Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 RNA5SP487-201ENST00000410186 122 ntBASIC5.78□□□□□ -1.48
LHX1P48742 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC5.78□□□□□ -1.48
LHX1P48742 BX510359.3-201ENST00000422168 306 ntBASIC5.78□□□□□ -1.48
LHX1P48742 FAM96AP1-201ENST00000430879 482 ntBASIC5.78□□□□□ -1.48
LHX1P48742 RSL24D1P2-201ENST00000445584 366 ntBASIC5.78□□□□□ -1.48
LHX1P48742 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.78□□□□□ -1.48
LHX1P48742 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.78□□□□□ -1.48
LHX1P48742 RPS26P41-201ENST00000450370 284 ntBASIC5.78□□□□□ -1.48
LHX1P48742 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC5.78□□□□□ -1.48
LHX1P48742 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC5.78□□□□□ -1.48
LHX1P48742 AC090058.1-201ENST00000498788 435 ntBASIC5.78□□□□□ -1.48
LHX1P48742 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.78□□□□□ -1.48
LHX1P48742 PGAM1P13-201ENST00000507497 754 ntBASIC5.78□□□□□ -1.48
LHX1P48742 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.78□□□□□ -1.48
LHX1P48742 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.78□□□□□ -1.48
LHX1P48742 RNA5SP34-201ENST00000516887 130 ntBASIC5.78□□□□□ -1.48
LHX1P48742 OR4A17P-201ENST00000526032 904 ntBASIC5.78□□□□□ -1.48
LHX1P48742 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC5.78□□□□□ -1.48
LHX1P48742 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC5.78□□□□□ -1.48
LHX1P48742 AC004825.1-201ENST00000555068 586 ntBASIC5.78□□□□□ -1.48
LHX1P48742 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC5.78□□□□□ -1.48
LHX1P48742 AC011270.1-201ENST00000558606 583 ntBASIC5.78□□□□□ -1.48
LHX1P48742 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
LHX1P48742 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.78□□□□□ -1.48
LHX1P48742 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC5.78□□□□□ -1.48
LHX1P48742 MIR1269B-201ENST00000580405 75 ntBASIC5.78□□□□□ -1.48
LHX1P48742 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.78□□□□□ -1.48
LHX1P48742 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
LHX1P48742 GMCL1P2-201ENST00000605230 823 ntBASIC5.78□□□□□ -1.48
LHX1P48742 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.78□□□□□ -1.48
LHX1P48742 AC107308.1-201ENST00000615897 301 ntBASIC5.78□□□□□ -1.48
LHX1P48742 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.78□□□□□ -1.48
LHX1P48742 AC005618.4-201ENST00000625053 554 ntBASIC5.78□□□□□ -1.48
LHX1P48742 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.78□□□□□ -1.48
LHX1P48742 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
LHX1P48742 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
LHX1P48742 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
LHX1P48742 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
LHX1P48742 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.78□□□□□ -1.48
LHX1P48742 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.78□□□□□ -1.48
LHX1P48742 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
LHX1P48742 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
LHX1P48742 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.78□□□□□ -1.48
LHX1P48742 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.77□□□□□ -1.48
LHX1P48742 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.77□□□□□ -1.49
LHX1P48742 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.77□□□□□ -1.49
LHX1P48742 AC104964.3-201ENST00000606115 2860 ntBASIC5.77□□□□□ -1.49
LHX1P48742 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
LHX1P48742 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
LHX1P48742 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.77□□□□□ -1.49
LHX1P48742 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.77□□□□□ -1.49
LHX1P48742 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
LHX1P48742 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
LHX1P48742 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.77□□□□□ -1.49
LHX1P48742 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
LHX1P48742 RNU4-23P-201ENST00000362839 140 ntBASIC5.77□□□□□ -1.49
LHX1P48742 Y_RNA.62-201ENST00000362840 99 ntBASIC5.77□□□□□ -1.49
LHX1P48742 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
LHX1P48742 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.77□□□□□ -1.49
LHX1P48742 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
LHX1P48742 SNORD56.6-201ENST00000384569 71 ntBASIC5.77□□□□□ -1.49
LHX1P48742 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC5.77□□□□□ -1.49
LHX1P48742 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
LHX1P48742 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.77□□□□□ -1.49
LHX1P48742 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
LHX1P48742 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.77□□□□□ -1.49
LHX1P48742 AC073465.2-201ENST00000440938 498 ntBASIC5.77□□□□□ -1.49
LHX1P48742 OR6C72P-201ENST00000451403 892 ntBASIC5.77□□□□□ -1.49
LHX1P48742 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.77□□□□□ -1.49
LHX1P48742 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.77□□□□□ -1.49
LHX1P48742 CR383656.1-201ENST00000484916 377 ntBASIC5.77□□□□□ -1.49
LHX1P48742 AGGF1P3-201ENST00000493675 1213 ntBASIC5.77□□□□□ -1.49
LHX1P48742 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.77□□□□□ -1.49
LHX1P48742 AC021106.1-201ENST00000509020 1058 ntBASIC5.77□□□□□ -1.49
LHX1P48742 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC5.77□□□□□ -1.49
LHX1P48742 CDC42P3-201ENST00000518493 633 ntBASIC5.77□□□□□ -1.49
LHX1P48742 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC5.77□□□□□ -1.49
LHX1P48742 OR8Q1P-201ENST00000526467 655 ntBASIC5.77□□□□□ -1.49
LHX1P48742 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
LHX1P48742 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC5.77□□□□□ -1.49
LHX1P48742 MEG8-217ENST00000556637 924 ntTSL 5 BASIC5.77□□□□□ -1.49
LHX1P48742 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC5.77□□□□□ -1.49
LHX1P48742 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.77□□□□□ -1.49
LHX1P48742 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
LHX1P48742 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.77□□□□□ -1.49
LHX1P48742 AL139124.1-201ENST00000609123 421 ntBASIC5.77□□□□□ -1.49
LHX1P48742 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC5.77□□□□□ -1.49
LHX1P48742 AL356752.1-201ENST00000615844 593 ntBASIC5.77□□□□□ -1.49
LHX1P48742 AC109583.2-201ENST00000617367 129 ntBASIC5.77□□□□□ -1.49
LHX1P48742 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC5.77□□□□□ -1.49
LHX1P48742 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.77□□□□□ -1.49
LHX1P48742 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.77□□□□□ -1.49
LHX1P48742 AC079097.1-201ENST00000512187 1399 ntBASIC5.77□□□□□ -1.49
LHX1P48742 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
LHX1P48742 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
LHX1P48742 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
LHX1P48742 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
LHX1P48742 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.77□□□□□ -1.49
LHX1P48742 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
LHX1P48742 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms