Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 SNORA56-201ENST00000383966 129 ntBASIC7.79□□□□□ -1.16
HFM1A2PYH4 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC7.79□□□□□ -1.16
HFM1A2PYH4 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC7.79□□□□□ -1.16
HFM1A2PYH4 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC7.79□□□□□ -1.16
HFM1A2PYH4 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC7.79□□□□□ -1.16
HFM1A2PYH4 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC7.79□□□□□ -1.16
HFM1A2PYH4 RNA5SP228-201ENST00000516232 133 ntBASIC7.79□□□□□ -1.16
HFM1A2PYH4 AP001922.4-201ENST00000526967 290 ntBASIC7.79□□□□□ -1.16
HFM1A2PYH4 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC7.79□□□□□ -1.16
HFM1A2PYH4 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC7.79□□□□□ -1.16
HFM1A2PYH4 AC009597.2-201ENST00000604659 592 ntBASIC7.79□□□□□ -1.16
HFM1A2PYH4 AP002799.1-201ENST00000623552 423 ntBASIC7.79□□□□□ -1.16
HFM1A2PYH4 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC7.79□□□□□ -1.16
HFM1A2PYH4 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
HFM1A2PYH4 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC7.79□□□□□ -1.16
HFM1A2PYH4 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
HFM1A2PYH4 AC002090.1-201ENST00000625000 2138 ntBASIC7.79□□□□□ -1.16
HFM1A2PYH4 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
HFM1A2PYH4 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
HFM1A2PYH4 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC7.79□□□□□ -1.16
HFM1A2PYH4 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
HFM1A2PYH4 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
HFM1A2PYH4 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
HFM1A2PYH4 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
HFM1A2PYH4 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
HFM1A2PYH4 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC7.78□□□□□ -1.16
HFM1A2PYH4 RNA5SP453-201ENST00000362503 119 ntBASIC7.78□□□□□ -1.16
HFM1A2PYH4 AL139128.1-201ENST00000413921 941 ntBASIC7.78□□□□□ -1.16
HFM1A2PYH4 ATP6V1G1P7-201ENST00000415853 349 ntBASIC7.78□□□□□ -1.16
HFM1A2PYH4 AL772161.1-201ENST00000439130 476 ntBASIC7.78□□□□□ -1.16
HFM1A2PYH4 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC7.78□□□□□ -1.16
HFM1A2PYH4 EIF3KP3-201ENST00000514461 639 ntBASIC7.78□□□□□ -1.16
HFM1A2PYH4 AC022360.1-201ENST00000521058 340 ntBASIC7.78□□□□□ -1.16
HFM1A2PYH4 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC7.78□□□□□ -1.16
HFM1A2PYH4 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC7.78□□□□□ -1.16
HFM1A2PYH4 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
HFM1A2PYH4 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
HFM1A2PYH4 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC7.78□□□□□ -1.16
HFM1A2PYH4 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC7.78□□□□□ -1.16
HFM1A2PYH4 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
HFM1A2PYH4 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC7.78□□□□□ -1.16
HFM1A2PYH4 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
HFM1A2PYH4 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
HFM1A2PYH4 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
HFM1A2PYH4 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
HFM1A2PYH4 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
HFM1A2PYH4 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
HFM1A2PYH4 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
HFM1A2PYH4 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
HFM1A2PYH4 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC7.78□□□□□ -1.16
HFM1A2PYH4 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
HFM1A2PYH4 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
HFM1A2PYH4 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC7.78□□□□□ -1.16
HFM1A2PYH4 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC7.78□□□□□ -1.16
HFM1A2PYH4 AC097484.1-201ENST00000471148 389 ntBASIC7.78□□□□□ -1.16
HFM1A2PYH4 RPSAP51-201ENST00000497462 645 ntBASIC7.78□□□□□ -1.16
HFM1A2PYH4 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC7.78□□□□□ -1.16
HFM1A2PYH4 AC092490.3-201ENST00000545370 572 ntBASIC7.78□□□□□ -1.16
HFM1A2PYH4 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
HFM1A2PYH4 AC104785.1-201ENST00000603220 588 ntBASIC7.78□□□□□ -1.16
HFM1A2PYH4 AL445528.2-201ENST00000620582 470 ntBASIC7.78□□□□□ -1.16
HFM1A2PYH4 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC7.78□□□□□ -1.16
HFM1A2PYH4 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.16
HFM1A2PYH4 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC7.77□□□□□ -1.17
HFM1A2PYH4 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
HFM1A2PYH4 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
HFM1A2PYH4 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
HFM1A2PYH4 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
HFM1A2PYH4 CCDC125-201ENST00000383374 2006 ntTSL 5 BASIC7.77□□□□□ -1.17
HFM1A2PYH4 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
HFM1A2PYH4 RN7SKP153-201ENST00000365026 316 ntBASIC7.77□□□□□ -1.17
HFM1A2PYH4 SNORA48.4-201ENST00000391089 134 ntBASIC7.77□□□□□ -1.17
HFM1A2PYH4 AC090018.1-201ENST00000434369 367 ntBASIC7.77□□□□□ -1.17
HFM1A2PYH4 RPL37AP8-201ENST00000494116 276 ntBASIC7.77□□□□□ -1.17
HFM1A2PYH4 HIGD1AP5-201ENST00000529959 259 ntBASIC7.77□□□□□ -1.17
HFM1A2PYH4 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC7.77□□□□□ -1.17
HFM1A2PYH4 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC7.77□□□□□ -1.17
HFM1A2PYH4 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC7.77□□□□□ -1.17
HFM1A2PYH4 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC7.77□□□□□ -1.17
HFM1A2PYH4 AC011840.5-201ENST00000582125 771 ntBASIC7.77□□□□□ -1.17
HFM1A2PYH4 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC7.77□□□□□ -1.17
HFM1A2PYH4 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC7.77□□□□□ -1.17
HFM1A2PYH4 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
HFM1A2PYH4 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
HFM1A2PYH4 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
HFM1A2PYH4 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC7.76□□□□□ -1.17
HFM1A2PYH4 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
HFM1A2PYH4 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC7.76□□□□□ -1.17
HFM1A2PYH4 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC7.76□□□□□ -1.17
HFM1A2PYH4 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC7.76□□□□□ -1.17
HFM1A2PYH4 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
HFM1A2PYH4 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
HFM1A2PYH4 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
HFM1A2PYH4 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
HFM1A2PYH4 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC7.76□□□□□ -1.17
HFM1A2PYH4 HSPA8P15-201ENST00000401676 786 ntBASIC7.76□□□□□ -1.17
HFM1A2PYH4 RNU6ATAC7P-201ENST00000408111 127 ntBASIC7.76□□□□□ -1.17
HFM1A2PYH4 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
HFM1A2PYH4 RPL19P16-201ENST00000433839 588 ntBASIC7.76□□□□□ -1.17
HFM1A2PYH4 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms