Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC8.69□□□□□ -1.02
IFT140Q96RY7 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC8.69□□□□□ -1.02
IFT140Q96RY7 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
IFT140Q96RY7 SNORA66-201ENST00000384792 133 ntBASIC8.69□□□□□ -1.02
IFT140Q96RY7 RPS17P17-201ENST00000419392 409 ntBASIC8.69□□□□□ -1.02
IFT140Q96RY7 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC8.69□□□□□ -1.02
IFT140Q96RY7 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC8.69□□□□□ -1.02
IFT140Q96RY7 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC8.69□□□□□ -1.02
IFT140Q96RY7 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
IFT140Q96RY7 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC8.69□□□□□ -1.02
IFT140Q96RY7 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
IFT140Q96RY7 MIR4301-201ENST00000577203 66 ntBASIC8.69□□□□□ -1.02
IFT140Q96RY7 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC8.69□□□□□ -1.02
IFT140Q96RY7 AC105254.2-201ENST00000603636 436 ntBASIC8.69□□□□□ -1.02
IFT140Q96RY7 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
IFT140Q96RY7 HEMGN-201ENST00000259456 2192 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
IFT140Q96RY7 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
IFT140Q96RY7 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
IFT140Q96RY7 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
IFT140Q96RY7 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
IFT140Q96RY7 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
IFT140Q96RY7 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC8.68□□□□□ -1.02
IFT140Q96RY7 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
IFT140Q96RY7 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
IFT140Q96RY7 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
IFT140Q96RY7 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
IFT140Q96RY7 RNA5SP388-201ENST00000362584 119 ntBASIC8.68□□□□□ -1.02
IFT140Q96RY7 RNA5SP90-201ENST00000364801 99 ntBASIC8.68□□□□□ -1.02
IFT140Q96RY7 RNU4-25P-201ENST00000410569 230 ntBASIC8.68□□□□□ -1.02
IFT140Q96RY7 OR7E125P-201ENST00000443450 846 ntBASIC8.68□□□□□ -1.02
IFT140Q96RY7 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC8.68□□□□□ -1.02
IFT140Q96RY7 PPIAP21-201ENST00000464473 501 ntBASIC8.68□□□□□ -1.02
IFT140Q96RY7 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC8.68□□□□□ -1.02
IFT140Q96RY7 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC8.68□□□□□ -1.02
IFT140Q96RY7 TVP23CP2-201ENST00000571473 623 ntBASIC8.68□□□□□ -1.02
IFT140Q96RY7 AC125494.2-201ENST00000602431 657 ntBASIC8.68□□□□□ -1.02
IFT140Q96RY7 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
IFT140Q96RY7 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
IFT140Q96RY7 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC8.68□□□□□ -1.02
IFT140Q96RY7 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
IFT140Q96RY7 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
IFT140Q96RY7 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
IFT140Q96RY7 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC8.67□□□□□ -1.02
IFT140Q96RY7 SNORA57.1-201ENST00000391227 145 ntBASIC8.67□□□□□ -1.02
IFT140Q96RY7 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC8.67□□□□□ -1.02
IFT140Q96RY7 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC8.67□□□□□ -1.02
IFT140Q96RY7 RN7SL604P-201ENST00000492589 296 ntBASIC8.67□□□□□ -1.02
IFT140Q96RY7 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC8.67□□□□□ -1.02
IFT140Q96RY7 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC8.67□□□□□ -1.02
IFT140Q96RY7 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC8.67□□□□□ -1.02
IFT140Q96RY7 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC8.67□□□□□ -1.02
IFT140Q96RY7 MIR6830-201ENST00000636015 70 ntBASIC8.67□□□□□ -1.02
IFT140Q96RY7 OR5AU1-202ENST00000641039 8232 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
IFT140Q96RY7 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC8.67□□□□□ -1.02
IFT140Q96RY7 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC8.67□□□□□ -1.02
IFT140Q96RY7 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC8.67□□□□□ -1.02
IFT140Q96RY7 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC8.66□□□□□ -1.02
IFT140Q96RY7 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
IFT140Q96RY7 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
IFT140Q96RY7 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
IFT140Q96RY7 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
IFT140Q96RY7 WBP11P1-201ENST00000562560 1931 ntBASIC8.66□□□□□ -1.02
IFT140Q96RY7 BX510359.2-201ENST00000417920 305 ntBASIC8.66□□□□□ -1.02
IFT140Q96RY7 AL137845.2-201ENST00000444292 988 ntBASIC8.66□□□□□ -1.02
IFT140Q96RY7 AL354714.3-201ENST00000447284 493 ntBASIC8.66□□□□□ -1.02
IFT140Q96RY7 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC8.66□□□□□ -1.02
IFT140Q96RY7 AC021483.2-201ENST00000567415 758 ntBASIC8.66□□□□□ -1.02
IFT140Q96RY7 BNIP3P33-201ENST00000598912 569 ntBASIC8.66□□□□□ -1.02
IFT140Q96RY7 AC005962.2-201ENST00000611427 652 ntBASIC8.66□□□□□ -1.02
IFT140Q96RY7 UGP2-232ENST00000640075 567 ntTSL 5 BASIC8.66□□□□□ -1.02
IFT140Q96RY7 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
IFT140Q96RY7 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC8.66□□□□□ -1.02
IFT140Q96RY7 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
IFT140Q96RY7 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC8.66□□□□□ -1.02
IFT140Q96RY7 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC8.66□□□□□ -1.02
IFT140Q96RY7 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC8.66□□□□□ -1.02
IFT140Q96RY7 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC8.66□□□□□ -1.02
IFT140Q96RY7 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
IFT140Q96RY7 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC8.66□□□□□ -1.02
IFT140Q96RY7 ETV1-210ENST00000430479 6740 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
IFT140Q96RY7 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
IFT140Q96RY7 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC8.66□□□□□ -1.02
IFT140Q96RY7 IQCB2P-201ENST00000401788 1633 ntBASIC8.65□□□□□ -1.02
IFT140Q96RY7 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
IFT140Q96RY7 AC005225.5-201ENST00000623547 2225 ntBASIC8.65□□□□□ -1.02
IFT140Q96RY7 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC8.65□□□□□ -1.02
IFT140Q96RY7 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
IFT140Q96RY7 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC8.65□□□□□ -1.02
IFT140Q96RY7 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC8.65□□□□□ -1.02
IFT140Q96RY7 SNORD125-201ENST00000459538 96 ntBASIC8.65□□□□□ -1.02
IFT140Q96RY7 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC8.65□□□□□ -1.02
IFT140Q96RY7 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC8.65□□□□□ -1.02
IFT140Q96RY7 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
IFT140Q96RY7 MLECP1-201ENST00000615893 709 ntBASIC8.65□□□□□ -1.02
IFT140Q96RY7 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC8.65□□□□□ -1.02
IFT140Q96RY7 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
IFT140Q96RY7 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC8.65□□□□□ -1.02
IFT140Q96RY7 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC8.65□□□□□ -1.03
IFT140Q96RY7 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
IFT140Q96RY7 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms