Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 ZADH2-202ENST00000537114 3205 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
ZC3H4Q9UPT8 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC8.44□□□□□ -1.06
ZC3H4Q9UPT8 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC8.44□□□□□ -1.06
ZC3H4Q9UPT8 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC8.44□□□□□ -1.06
ZC3H4Q9UPT8 GPX6-201ENST00000361902 1712 ntAPPRIS P2 TSL 1 (best) BASIC8.44□□□□□ -1.06
ZC3H4Q9UPT8 GPX6-204ENST00000612264 1709 ntAPPRIS ALT1 TSL 5 BASIC8.44□□□□□ -1.06
ZC3H4Q9UPT8 CLASP2-213ENST00000480013 5972 ntTSL 5 BASIC8.44□□□□□ -1.06
ZC3H4Q9UPT8 MEPE-208ENST00000540395 2135 ntAPPRIS ALT2 TSL 4 BASIC8.44□□□□□ -1.06
ZC3H4Q9UPT8 GGCX-201ENST00000233838 7569 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
ZC3H4Q9UPT8 SRPX2-201ENST00000373004 6679 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
ZC3H4Q9UPT8 ZNF334-201ENST00000347606 3890 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
ZC3H4Q9UPT8 SCIN-209ENST00000519209 2660 ntTSL 2 BASIC8.43□□□□□ -1.06
ZC3H4Q9UPT8 ARF4-209ENST00000496292 1467 ntTSL 5 BASIC8.43□□□□□ -1.06
ZC3H4Q9UPT8 MAP4K4-203ENST00000347699 3792 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
ZC3H4Q9UPT8 SLC7A2-204ENST00000494857 7622 ntAPPRIS ALT1 TSL 5 BASIC8.43□□□□□ -1.06
ZC3H4Q9UPT8 AC004988.1-201ENST00000415237 1771 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
ZC3H4Q9UPT8 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC8.43□□□□□ -1.06
ZC3H4Q9UPT8 CRBN-203ENST00000432408 2203 ntAPPRIS ALT1 TSL 1 (best) BASIC8.43□□□□□ -1.06
ZC3H4Q9UPT8 TSHZ2-201ENST00000329613 3093 ntTSL 4 BASIC8.43□□□□□ -1.06
ZC3H4Q9UPT8 SLC5A1-204ENST00000543737 4752 ntTSL 2 BASIC8.43□□□□□ -1.06
ZC3H4Q9UPT8 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC8.43□□□□□ -1.06
ZC3H4Q9UPT8 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
ZC3H4Q9UPT8 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
ZC3H4Q9UPT8 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
ZC3H4Q9UPT8 Y_RNA.18-201ENST00000362461 102 ntBASIC8.43□□□□□ -1.06
ZC3H4Q9UPT8 RNU4-12P-201ENST00000365233 139 ntBASIC8.43□□□□□ -1.06
ZC3H4Q9UPT8 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
ZC3H4Q9UPT8 RNU6-1055P-201ENST00000391085 107 ntBASIC8.43□□□□□ -1.06
ZC3H4Q9UPT8 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
ZC3H4Q9UPT8 GCNT1P4-201ENST00000404096 329 ntBASIC8.43□□□□□ -1.06
ZC3H4Q9UPT8 RPL12P23-201ENST00000405880 490 ntBASIC8.43□□□□□ -1.06
ZC3H4Q9UPT8 UBTFL3-201ENST00000418934 1024 ntBASIC8.43□□□□□ -1.06
ZC3H4Q9UPT8 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC8.43□□□□□ -1.06
ZC3H4Q9UPT8 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC8.43□□□□□ -1.06
ZC3H4Q9UPT8 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC8.43□□□□□ -1.06
ZC3H4Q9UPT8 AC104843.2-201ENST00000427666 297 ntBASIC8.43□□□□□ -1.06
ZC3H4Q9UPT8 HMGB1P5-202ENST00000451497 985 ntBASIC8.43□□□□□ -1.06
ZC3H4Q9UPT8 AC107398.1-201ENST00000486904 505 ntBASIC8.43□□□□□ -1.06
ZC3H4Q9UPT8 CCDC11P1-201ENST00000503137 1162 ntBASIC8.43□□□□□ -1.06
ZC3H4Q9UPT8 PGAM4P2-201ENST00000512491 721 ntBASIC8.43□□□□□ -1.06
ZC3H4Q9UPT8 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC8.43□□□□□ -1.06
ZC3H4Q9UPT8 KCTD9P4-201ENST00000526766 1166 ntBASIC8.43□□□□□ -1.06
ZC3H4Q9UPT8 AP005639.2-201ENST00000527592 928 ntBASIC8.43□□□□□ -1.06
ZC3H4Q9UPT8 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC8.43□□□□□ -1.06
ZC3H4Q9UPT8 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC8.43□□□□□ -1.06
ZC3H4Q9UPT8 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC8.43□□□□□ -1.06
ZC3H4Q9UPT8 AC044913.1-201ENST00000557200 430 ntBASIC8.43□□□□□ -1.06
ZC3H4Q9UPT8 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC8.43□□□□□ -1.06
ZC3H4Q9UPT8 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC8.43□□□□□ -1.06
ZC3H4Q9UPT8 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC8.43□□□□□ -1.06
ZC3H4Q9UPT8 AC007255.2-201ENST00000604053 631 ntBASIC8.43□□□□□ -1.06
ZC3H4Q9UPT8 AL135999.3-201ENST00000610501 812 ntBASIC8.43□□□□□ -1.06
ZC3H4Q9UPT8 MIR6768-201ENST00000610734 72 ntBASIC8.43□□□□□ -1.06
ZC3H4Q9UPT8 AL096712.1-201ENST00000614561 159 ntBASIC8.43□□□□□ -1.06
ZC3H4Q9UPT8 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC8.43□□□□□ -1.06
ZC3H4Q9UPT8 MFSD8-245ENST00000641743 948 ntBASIC8.43□□□□□ -1.06
ZC3H4Q9UPT8 SH3D19-203ENST00000409598 5284 ntAPPRIS ALT1 TSL 1 (best) BASIC8.43□□□□□ -1.06
ZC3H4Q9UPT8 ADGRA3-209ENST00000508133 1572 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
ZC3H4Q9UPT8 FSTL5-203ENST00000427802 2920 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
ZC3H4Q9UPT8 CCDC30-202ENST00000342022 3098 ntAPPRIS P2 TSL 5 BASIC8.43□□□□□ -1.06
ZC3H4Q9UPT8 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
ZC3H4Q9UPT8 CACNB2-213ENST00000612134 3825 ntTSL 5 BASIC8.43□□□□□ -1.06
ZC3H4Q9UPT8 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
ZC3H4Q9UPT8 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
ZC3H4Q9UPT8 MAPK10-380ENST00000642015 3137 ntAPPRIS P2 BASIC8.43□□□□□ -1.06
ZC3H4Q9UPT8 MFSD8-217ENST00000641178 4374 ntBASIC8.42□□□□□ -1.06
ZC3H4Q9UPT8 AC007406.5-201ENST00000570140 3170 ntBASIC8.42□□□□□ -1.06
ZC3H4Q9UPT8 KIF6-202ENST00000287152 9082 ntAPPRIS P1 TSL 2 BASIC8.42□□□□□ -1.06
ZC3H4Q9UPT8 SIPA1L1-202ENST00000381232 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC8.42□□□□□ -1.06
ZC3H4Q9UPT8 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
ZC3H4Q9UPT8 MRRFP1-201ENST00000435941 1675 ntBASIC8.42□□□□□ -1.06
ZC3H4Q9UPT8 DIS3L2-202ENST00000325385 3501 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
ZC3H4Q9UPT8 ERG-208ENST00000417133 5023 ntAPPRIS ALT1 TSL 2 BASIC8.42□□□□□ -1.06
ZC3H4Q9UPT8 ESRP1-204ENST00000454170 3482 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
ZC3H4Q9UPT8 VN2R3P-201ENST00000422626 1412 ntBASIC8.42□□□□□ -1.06
ZC3H4Q9UPT8 ZNF587B-201ENST00000442832 3339 ntTSL 2 BASIC8.42□□□□□ -1.06
ZC3H4Q9UPT8 AC061975.5-201ENST00000584928 1441 ntBASIC8.42□□□□□ -1.06
ZC3H4Q9UPT8 SPA17-204ENST00000532692 4949 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
ZC3H4Q9UPT8 PPIAP26-201ENST00000377951 522 ntBASIC8.42□□□□□ -1.06
ZC3H4Q9UPT8 XGY1-201ENST00000381172 446 ntBASIC8.42□□□□□ -1.06
ZC3H4Q9UPT8 LARP1P1-201ENST00000407692 292 ntBASIC8.42□□□□□ -1.06
ZC3H4Q9UPT8 SNORA77.2-201ENST00000408571 112 ntBASIC8.42□□□□□ -1.06
ZC3H4Q9UPT8 RNU2-41P-201ENST00000410991 178 ntBASIC8.42□□□□□ -1.06
ZC3H4Q9UPT8 USP9YP6-201ENST00000413550 854 ntBASIC8.42□□□□□ -1.06
ZC3H4Q9UPT8 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC8.42□□□□□ -1.06
ZC3H4Q9UPT8 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC8.42□□□□□ -1.06
ZC3H4Q9UPT8 RPSAP65-201ENST00000429660 595 ntBASIC8.42□□□□□ -1.06
ZC3H4Q9UPT8 AC110602.1-201ENST00000437414 318 ntBASIC8.42□□□□□ -1.06
ZC3H4Q9UPT8 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC8.42□□□□□ -1.06
ZC3H4Q9UPT8 RPL5P7-201ENST00000444235 813 ntBASIC8.42□□□□□ -1.06
ZC3H4Q9UPT8 CLDN34-201ENST00000445307 995 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
ZC3H4Q9UPT8 USP9YP34-201ENST00000453983 808 ntBASIC8.42□□□□□ -1.06
ZC3H4Q9UPT8 AC010878.1-201ENST00000456500 1047 ntBASIC8.42□□□□□ -1.06
ZC3H4Q9UPT8 XACT-201ENST00000468762 497 ntTSL 5 BASIC8.42□□□□□ -1.06
ZC3H4Q9UPT8 AC091959.2-201ENST00000477363 321 ntBASIC8.42□□□□□ -1.06
ZC3H4Q9UPT8 RPL23AP8-201ENST00000479812 475 ntBASIC8.42□□□□□ -1.06
ZC3H4Q9UPT8 RPS26P24-201ENST00000497656 331 ntBASIC8.42□□□□□ -1.06
ZC3H4Q9UPT8 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC8.42□□□□□ -1.06
ZC3H4Q9UPT8 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
ZC3H4Q9UPT8 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC8.42□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms