Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
SCAPERQ9BY12 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
SCAPERQ9BY12 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
SCAPERQ9BY12 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC8.06□□□□□ -1.12
SCAPERQ9BY12 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
SCAPERQ9BY12 SNORA62-201ENST00000365493 153 ntBASIC8.06□□□□□ -1.12
SCAPERQ9BY12 RNU1-136P-201ENST00000384181 164 ntBASIC8.06□□□□□ -1.12
SCAPERQ9BY12 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
SCAPERQ9BY12 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC8.06□□□□□ -1.12
SCAPERQ9BY12 RNGTTP1-201ENST00000420965 728 ntBASIC8.06□□□□□ -1.12
SCAPERQ9BY12 RPL34P20-201ENST00000442771 351 ntBASIC8.06□□□□□ -1.12
SCAPERQ9BY12 RPL12P39-201ENST00000455456 496 ntBASIC8.06□□□□□ -1.12
SCAPERQ9BY12 AP000797.2-201ENST00000475768 606 ntBASIC8.06□□□□□ -1.12
SCAPERQ9BY12 RN7SL423P-201ENST00000486202 304 ntBASIC8.06□□□□□ -1.12
SCAPERQ9BY12 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC8.06□□□□□ -1.12
SCAPERQ9BY12 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
SCAPERQ9BY12 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC8.06□□□□□ -1.12
SCAPERQ9BY12 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC8.06□□□□□ -1.12
SCAPERQ9BY12 RN7SL356P-201ENST00000582228 248 ntBASIC8.06□□□□□ -1.12
SCAPERQ9BY12 MIR6780A-201ENST00000615089 68 ntBASIC8.06□□□□□ -1.12
SCAPERQ9BY12 MIR6758-201ENST00000620653 63 ntBASIC8.06□□□□□ -1.12
SCAPERQ9BY12 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC8.06□□□□□ -1.12
SCAPERQ9BY12 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC8.06□□□□□ -1.12
SCAPERQ9BY12 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC8.06□□□□□ -1.12
SCAPERQ9BY12 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
SCAPERQ9BY12 AC007996.1-201ENST00000620414 2821 ntBASIC8.06□□□□□ -1.12
SCAPERQ9BY12 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
SCAPERQ9BY12 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
SCAPERQ9BY12 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC8.06□□□□□ -1.12
SCAPERQ9BY12 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
SCAPERQ9BY12 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
SCAPERQ9BY12 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC8.06□□□□□ -1.12
SCAPERQ9BY12 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC8.06□□□□□ -1.12
SCAPERQ9BY12 MAPK10-338ENST00000641647 3362 ntBASIC8.05□□□□□ -1.12
SCAPERQ9BY12 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
SCAPERQ9BY12 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
SCAPERQ9BY12 AC068538.1-201ENST00000376856 336 ntBASIC8.05□□□□□ -1.12
SCAPERQ9BY12 AC092570.3-201ENST00000420113 693 ntBASIC8.05□□□□□ -1.12
SCAPERQ9BY12 RPS4XP16-201ENST00000427198 791 ntBASIC8.05□□□□□ -1.12
SCAPERQ9BY12 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC8.05□□□□□ -1.12
SCAPERQ9BY12 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC8.05□□□□□ -1.12
SCAPERQ9BY12 AC092754.1-201ENST00000472975 479 ntBASIC8.05□□□□□ -1.12
SCAPERQ9BY12 HPRT1P1-201ENST00000509498 657 ntBASIC8.05□□□□□ -1.12
SCAPERQ9BY12 AP001269.1-201ENST00000592820 528 ntTSL 4 BASIC8.05□□□□□ -1.12
SCAPERQ9BY12 XIST-210ENST00000602863 775 ntTSL 3 BASIC8.05□□□□□ -1.12
SCAPERQ9BY12 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC8.05□□□□□ -1.12
SCAPERQ9BY12 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
SCAPERQ9BY12 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
SCAPERQ9BY12 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
SCAPERQ9BY12 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
SCAPERQ9BY12 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
SCAPERQ9BY12 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
SCAPERQ9BY12 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC8.04□□□□□ -1.12
SCAPERQ9BY12 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC8.04□□□□□ -1.12
SCAPERQ9BY12 RPS17P5-201ENST00000498293 408 ntBASIC8.04□□□□□ -1.12
SCAPERQ9BY12 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC8.04□□□□□ -1.12
SCAPERQ9BY12 snoU109.5-201ENST00000516231 132 ntBASIC8.04□□□□□ -1.12
SCAPERQ9BY12 UBE2FP2-201ENST00000566646 462 ntBASIC8.04□□□□□ -1.12
SCAPERQ9BY12 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC8.04□□□□□ -1.12
SCAPERQ9BY12 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC8.04□□□□□ -1.12
SCAPERQ9BY12 AC068790.7-201ENST00000602347 528 ntBASIC8.04□□□□□ -1.12
SCAPERQ9BY12 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC8.04□□□□□ -1.12
SCAPERQ9BY12 HSPD1P7-201ENST00000447985 1686 ntBASIC8.04□□□□□ -1.12
SCAPERQ9BY12 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
SCAPERQ9BY12 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
SCAPERQ9BY12 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
SCAPERQ9BY12 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
SCAPERQ9BY12 AC114774.1-201ENST00000507410 1770 ntBASIC8.04□□□□□ -1.12
SCAPERQ9BY12 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC8.04□□□□□ -1.12
SCAPERQ9BY12 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
SCAPERQ9BY12 MR1-209ENST00000617803 7584 ntTSL 5 BASIC8.04□□□□□ -1.12
SCAPERQ9BY12 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
SCAPERQ9BY12 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
SCAPERQ9BY12 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC8.04□□□□□ -1.12
SCAPERQ9BY12 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
SCAPERQ9BY12 MIR600-201ENST00000385007 98 ntBASIC8.03□□□□□ -1.12
SCAPERQ9BY12 RPL23AP17-201ENST00000401064 499 ntBASIC8.03□□□□□ -1.12
SCAPERQ9BY12 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC8.03□□□□□ -1.12
SCAPERQ9BY12 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC8.03□□□□□ -1.12
SCAPERQ9BY12 KRTAP5-14P-201ENST00000502328 121 ntBASIC8.03□□□□□ -1.12
SCAPERQ9BY12 AP006289.1-201ENST00000538089 277 ntBASIC8.03□□□□□ -1.12
SCAPERQ9BY12 MIR5096-201ENST00000583713 70 ntBASIC8.03□□□□□ -1.12
SCAPERQ9BY12 AC009704.2-201ENST00000618739 483 ntBASIC8.03□□□□□ -1.12
SCAPERQ9BY12 AC012414.7-202ENST00000622705 1090 ntBASIC8.03□□□□□ -1.12
SCAPERQ9BY12 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC8.03□□□□□ -1.12
SCAPERQ9BY12 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
SCAPERQ9BY12 AP000547.3-204ENST00000588548 2523 ntBASIC8.03□□□□□ -1.12
SCAPERQ9BY12 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
SCAPERQ9BY12 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
SCAPERQ9BY12 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC8.03□□□□□ -1.12
SCAPERQ9BY12 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
SCAPERQ9BY12 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
SCAPERQ9BY12 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC8.03□□□□□ -1.12
SCAPERQ9BY12 AC144833.1-201ENST00000567953 4089 ntBASIC8.03□□□□□ -1.12
SCAPERQ9BY12 AC009962.1-201ENST00000567327 3813 ntBASIC8.03□□□□□ -1.12
SCAPERQ9BY12 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC8.03□□□□□ -1.12
SCAPERQ9BY12 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
SCAPERQ9BY12 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC8.03□□□□□ -1.12
SCAPERQ9BY12 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC8.03□□□□□ -1.12
SCAPERQ9BY12 MIR1182-201ENST00000408363 97 ntBASIC8.03□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 176.1 ms