Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
COPB1P53618 SCARNA6.1-201ENST00000516989 238 ntBASIC6.17□□□□□ -1.42
COPB1P53618 AC021678.3-201ENST00000517893 476 ntBASIC6.17□□□□□ -1.42
COPB1P53618 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC6.17□□□□□ -1.42
COPB1P53618 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC6.17□□□□□ -1.42
COPB1P53618 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC6.17□□□□□ -1.42
COPB1P53618 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.17□□□□□ -1.42
COPB1P53618 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC6.17□□□□□ -1.42
COPB1P53618 AC125612.1-201ENST00000547580 377 ntBASIC6.17□□□□□ -1.42
COPB1P53618 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC6.17□□□□□ -1.42
COPB1P53618 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
COPB1P53618 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC6.17□□□□□ -1.42
COPB1P53618 RN7SL753P-201ENST00000581238 290 ntBASIC6.17□□□□□ -1.42
COPB1P53618 AC008507.3-201ENST00000585753 472 ntBASIC6.17□□□□□ -1.42
COPB1P53618 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC6.17□□□□□ -1.42
COPB1P53618 AC009237.13-201ENST00000603193 276 ntBASIC6.17□□□□□ -1.42
COPB1P53618 OR7M1P-201ENST00000608946 533 ntBASIC6.17□□□□□ -1.42
COPB1P53618 AC090607.5-201ENST00000615692 224 ntBASIC6.17□□□□□ -1.42
COPB1P53618 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC6.17□□□□□ -1.42
COPB1P53618 AL590410.1-201ENST00000617925 333 ntBASIC6.17□□□□□ -1.42
COPB1P53618 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC6.17□□□□□ -1.42
COPB1P53618 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC6.17□□□□□ -1.42
COPB1P53618 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
COPB1P53618 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
COPB1P53618 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
COPB1P53618 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
COPB1P53618 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
COPB1P53618 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
COPB1P53618 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC6.17□□□□□ -1.42
COPB1P53618 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC6.17□□□□□ -1.42
COPB1P53618 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
COPB1P53618 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
COPB1P53618 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
COPB1P53618 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
COPB1P53618 AC079097.1-201ENST00000512187 1399 ntBASIC6.17□□□□□ -1.42
COPB1P53618 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
COPB1P53618 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
COPB1P53618 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
COPB1P53618 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
COPB1P53618 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
COPB1P53618 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
COPB1P53618 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC6.16□□□□□ -1.42
COPB1P53618 AC092681.1-201ENST00000297369 291 ntBASIC6.16□□□□□ -1.42
COPB1P53618 COX6B1P3-201ENST00000312310 260 ntBASIC6.16□□□□□ -1.42
COPB1P53618 GAPDHP24-201ENST00000328713 983 ntBASIC6.16□□□□□ -1.42
COPB1P53618 TMSB4XP2-201ENST00000335179 210 ntBASIC6.16□□□□□ -1.42
COPB1P53618 RNA5SP30-201ENST00000365552 115 ntBASIC6.16□□□□□ -1.42
COPB1P53618 FIG4-202ENST00000368941 791 ntTSL 3 BASIC6.16□□□□□ -1.42
COPB1P53618 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
COPB1P53618 RPS6P23-201ENST00000413224 722 ntBASIC6.16□□□□□ -1.42
COPB1P53618 NENFP1-201ENST00000419476 466 ntBASIC6.16□□□□□ -1.42
COPB1P53618 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC6.16□□□□□ -1.42
COPB1P53618 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC6.16□□□□□ -1.42
COPB1P53618 MRPS21P2-201ENST00000424704 264 ntBASIC6.16□□□□□ -1.42
COPB1P53618 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC6.16□□□□□ -1.42
COPB1P53618 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC6.16□□□□□ -1.42
COPB1P53618 AL392003.1-201ENST00000434394 243 ntBASIC6.16□□□□□ -1.42
COPB1P53618 NDUFS5P5-201ENST00000437256 321 ntBASIC6.16□□□□□ -1.42
COPB1P53618 AL596266.1-201ENST00000448132 400 ntBASIC6.16□□□□□ -1.42
COPB1P53618 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC6.16□□□□□ -1.42
COPB1P53618 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC6.16□□□□□ -1.42
COPB1P53618 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC6.16□□□□□ -1.42
COPB1P53618 AZGP1P2-201ENST00000454506 345 ntBASIC6.16□□□□□ -1.42
COPB1P53618 ATP5G1P3-201ENST00000463301 410 ntBASIC6.16□□□□□ -1.42
COPB1P53618 RPL12P24-201ENST00000474907 486 ntBASIC6.16□□□□□ -1.42
COPB1P53618 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
COPB1P53618 TRBV8-1-201ENST00000481590 279 ntBASIC6.16□□□□□ -1.42
COPB1P53618 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC6.16□□□□□ -1.42
COPB1P53618 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC6.16□□□□□ -1.42
COPB1P53618 IGLVIV-66-1-201ENST00000521832 460 ntBASIC6.16□□□□□ -1.42
COPB1P53618 AC079064.1-201ENST00000528365 362 ntBASIC6.16□□□□□ -1.42
COPB1P53618 PMS2P3-207ENST00000529061 717 ntBASIC6.16□□□□□ -1.42
COPB1P53618 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
COPB1P53618 OR5AM1P-201ENST00000532136 1032 ntBASIC6.16□□□□□ -1.42
COPB1P53618 OR4A43P-201ENST00000532938 908 ntBASIC6.16□□□□□ -1.42
COPB1P53618 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC6.16□□□□□ -1.42
COPB1P53618 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC6.16□□□□□ -1.42
COPB1P53618 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC6.16□□□□□ -1.42
COPB1P53618 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC6.16□□□□□ -1.42
COPB1P53618 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC6.16□□□□□ -1.42
COPB1P53618 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC6.16□□□□□ -1.42
COPB1P53618 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC6.16□□□□□ -1.42
COPB1P53618 AC097504.2-201ENST00000608088 454 ntBASIC6.16□□□□□ -1.42
COPB1P53618 AC084036.1-201ENST00000609190 508 ntBASIC6.16□□□□□ -1.42
COPB1P53618 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC6.16□□□□□ -1.42
COPB1P53618 AC109809.1-201ENST00000619665 545 ntBASIC6.16□□□□□ -1.42
COPB1P53618 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
COPB1P53618 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC6.16□□□□□ -1.42
COPB1P53618 ATP5A1P1-201ENST00000454088 1321 ntBASIC6.16□□□□□ -1.42
COPB1P53618 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC6.16□□□□□ -1.42
COPB1P53618 AC090220.1-201ENST00000593078 1699 ntBASIC6.16□□□□□ -1.42
COPB1P53618 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC6.16□□□□□ -1.42
COPB1P53618 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
COPB1P53618 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC6.16□□□□□ -1.42
COPB1P53618 OR4G1P-202ENST00000641173 1788 ntBASIC6.16□□□□□ -1.42
COPB1P53618 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
COPB1P53618 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
COPB1P53618 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
COPB1P53618 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC6.15□□□□□ -1.42
COPB1P53618 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms