Protein–RNA interactions for Protein: P35548

MSX2, Homeobox protein MSX-2, humanhuman

Predicted RBP Predictions only

Length 267 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2P35548 NRON-201ENST00000517270 370 ntBASIC5.96□□□□□ -1.46
MSX2P35548 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC5.96□□□□□ -1.46
MSX2P35548 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC5.96□□□□□ -1.46
MSX2P35548 NDUFS5P6-201ENST00000529136 295 ntBASIC5.96□□□□□ -1.46
MSX2P35548 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.96□□□□□ -1.46
MSX2P35548 AC023080.1-201ENST00000551663 931 ntBASIC5.96□□□□□ -1.46
MSX2P35548 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC5.96□□□□□ -1.46
MSX2P35548 AC022898.1-202ENST00000560864 806 ntTSL 2 BASIC5.96□□□□□ -1.46
MSX2P35548 RBM22P1-201ENST00000578589 1214 ntBASIC5.96□□□□□ -1.46
MSX2P35548 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC5.96□□□□□ -1.46
MSX2P35548 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC5.96□□□□□ -1.46
MSX2P35548 DPRXP5-201ENST00000604662 539 ntBASIC5.96□□□□□ -1.46
MSX2P35548 AC124312.4-201ENST00000605533 310 ntBASIC5.96□□□□□ -1.46
MSX2P35548 AC019257.2-201ENST00000605539 497 ntBASIC5.96□□□□□ -1.46
MSX2P35548 AC093635.1-201ENST00000609028 555 ntBASIC5.96□□□□□ -1.46
MSX2P35548 AL355073.2-201ENST00000612106 557 ntBASIC5.96□□□□□ -1.46
MSX2P35548 AL138478.1-201ENST00000612252 832 ntBASIC5.96□□□□□ -1.46
MSX2P35548 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC5.96□□□□□ -1.46
MSX2P35548 AL354976.1-201ENST00000613843 387 ntBASIC5.96□□□□□ -1.46
MSX2P35548 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC5.96□□□□□ -1.46
MSX2P35548 AL158163.2-201ENST00000619110 700 ntBASIC5.96□□□□□ -1.46
MSX2P35548 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
MSX2P35548 AC091965.5-201ENST00000624785 342 ntBASIC5.96□□□□□ -1.46
MSX2P35548 OR5BE1P-202ENST00000641168 1176 ntBASIC5.96□□□□□ -1.46
MSX2P35548 OR8A1-204ENST00000642111 1145 ntBASIC5.96□□□□□ -1.46
MSX2P35548 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC5.96□□□□□ -1.46
MSX2P35548 AC007382.1-201ENST00000624376 2618 ntBASIC5.96□□□□□ -1.46
MSX2P35548 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
MSX2P35548 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
MSX2P35548 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
MSX2P35548 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
MSX2P35548 HSPD1P1-201ENST00000503199 1726 ntBASIC5.96□□□□□ -1.46
MSX2P35548 KYNUP3-201ENST00000574386 1341 ntBASIC5.96□□□□□ -1.46
MSX2P35548 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.96□□□□□ -1.46
MSX2P35548 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
MSX2P35548 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC5.96□□□□□ -1.46
MSX2P35548 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
MSX2P35548 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.96□□□□□ -1.46
MSX2P35548 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.96□□□□□ -1.46
MSX2P35548 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
MSX2P35548 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
MSX2P35548 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.95□□□□□ -1.46
MSX2P35548 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
MSX2P35548 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
MSX2P35548 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
MSX2P35548 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC5.95□□□□□ -1.46
MSX2P35548 AC074141.1-201ENST00000588129 2995 ntBASIC5.95□□□□□ -1.46
MSX2P35548 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC5.95□□□□□ -1.46
MSX2P35548 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
MSX2P35548 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
MSX2P35548 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
MSX2P35548 ATP10D-203ENST00000504445 2550 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
MSX2P35548 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
MSX2P35548 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
MSX2P35548 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
MSX2P35548 OR56A4-201ENST00000330728 1209 ntBASIC5.95□□□□□ -1.46
MSX2P35548 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
MSX2P35548 Y_RNA.77-201ENST00000362962 107 ntBASIC5.95□□□□□ -1.46
MSX2P35548 SNORD35A-201ENST00000363389 86 ntBASIC5.95□□□□□ -1.46
MSX2P35548 RNU4-75P-201ENST00000364621 146 ntBASIC5.95□□□□□ -1.46
MSX2P35548 RNA5SP152-201ENST00000365184 110 ntBASIC5.95□□□□□ -1.46
MSX2P35548 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC5.95□□□□□ -1.46
MSX2P35548 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.95□□□□□ -1.46
MSX2P35548 NCR2-201ENST00000373083 1154 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
MSX2P35548 OR13C3-201ENST00000374781 1108 ntBASIC5.95□□□□□ -1.46
MSX2P35548 RNU6-83P-201ENST00000384568 112 ntBASIC5.95□□□□□ -1.46
MSX2P35548 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.95□□□□□ -1.46
MSX2P35548 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
MSX2P35548 RN7SKP117-201ENST00000410175 264 ntBASIC5.95□□□□□ -1.46
MSX2P35548 RN7SKP281-201ENST00000410472 352 ntBASIC5.95□□□□□ -1.46
MSX2P35548 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.95□□□□□ -1.46
MSX2P35548 AL445213.1-201ENST00000412589 747 ntBASIC5.95□□□□□ -1.46
MSX2P35548 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.95□□□□□ -1.46
MSX2P35548 AL662791.3-201ENST00000413771 776 ntBASIC5.95□□□□□ -1.46
MSX2P35548 TEX41-202ENST00000414256 604 ntTSL 5 BASIC5.95□□□□□ -1.46
MSX2P35548 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC5.95□□□□□ -1.46
MSX2P35548 LINC01881-201ENST00000416103 412 ntBASIC5.95□□□□□ -1.46
MSX2P35548 YWHAZP5-201ENST00000419975 730 ntBASIC5.95□□□□□ -1.46
MSX2P35548 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC5.95□□□□□ -1.46
MSX2P35548 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
MSX2P35548 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC5.95□□□□□ -1.46
MSX2P35548 AL365220.1-201ENST00000432923 399 ntBASIC5.95□□□□□ -1.46
MSX2P35548 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.95□□□□□ -1.46
MSX2P35548 USP24P1-201ENST00000433802 779 ntBASIC5.95□□□□□ -1.46
MSX2P35548 NANOGP2-201ENST00000435391 727 ntBASIC5.95□□□□□ -1.46
MSX2P35548 AL590399.4-201ENST00000436561 601 ntBASIC5.95□□□□□ -1.46
MSX2P35548 AC092393.1-201ENST00000439625 742 ntBASIC5.95□□□□□ -1.46
MSX2P35548 AC239800.1-201ENST00000442049 719 ntBASIC5.95□□□□□ -1.46
MSX2P35548 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC5.95□□□□□ -1.46
MSX2P35548 OTX2P1-201ENST00000450956 354 ntBASIC5.95□□□□□ -1.46
MSX2P35548 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC5.95□□□□□ -1.46
MSX2P35548 RPL7L1P3-201ENST00000455249 689 ntBASIC5.95□□□□□ -1.46
MSX2P35548 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.95□□□□□ -1.46
MSX2P35548 AC063955.1-201ENST00000462872 685 ntBASIC5.95□□□□□ -1.46
MSX2P35548 RPSAP37-201ENST00000470913 821 ntBASIC5.95□□□□□ -1.46
MSX2P35548 RPS4XP6-201ENST00000477670 797 ntBASIC5.95□□□□□ -1.46
MSX2P35548 AC108734.3-201ENST00000481241 1165 ntBASIC5.95□□□□□ -1.46
MSX2P35548 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC5.95□□□□□ -1.46
MSX2P35548 RPS27AP16-201ENST00000492222 470 ntBASIC5.95□□□□□ -1.46
MSX2P35548 RN7SL776P-201ENST00000493390 268 ntBASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms