□□□ -1.45
HDAC4P56524 AL096712.1-201ENST00000614561 159 ntBASIC5.97□□□□□ -1.45
HDAC4P56524 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.97□□□□□ -1.45
HDAC4P56524 AC026367.3-201ENST00000619032 590 ntBASIC5.97□□□□□ -1.45
HDAC4P56524 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
HDAC4P56524 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
HDAC4P56524 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.97□□□□□ -1.45
HDAC4P56524 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
HDAC4P56524 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
HDAC4P56524 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.97□□□□□ -1.45
HDAC4P56524 AC239868.2-201ENST00000564237 4527 ntBASIC5.97□□□□□ -1.45
HDAC4P56524 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.96□□□□□ -1.45
HDAC4P56524 AC138907.8-201ENST00000623981 2256 ntBASIC5.96□□□□□ -1.45
HDAC4P56524 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
HDAC4P56524 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
HDAC4P56524 NEPNP-201ENST00000404786 1371 ntBASIC5.96□□□□□ -1.45
HDAC4P56524 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.96□□□□□ -1.46
HDAC4P56524 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
HDAC4P56524 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
HDAC4P56524 MTND5P23-201ENST00000430812 1655 ntBASIC5.96□□□□□ -1.46
HDAC4P56524 AC245100.2-201ENST00000454544 1679 ntBASIC5.96□□□□□ -1.46
HDAC4P56524 OR52B3P-201ENST00000314715 928 ntBASIC5.96□□□□□ -1.46
HDAC4P56524 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.96□□□□□ -1.46
HDAC4P56524 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
HDAC4P56524 RPL11P3-201ENST00000395256 523 ntBASIC5.96□□□□□ -1.46
HDAC4P56524 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.96□□□□□ -1.46
HDAC4P56524 AL445528.1-201ENST00000426330 420 ntBASIC5.96□□□□□ -1.46
HDAC4P56524 AL390879.2-203ENST00000426943 1121 ntBASIC5.96□□□□□ -1.46
HDAC4P56524 EIF2S2P3-201ENST00000428356 999 ntBASIC5.96□□□□□ -1.46
HDAC4P56524 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.96□□□□□ -1.46
HDAC4P56524 SNRPFP2-201ENST00000440710 251 ntBASIC5.96□□□□□ -1.46
HDAC4P56524 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.96□□□□□ -1.46
HDAC4P56524 RPS23P6-201ENST00000466136 431 ntBASIC5.96□□□□□ -1.46
HDAC4P56524 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.96□□□□□ -1.46
HDAC4P56524 OR9N1P-201ENST00000491296 333 ntBASIC5.96□□□□□ -1.46
HDAC4P56524 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.96□□□□□ -1.46
HDAC4P56524 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.96□□□□□ -1.46
HDAC4P56524 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.96□□□□□ -1.46
HDAC4P56524 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.96□□□□□ -1.46
HDAC4P56524 AC005000.1-201ENST00000536192 288 ntBASIC5.96□□□□□ -1.46
HDAC4P56524 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.96□□□□□ -1.46
HDAC4P56524 AC139697.1-201ENST00000548429 745 ntBASIC5.96□□□□□ -1.46
HDAC4P56524 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC5.96□□□□□ -1.46
HDAC4P56524 HSPE1P2-201ENST00000554777 306 ntBASIC5.96□□□□□ -1.46
HDAC4P56524 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
HDAC4P56524 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.96□□□□□ -1.46
HDAC4P56524 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC5.96□□□□□ -1.46
HDAC4P56524 AC015802.2-201ENST00000589690 189 ntBASIC5.96□□□□□ -1.46
HDAC4P56524 AC067838.1-201ENST00000606064 577 ntBASIC5.96□□□□□ -1.46
HDAC4P56524 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
HDAC4P56524 BCORP1-203ENST00000513194 5093 ntBASIC5.96□□□□□ -1.46
HDAC4P56524 AC024341.1-201ENST00000526444 1552 ntBASIC5.96□□□□□ -1.46
HDAC4P56524 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
HDAC4P56524 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
HDAC4P56524 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.96□□□□□ -1.46
HDAC4P56524 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.96□□□□□ -1.46
HDAC4P56524 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
HDAC4P56524 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
HDAC4P56524 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
HDAC4P56524 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HDAC4P56524 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.95□□□□□ -1.46
HDAC4P56524 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
HDAC4P56524 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HDAC4P56524 HSPD1P7-201ENST00000447985 1686 ntBASIC5.95□□□□□ -1.46
HDAC4P56524 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
HDAC4P56524 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HDAC4P56524 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
HDAC4P56524 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HDAC4P56524 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
HDAC4P56524 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.95□□□□□ -1.46
HDAC4P56524 RNU1-136P-201ENST00000384181 164 ntBASIC5.95□□□□□ -1.46
HDAC4P56524 AL358178.1-201ENST00000407698 397 ntBASIC5.95□□□□□ -1.46
HDAC4P56524 HMGN1P20-201ENST00000411849 300 ntBASIC5.95□□□□□ -1.46
HDAC4P56524 SLC20A1P1-201ENST00000413906 956 ntBASIC5.95□□□□□ -1.46
HDAC4P56524 Z68694.1-201ENST00000413929 841 ntBASIC5.95□□□□□ -1.46
HDAC4P56524 AC234781.4-201ENST00000419384 244 ntBASIC5.95□□□□□ -1.46
HDAC4P56524 NENFP1-201ENST00000419476 466 ntBASIC5.95□□□□□ -1.46
HDAC4P56524 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.95□□□□□ -1.46
HDAC4P56524 RNGTTP1-201ENST00000420965 728 ntBASIC5.95□□□□□ -1.46
HDAC4P56524 ARAFP1-201ENST00000422172 605 ntBASIC5.95□□□□□ -1.46
HDAC4P56524 ZNF736P1Y-201ENST00000440402 1276 ntBASIC5.95□□□□□ -1.46
HDAC4P56524 AL606490.8-201ENST00000441624 319 ntBASIC5.95□□□□□ -1.46
HDAC4P56524 MORF4L1P4-201ENST00000450245 976 ntBASIC5.95□□□□□ -1.46
HDAC4P56524 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.95□□□□□ -1.46
HDAC4P56524 HGF-207ENST00000453018 721 ntTSL 3 BASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 141.1 ms