Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC5.69□□□□□ -1.5
TCRBV7S3A2A0A539 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC5.69□□□□□ -1.5
TCRBV7S3A2A0A539 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC5.69□□□□□ -1.5
TCRBV7S3A2A0A539 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC5.69□□□□□ -1.5
TCRBV7S3A2A0A539 MIR4311-201ENST00000580794 100 ntBASIC5.69□□□□□ -1.5
TCRBV7S3A2A0A539 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.69□□□□□ -1.5
TCRBV7S3A2A0A539 AC015802.2-201ENST00000589690 189 ntBASIC5.69□□□□□ -1.5
TCRBV7S3A2A0A539 AC245884.10-201ENST00000597355 337 ntBASIC5.69□□□□□ -1.5
TCRBV7S3A2A0A539 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC5.69□□□□□ -1.5
TCRBV7S3A2A0A539 AL031601.1-201ENST00000605702 394 ntBASIC5.69□□□□□ -1.5
TCRBV7S3A2A0A539 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.69□□□□□ -1.5
TCRBV7S3A2A0A539 AC034229.4-201ENST00000607861 441 ntBASIC5.69□□□□□ -1.5
TCRBV7S3A2A0A539 AL096803.3-201ENST00000609032 532 ntBASIC5.69□□□□□ -1.5
TCRBV7S3A2A0A539 AL139124.1-201ENST00000609123 421 ntBASIC5.69□□□□□ -1.5
TCRBV7S3A2A0A539 AC015922.4-201ENST00000612568 690 ntBASIC5.69□□□□□ -1.5
TCRBV7S3A2A0A539 AC016597.2-201ENST00000613256 341 ntBASIC5.69□□□□□ -1.5
TCRBV7S3A2A0A539 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TCRBV7S3A2A0A539 AC048341.3-201ENST00000619323 491 ntBASIC5.69□□□□□ -1.5
TCRBV7S3A2A0A539 AC022960.3-201ENST00000619794 441 ntBASIC5.69□□□□□ -1.5
TCRBV7S3A2A0A539 AL591926.1-201ENST00000620542 217 ntBASIC5.69□□□□□ -1.5
TCRBV7S3A2A0A539 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
TCRBV7S3A2A0A539 AC007683.2-201ENST00000624681 714 ntBASIC5.69□□□□□ -1.5
TCRBV7S3A2A0A539 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TCRBV7S3A2A0A539 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
TCRBV7S3A2A0A539 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.69□□□□□ -1.5
TCRBV7S3A2A0A539 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TCRBV7S3A2A0A539 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TCRBV7S3A2A0A539 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.69□□□□□ -1.5
TCRBV7S3A2A0A539 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TCRBV7S3A2A0A539 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.69□□□□□ -1.5
TCRBV7S3A2A0A539 ICE2P1-201ENST00000512800 1849 ntBASIC5.69□□□□□ -1.5
TCRBV7S3A2A0A539 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.69□□□□□ -1.5
TCRBV7S3A2A0A539 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.69□□□□□ -1.5
TCRBV7S3A2A0A539 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TCRBV7S3A2A0A539 AC079097.1-201ENST00000512187 1399 ntBASIC5.68□□□□□ -1.5
TCRBV7S3A2A0A539 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
TCRBV7S3A2A0A539 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.68□□□□□ -1.5
TCRBV7S3A2A0A539 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TCRBV7S3A2A0A539 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TCRBV7S3A2A0A539 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
TCRBV7S3A2A0A539 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.68□□□□□ -1.5
TCRBV7S3A2A0A539 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
TCRBV7S3A2A0A539 IFIT1P1-201ENST00000400497 1449 ntBASIC5.68□□□□□ -1.5
TCRBV7S3A2A0A539 CAP1P2-201ENST00000417455 1409 ntBASIC5.68□□□□□ -1.5
TCRBV7S3A2A0A539 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
TCRBV7S3A2A0A539 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TCRBV7S3A2A0A539 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.68□□□□□ -1.5
TCRBV7S3A2A0A539 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
TCRBV7S3A2A0A539 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
TCRBV7S3A2A0A539 OR4K17-201ENST00000315543 1032 ntBASIC5.68□□□□□ -1.5
TCRBV7S3A2A0A539 RNU6-792P-201ENST00000363490 107 ntBASIC5.68□□□□□ -1.5
TCRBV7S3A2A0A539 AC004386.1-201ENST00000393214 761 ntBASIC5.68□□□□□ -1.5
TCRBV7S3A2A0A539 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
TCRBV7S3A2A0A539 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
TCRBV7S3A2A0A539 RSL24D1P1-201ENST00000404972 493 ntBASIC5.68□□□□□ -1.5
TCRBV7S3A2A0A539 AL353692.2-201ENST00000407054 335 ntBASIC5.68□□□□□ -1.5
TCRBV7S3A2A0A539 GPS2P1-201ENST00000411761 986 ntBASIC5.68□□□□□ -1.5
TCRBV7S3A2A0A539 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.68□□□□□ -1.5
TCRBV7S3A2A0A539 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC5.68□□□□□ -1.5
TCRBV7S3A2A0A539 MTND4P11-201ENST00000417020 1058 ntBASIC5.68□□□□□ -1.5
TCRBV7S3A2A0A539 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.68□□□□□ -1.5
TCRBV7S3A2A0A539 AC066692.1-201ENST00000421721 457 ntBASIC5.68□□□□□ -1.5
TCRBV7S3A2A0A539 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.68□□□□□ -1.5
TCRBV7S3A2A0A539 AC127526.2-201ENST00000426436 775 ntBASIC5.68□□□□□ -1.5
TCRBV7S3A2A0A539 AC006335.2-201ENST00000437993 330 ntBASIC5.68□□□□□ -1.5
TCRBV7S3A2A0A539 AC073465.2-201ENST00000440938 498 ntBASIC5.68□□□□□ -1.5
TCRBV7S3A2A0A539 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC5.68□□□□□ -1.5
TCRBV7S3A2A0A539 BUD31P2-201ENST00000449374 300 ntBASIC5.68□□□□□ -1.5
TCRBV7S3A2A0A539 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.68□□□□□ -1.5
TCRBV7S3A2A0A539 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.68□□□□□ -1.5
TCRBV7S3A2A0A539 ATP5LP5-201ENST00000483050 299 ntBASIC5.68□□□□□ -1.5
TCRBV7S3A2A0A539 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.68□□□□□ -1.5
TCRBV7S3A2A0A539 AC067904.2-201ENST00000517322 1283 ntBASIC5.68□□□□□ -1.5
TCRBV7S3A2A0A539 AC011853.1-201ENST00000518911 454 ntBASIC5.68□□□□□ -1.5
TCRBV7S3A2A0A539 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
TCRBV7S3A2A0A539 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.68□□□□□ -1.5
TCRBV7S3A2A0A539 PMS2P3-207ENST00000529061 717 ntBASIC5.68□□□□□ -1.5
TCRBV7S3A2A0A539 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC5.68□□□□□ -1.5
TCRBV7S3A2A0A539 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC5.68□□□□□ -1.5
TCRBV7S3A2A0A539 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC5.68□□□□□ -1.5
TCRBV7S3A2A0A539 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.68□□□□□ -1.5
TCRBV7S3A2A0A539 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.68□□□□□ -1.5
TCRBV7S3A2A0A539 AF129408.1-201ENST00000608767 431 ntBASIC5.68□□□□□ -1.5
TCRBV7S3A2A0A539 AL592494.3-201ENST00000609485 464 ntBASIC5.68□□□□□ -1.5
TCRBV7S3A2A0A539 AL162574.1-201ENST00000615702 950 ntBASIC5.68□□□□□ -1.5
TCRBV7S3A2A0A539 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.68□□□□□ -1.5
TCRBV7S3A2A0A539 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC5.68□□□□□ -1.5
TCRBV7S3A2A0A539 AP000432.2-201ENST00000624164 2048 ntBASIC5.68□□□□□ -1.5
TCRBV7S3A2A0A539 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TCRBV7S3A2A0A539 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TCRBV7S3A2A0A539 AC120036.2-201ENST00000509729 1474 ntBASIC5.68□□□□□ -1.5
TCRBV7S3A2A0A539 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TCRBV7S3A2A0A539 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TCRBV7S3A2A0A539 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TCRBV7S3A2A0A539 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.68□□□□□ -1.5
TCRBV7S3A2A0A539 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.68□□□□□ -1.5
TCRBV7S3A2A0A539 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TCRBV7S3A2A0A539 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
TCRBV7S3A2A0A539 ABCC13-202ENST00000463099 3842 ntBASIC5.68□□□□□ -1.5
TCRBV7S3A2A0A539 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 138.1 ms