Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC4.83□□□□□ -1.64
SRP9P49458 OR13C1P-202ENST00000641378 2919 ntBASIC4.83□□□□□ -1.64
SRP9P49458 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
SRP9P49458 AC093591.2-201ENST00000565254 3843 ntBASIC4.83□□□□□ -1.64
SRP9P49458 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.83□□□□□ -1.64
SRP9P49458 AC091305.2-201ENST00000624049 1576 ntBASIC4.83□□□□□ -1.64
SRP9P49458 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SRP9P49458 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC4.83□□□□□ -1.64
SRP9P49458 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC4.83□□□□□ -1.64
SRP9P49458 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SRP9P49458 OR9K1P-201ENST00000326513 941 ntBASIC4.83□□□□□ -1.64
SRP9P49458 RNF10P1-201ENST00000418589 369 ntBASIC4.83□□□□□ -1.64
SRP9P49458 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC4.83□□□□□ -1.64
SRP9P49458 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC4.83□□□□□ -1.64
SRP9P49458 RPS29P14-201ENST00000431518 171 ntBASIC4.83□□□□□ -1.64
SRP9P49458 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC4.83□□□□□ -1.64
SRP9P49458 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC4.83□□□□□ -1.64
SRP9P49458 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC4.83□□□□□ -1.64
SRP9P49458 AC144530.1-201ENST00000452862 555 ntBASIC4.83□□□□□ -1.64
SRP9P49458 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC4.83□□□□□ -1.64
SRP9P49458 AC073610.1-201ENST00000489971 396 ntBASIC4.83□□□□□ -1.64
SRP9P49458 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC4.83□□□□□ -1.64
SRP9P49458 UGT2A3P7-201ENST00000510485 734 ntBASIC4.83□□□□□ -1.64
SRP9P49458 AC112191.2-201ENST00000522428 333 ntBASIC4.83□□□□□ -1.64
SRP9P49458 TRIM51DP-201ENST00000529746 596 ntBASIC4.83□□□□□ -1.64
SRP9P49458 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC4.83□□□□□ -1.64
SRP9P49458 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC4.83□□□□□ -1.64
SRP9P49458 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC4.83□□□□□ -1.64
SRP9P49458 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC4.83□□□□□ -1.64
SRP9P49458 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SRP9P49458 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
SRP9P49458 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC4.83□□□□□ -1.64
SRP9P49458 MIR4310-201ENST00000582950 57 ntBASIC4.83□□□□□ -1.64
SRP9P49458 AC063977.5-201ENST00000601044 974 ntBASIC4.83□□□□□ -1.64
SRP9P49458 AC127024.6-201ENST00000621598 424 ntBASIC4.83□□□□□ -1.64
SRP9P49458 AC091932.2-201ENST00000623014 291 ntBASIC4.83□□□□□ -1.64
SRP9P49458 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC4.83□□□□□ -1.64
SRP9P49458 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC4.83□□□□□ -1.64
SRP9P49458 AL731532.2-201ENST00000623542 1953 ntBASIC4.83□□□□□ -1.64
SRP9P49458 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SRP9P49458 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.83□□□□□ -1.64
SRP9P49458 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SRP9P49458 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SRP9P49458 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SRP9P49458 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SRP9P49458 AC099654.3-201ENST00000447087 1546 ntBASIC4.82□□□□□ -1.64
SRP9P49458 OR5AQ1P-202ENST00000641257 1534 ntBASIC4.82□□□□□ -1.64
SRP9P49458 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
SRP9P49458 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SRP9P49458 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
SRP9P49458 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
SRP9P49458 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SRP9P49458 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SRP9P49458 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SRP9P49458 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC4.82□□□□□ -1.64
SRP9P49458 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC4.82□□□□□ -1.64
SRP9P49458 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.82□□□□□ -1.64
SRP9P49458 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.82□□□□□ -1.64
SRP9P49458 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SRP9P49458 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.82□□□□□ -1.64
SRP9P49458 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SRP9P49458 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SRP9P49458 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
SRP9P49458 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SRP9P49458 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SRP9P49458 SNORA64.1-201ENST00000362600 132 ntBASIC4.82□□□□□ -1.64
SRP9P49458 RNA5SP394-201ENST00000364216 119 ntBASIC4.82□□□□□ -1.64
SRP9P49458 RN7SKP15-201ENST00000364742 309 ntBASIC4.82□□□□□ -1.64
SRP9P49458 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SRP9P49458 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC4.82□□□□□ -1.64
SRP9P49458 RPS6P23-201ENST00000413224 722 ntBASIC4.82□□□□□ -1.64
SRP9P49458 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC4.82□□□□□ -1.64
SRP9P49458 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC4.82□□□□□ -1.64
SRP9P49458 GAPDHP48-201ENST00000436626 961 ntBASIC4.82□□□□□ -1.64
SRP9P49458 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC4.82□□□□□ -1.64
SRP9P49458 AC073109.1-201ENST00000445066 978 ntBASIC4.82□□□□□ -1.64
SRP9P49458 AL450996.1-201ENST00000445574 1202 ntBASIC4.82□□□□□ -1.64
SRP9P49458 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC4.82□□□□□ -1.64
SRP9P49458 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC4.82□□□□□ -1.64
SRP9P49458 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.82□□□□□ -1.64
SRP9P49458 NXT1P1-201ENST00000458481 316 ntBASIC4.82□□□□□ -1.64
SRP9P49458 PSAT1P4-201ENST00000466500 526 ntBASIC4.82□□□□□ -1.64
SRP9P49458 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC4.82□□□□□ -1.64
SRP9P49458 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SRP9P49458 MYL12BP2-201ENST00000503948 512 ntBASIC4.82□□□□□ -1.64
SRP9P49458 RNU6-1334P-201ENST00000516032 105 ntBASIC4.82□□□□□ -1.64
SRP9P49458 RN7SKP253-201ENST00000516424 309 ntBASIC4.82□□□□□ -1.64
SRP9P49458 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC4.82□□□□□ -1.64
SRP9P49458 CASC19-203ENST00000523510 575 ntTSL 3 BASIC4.82□□□□□ -1.64
SRP9P49458 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC4.82□□□□□ -1.64
SRP9P49458 RN7SL371P-201ENST00000578099 267 ntBASIC4.82□□□□□ -1.64
SRP9P49458 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC4.82□□□□□ -1.64
SRP9P49458 AC107993.1-201ENST00000591343 684 ntBASIC4.82□□□□□ -1.64
SRP9P49458 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC4.82□□□□□ -1.64
SRP9P49458 CDC42EP3P1-201ENST00000601004 764 ntBASIC4.82□□□□□ -1.64
SRP9P49458 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC4.82□□□□□ -1.64
SRP9P49458 AP005431.1-201ENST00000618479 319 ntBASIC4.82□□□□□ -1.64
SRP9P49458 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC4.82□□□□□ -1.64
SRP9P49458 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SRP9P49458 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms