Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.47□□□□□ -1.53
VPS33AQ96AX1 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.47□□□□□ -1.53
VPS33AQ96AX1 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.47□□□□□ -1.53
VPS33AQ96AX1 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC5.47□□□□□ -1.53
VPS33AQ96AX1 uc_338.29-201ENST00000615099 168 ntBASIC5.47□□□□□ -1.53
VPS33AQ96AX1 AP003499.2-201ENST00000624100 483 ntBASIC5.47□□□□□ -1.53
VPS33AQ96AX1 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
VPS33AQ96AX1 AC017002.4-201ENST00000604721 1525 ntBASIC5.47□□□□□ -1.53
VPS33AQ96AX1 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
VPS33AQ96AX1 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.47□□□□□ -1.53
VPS33AQ96AX1 ABCC13-202ENST00000463099 3842 ntBASIC5.47□□□□□ -1.53
VPS33AQ96AX1 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
VPS33AQ96AX1 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.47□□□□□ -1.53
VPS33AQ96AX1 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
VPS33AQ96AX1 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.46□□□□□ -1.53
VPS33AQ96AX1 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
VPS33AQ96AX1 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
VPS33AQ96AX1 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
VPS33AQ96AX1 AC027228.2-201ENST00000567141 2154 ntBASIC5.46□□□□□ -1.53
VPS33AQ96AX1 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.53
VPS33AQ96AX1 AC018809.2-201ENST00000602436 3823 ntBASIC5.46□□□□□ -1.53
VPS33AQ96AX1 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
VPS33AQ96AX1 AL354854.1-201ENST00000455940 1363 ntBASIC5.46□□□□□ -1.54
VPS33AQ96AX1 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
VPS33AQ96AX1 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
VPS33AQ96AX1 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.46□□□□□ -1.54
VPS33AQ96AX1 MIR551B-201ENST00000384984 96 ntBASIC5.46□□□□□ -1.54
VPS33AQ96AX1 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
VPS33AQ96AX1 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
VPS33AQ96AX1 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
VPS33AQ96AX1 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
VPS33AQ96AX1 RN7SKP146-201ENST00000410242 334 ntBASIC5.46□□□□□ -1.54
VPS33AQ96AX1 RPL26P37-201ENST00000411983 438 ntBASIC5.46□□□□□ -1.54
VPS33AQ96AX1 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.46□□□□□ -1.54
VPS33AQ96AX1 AL133482.1-201ENST00000415988 498 ntBASIC5.46□□□□□ -1.54
VPS33AQ96AX1 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.46□□□□□ -1.54
VPS33AQ96AX1 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.46□□□□□ -1.54
VPS33AQ96AX1 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.46□□□□□ -1.54
VPS33AQ96AX1 OR6K4P-201ENST00000423179 955 ntBASIC5.46□□□□□ -1.54
VPS33AQ96AX1 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC5.46□□□□□ -1.54
VPS33AQ96AX1 AL136231.1-201ENST00000429407 730 ntBASIC5.46□□□□□ -1.54
VPS33AQ96AX1 MTND4LP14-201ENST00000429447 288 ntBASIC5.46□□□□□ -1.54
VPS33AQ96AX1 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
VPS33AQ96AX1 AP000936.3-201ENST00000438127 255 ntBASIC5.46□□□□□ -1.54
VPS33AQ96AX1 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC5.46□□□□□ -1.54
VPS33AQ96AX1 AC093166.4-201ENST00000457867 318 ntBASIC5.46□□□□□ -1.54
VPS33AQ96AX1 SNORD125-201ENST00000459538 96 ntBASIC5.46□□□□□ -1.54
VPS33AQ96AX1 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC5.46□□□□□ -1.54
VPS33AQ96AX1 AC092865.4-201ENST00000477936 615 ntBASIC5.46□□□□□ -1.54
VPS33AQ96AX1 AC020779.1-201ENST00000478757 796 ntBASIC5.46□□□□□ -1.54
VPS33AQ96AX1 RPS27P20-201ENST00000492051 246 ntBASIC5.46□□□□□ -1.54
VPS33AQ96AX1 RPSAP51-201ENST00000497462 645 ntBASIC5.46□□□□□ -1.54
VPS33AQ96AX1 AC021087.2-201ENST00000504656 1203 ntBASIC5.46□□□□□ -1.54
VPS33AQ96AX1 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.46□□□□□ -1.54
VPS33AQ96AX1 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.46□□□□□ -1.54
VPS33AQ96AX1 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC5.46□□□□□ -1.54
VPS33AQ96AX1 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.46□□□□□ -1.54
VPS33AQ96AX1 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.46□□□□□ -1.54
VPS33AQ96AX1 CCDC58P1-201ENST00000578567 430 ntBASIC5.46□□□□□ -1.54
VPS33AQ96AX1 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC5.46□□□□□ -1.54
VPS33AQ96AX1 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
VPS33AQ96AX1 MIR6774-201ENST00000614651 70 ntBASIC5.46□□□□□ -1.54
VPS33AQ96AX1 AC004801.6-201ENST00000616571 978 ntBASIC5.46□□□□□ -1.54
VPS33AQ96AX1 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC5.46□□□□□ -1.54
VPS33AQ96AX1 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.46□□□□□ -1.54
VPS33AQ96AX1 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
VPS33AQ96AX1 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.46□□□□□ -1.54
VPS33AQ96AX1 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.46□□□□□ -1.54
VPS33AQ96AX1 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
VPS33AQ96AX1 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
VPS33AQ96AX1 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
VPS33AQ96AX1 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.45□□□□□ -1.54
VPS33AQ96AX1 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.45□□□□□ -1.54
VPS33AQ96AX1 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
VPS33AQ96AX1 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.45□□□□□ -1.54
VPS33AQ96AX1 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
VPS33AQ96AX1 AC092681.1-201ENST00000297369 291 ntBASIC5.45□□□□□ -1.54
VPS33AQ96AX1 MIR130A-201ENST00000385274 89 ntBASIC5.45□□□□□ -1.54
VPS33AQ96AX1 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
VPS33AQ96AX1 AC005042.1-201ENST00000393397 800 ntBASIC5.45□□□□□ -1.54
VPS33AQ96AX1 AL354890.1-201ENST00000413730 346 ntBASIC5.45□□□□□ -1.54
VPS33AQ96AX1 AL590806.1-201ENST00000415818 853 ntBASIC5.45□□□□□ -1.54
VPS33AQ96AX1 AC019205.1-201ENST00000421830 730 ntBASIC5.45□□□□□ -1.54
VPS33AQ96AX1 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.45□□□□□ -1.54
VPS33AQ96AX1 AC113412.1-201ENST00000425840 504 ntBASIC5.45□□□□□ -1.54
VPS33AQ96AX1 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
VPS33AQ96AX1 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.45□□□□□ -1.54
VPS33AQ96AX1 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.45□□□□□ -1.54
VPS33AQ96AX1 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC5.45□□□□□ -1.54
VPS33AQ96AX1 AL035551.1-201ENST00000446931 348 ntBASIC5.45□□□□□ -1.54
VPS33AQ96AX1 AL157827.1-201ENST00000447622 132 ntBASIC5.45□□□□□ -1.54
VPS33AQ96AX1 CFL1P4-201ENST00000451536 498 ntBASIC5.45□□□□□ -1.54
VPS33AQ96AX1 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC5.45□□□□□ -1.54
VPS33AQ96AX1 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
VPS33AQ96AX1 RPS17P5-201ENST00000498293 408 ntBASIC5.45□□□□□ -1.54
VPS33AQ96AX1 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC5.45□□□□□ -1.54
VPS33AQ96AX1 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.45□□□□□ -1.54
VPS33AQ96AX1 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.45□□□□□ -1.54
VPS33AQ96AX1 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.45□□□□□ -1.54
VPS33AQ96AX1 IGLV3-30-201ENST00000524362 298 ntBASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms