Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.68□□□□□ -1.5
RTP4Q96DX8 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RTP4Q96DX8 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.68□□□□□ -1.5
RTP4Q96DX8 SAMMSON-210ENST00000641260 1308 ntBASIC5.68□□□□□ -1.5
RTP4Q96DX8 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
RTP4Q96DX8 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RTP4Q96DX8 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.68□□□□□ -1.5
RTP4Q96DX8 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RTP4Q96DX8 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.68□□□□□ -1.5
RTP4Q96DX8 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RTP4Q96DX8 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RTP4Q96DX8 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.67□□□□□ -1.5
RTP4Q96DX8 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
RTP4Q96DX8 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
RTP4Q96DX8 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RTP4Q96DX8 AL137141.1-201ENST00000624622 4836 ntBASIC5.67□□□□□ -1.5
RTP4Q96DX8 TET1P1-201ENST00000426627 2301 ntBASIC5.67□□□□□ -1.5
RTP4Q96DX8 MT-RNR1-201ENST00000389680 954 ntBASIC5.67□□□□□ -1.5
RTP4Q96DX8 PPIAP9-201ENST00000403866 498 ntBASIC5.67□□□□□ -1.5
RTP4Q96DX8 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.67□□□□□ -1.5
RTP4Q96DX8 RPL34P3-201ENST00000421454 338 ntBASIC5.67□□□□□ -1.5
RTP4Q96DX8 AC113412.1-201ENST00000425840 504 ntBASIC5.67□□□□□ -1.5
RTP4Q96DX8 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.67□□□□□ -1.5
RTP4Q96DX8 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.67□□□□□ -1.5
RTP4Q96DX8 SCAND3P1-201ENST00000439854 1060 ntBASIC5.67□□□□□ -1.5
RTP4Q96DX8 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC5.67□□□□□ -1.5
RTP4Q96DX8 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC5.67□□□□□ -1.5
RTP4Q96DX8 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RTP4Q96DX8 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
RTP4Q96DX8 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.67□□□□□ -1.5
RTP4Q96DX8 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.67□□□□□ -1.5
RTP4Q96DX8 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC5.67□□□□□ -1.5
RTP4Q96DX8 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.67□□□□□ -1.5
RTP4Q96DX8 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.67□□□□□ -1.5
RTP4Q96DX8 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.67□□□□□ -1.5
RTP4Q96DX8 uc_338.7-201ENST00000621834 124 ntBASIC5.67□□□□□ -1.5
RTP4Q96DX8 MTCO1P1-201ENST00000624263 1081 ntBASIC5.67□□□□□ -1.5
RTP4Q96DX8 CGA-206ENST00000630630 832 ntTSL 2 BASIC5.67□□□□□ -1.5
RTP4Q96DX8 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.67□□□□□ -1.5
RTP4Q96DX8 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.67□□□□□ -1.5
RTP4Q96DX8 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.67□□□□□ -1.5
RTP4Q96DX8 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC5.67□□□□□ -1.5
RTP4Q96DX8 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RTP4Q96DX8 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
RTP4Q96DX8 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RTP4Q96DX8 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RTP4Q96DX8 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
RTP4Q96DX8 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
RTP4Q96DX8 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
RTP4Q96DX8 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
RTP4Q96DX8 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
RTP4Q96DX8 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC5.66□□□□□ -1.5
RTP4Q96DX8 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RTP4Q96DX8 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RTP4Q96DX8 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
RTP4Q96DX8 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RTP4Q96DX8 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
RTP4Q96DX8 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.66□□□□□ -1.5
RTP4Q96DX8 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RTP4Q96DX8 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RTP4Q96DX8 RNA5SP394-201ENST00000364216 119 ntBASIC5.66□□□□□ -1.5
RTP4Q96DX8 GTF3AP1-201ENST00000416942 1004 ntBASIC5.66□□□□□ -1.5
RTP4Q96DX8 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.66□□□□□ -1.5
RTP4Q96DX8 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.66□□□□□ -1.5
RTP4Q96DX8 AC110749.1-201ENST00000462007 357 ntBASIC5.66□□□□□ -1.5
RTP4Q96DX8 AC018635.1-201ENST00000468292 1030 ntBASIC5.66□□□□□ -1.5
RTP4Q96DX8 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
RTP4Q96DX8 RPS26P39-201ENST00000469206 341 ntBASIC5.66□□□□□ -1.5
RTP4Q96DX8 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC5.66□□□□□ -1.5
RTP4Q96DX8 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC5.66□□□□□ -1.5
RTP4Q96DX8 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC5.66□□□□□ -1.5
RTP4Q96DX8 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RTP4Q96DX8 ATP5LP3-201ENST00000514223 304 ntBASIC5.66□□□□□ -1.5
RTP4Q96DX8 RNA5SP362-201ENST00000516048 118 ntBASIC5.66□□□□□ -1.5
RTP4Q96DX8 RNU6-615P-201ENST00000516065 106 ntBASIC5.66□□□□□ -1.5
RTP4Q96DX8 RN7SKP157-201ENST00000516174 282 ntBASIC5.66□□□□□ -1.5
RTP4Q96DX8 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC5.66□□□□□ -1.5
RTP4Q96DX8 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC5.66□□□□□ -1.5
RTP4Q96DX8 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.66□□□□□ -1.5
RTP4Q96DX8 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.66□□□□□ -1.5
RTP4Q96DX8 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RTP4Q96DX8 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC5.66□□□□□ -1.5
RTP4Q96DX8 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.66□□□□□ -1.5
RTP4Q96DX8 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.66□□□□□ -1.5
RTP4Q96DX8 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.66□□□□□ -1.5
RTP4Q96DX8 AC092944.2-201ENST00000605443 889 ntBASIC5.66□□□□□ -1.5
RTP4Q96DX8 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.66□□□□□ -1.5
RTP4Q96DX8 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
RTP4Q96DX8 AC027279.1-201ENST00000568885 4284 ntBASIC5.66□□□□□ -1.5
RTP4Q96DX8 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
RTP4Q96DX8 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC5.66□□□□□ -1.5
RTP4Q96DX8 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RTP4Q96DX8 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RTP4Q96DX8 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RTP4Q96DX8 AL449283.1-201ENST00000602631 3403 ntBASIC5.65□□□□□ -1.5
RTP4Q96DX8 AP001029.2-203ENST00000589795 4910 ntBASIC5.65□□□□□ -1.5
RTP4Q96DX8 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.65□□□□□ -1.5
RTP4Q96DX8 Z83820.1-201ENST00000456978 1499 ntBASIC5.65□□□□□ -1.5
RTP4Q96DX8 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.65□□□□□ -1.5
RTP4Q96DX8 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms