Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
CDH11P55287 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CDH11P55287 AC120036.2-201ENST00000509729 1474 ntBASIC5.2□□□□□ -1.58
CDH11P55287 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
CDH11P55287 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.2□□□□□ -1.58
CDH11P55287 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
CDH11P55287 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.2□□□□□ -1.58
CDH11P55287 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
CDH11P55287 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.2□□□□□ -1.58
CDH11P55287 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.2□□□□□ -1.58
CDH11P55287 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CDH11P55287 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CDH11P55287 Y_RNA.110-201ENST00000363220 99 ntBASIC5.2□□□□□ -1.58
CDH11P55287 RN7SKP69-201ENST00000365390 305 ntBASIC5.2□□□□□ -1.58
CDH11P55287 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC5.2□□□□□ -1.58
CDH11P55287 METTL5-204ENST00000409340 472 ntTSL 5 BASIC5.2□□□□□ -1.58
CDH11P55287 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.2□□□□□ -1.58
CDH11P55287 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.2□□□□□ -1.58
CDH11P55287 AC017019.1-201ENST00000426129 261 ntBASIC5.2□□□□□ -1.58
CDH11P55287 AC104843.2-201ENST00000427666 297 ntBASIC5.2□□□□□ -1.58
CDH11P55287 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC5.2□□□□□ -1.58
CDH11P55287 AL590762.3-201ENST00000436372 640 ntBASIC5.2□□□□□ -1.58
CDH11P55287 NDUFS5P5-201ENST00000437256 321 ntBASIC5.2□□□□□ -1.58
CDH11P55287 PCBP2P1-201ENST00000437262 977 ntBASIC5.2□□□□□ -1.58
CDH11P55287 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC5.2□□□□□ -1.58
CDH11P55287 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.2□□□□□ -1.58
CDH11P55287 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CDH11P55287 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.2□□□□□ -1.58
CDH11P55287 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC5.2□□□□□ -1.58
CDH11P55287 AC011476.1-201ENST00000466725 307 ntBASIC5.2□□□□□ -1.58
CDH11P55287 AL122020.1-201ENST00000472287 459 ntBASIC5.2□□□□□ -1.58
CDH11P55287 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
CDH11P55287 AC020937.1-201ENST00000519677 1013 ntBASIC5.2□□□□□ -1.58
CDH11P55287 MTND1P36-201ENST00000522384 936 ntBASIC5.2□□□□□ -1.58
CDH11P55287 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.2□□□□□ -1.58
CDH11P55287 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.2□□□□□ -1.58
CDH11P55287 RN7SL753P-201ENST00000581238 290 ntBASIC5.2□□□□□ -1.58
CDH11P55287 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.2□□□□□ -1.58
CDH11P55287 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.2□□□□□ -1.58
CDH11P55287 AC027243.2-201ENST00000602530 724 ntBASIC5.2□□□□□ -1.58
CDH11P55287 AL022394.1-201ENST00000606979 292 ntBASIC5.2□□□□□ -1.58
CDH11P55287 MIR6809-201ENST00000612189 116 ntBASIC5.2□□□□□ -1.58
CDH11P55287 AL035661.1-201ENST00000620459 1144 ntBASIC5.2□□□□□ -1.58
CDH11P55287 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.2□□□□□ -1.58
CDH11P55287 AC103703.1-201ENST00000634783 663 ntBASIC5.2□□□□□ -1.58
CDH11P55287 MIR4302-201ENST00000638058 60 ntBASIC5.2□□□□□ -1.58
CDH11P55287 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.2□□□□□ -1.58
CDH11P55287 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CDH11P55287 RBPJP7-201ENST00000442803 1447 ntBASIC5.2□□□□□ -1.58
CDH11P55287 RBPJP5-201ENST00000449433 1447 ntBASIC5.2□□□□□ -1.58
CDH11P55287 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.2□□□□□ -1.58
CDH11P55287 AC007938.2-201ENST00000604666 2634 ntBASIC5.2□□□□□ -1.58
CDH11P55287 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CDH11P55287 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CDH11P55287 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CDH11P55287 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
CDH11P55287 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.19□□□□□ -1.58
CDH11P55287 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
CDH11P55287 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CDH11P55287 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.19□□□□□ -1.58
CDH11P55287 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CDH11P55287 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
CDH11P55287 AC027088.4-201ENST00000611559 1947 ntBASIC5.19□□□□□ -1.58
CDH11P55287 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.19□□□□□ -1.58
CDH11P55287 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CDH11P55287 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CDH11P55287 AP001029.2-203ENST00000589795 4910 ntBASIC5.19□□□□□ -1.58
CDH11P55287 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CDH11P55287 TMSB4XP4-201ENST00000323496 618 ntBASIC5.19□□□□□ -1.58
CDH11P55287 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.19□□□□□ -1.58
CDH11P55287 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
CDH11P55287 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
CDH11P55287 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
CDH11P55287 RNA5SP178-201ENST00000410380 128 ntBASIC5.19□□□□□ -1.58
CDH11P55287 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.19□□□□□ -1.58
CDH11P55287 AL035660.1-201ENST00000422041 222 ntBASIC5.19□□□□□ -1.58
CDH11P55287 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.19□□□□□ -1.58
CDH11P55287 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC5.19□□□□□ -1.58
CDH11P55287 MTND6P12-201ENST00000428247 522 ntBASIC5.19□□□□□ -1.58
CDH11P55287 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC5.19□□□□□ -1.58
CDH11P55287 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC5.19□□□□□ -1.58
CDH11P55287 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.19□□□□□ -1.58
CDH11P55287 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.19□□□□□ -1.58
CDH11P55287 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.19□□□□□ -1.58
CDH11P55287 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC5.19□□□□□ -1.58
CDH11P55287 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.19□□□□□ -1.58
CDH11P55287 AL157777.1-201ENST00000468100 304 ntBASIC5.19□□□□□ -1.58
CDH11P55287 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC5.19□□□□□ -1.58
CDH11P55287 PPIAP19-201ENST00000486414 492 ntBASIC5.19□□□□□ -1.58
CDH11P55287 NPM1P28-201ENST00000492269 840 ntBASIC5.19□□□□□ -1.58
CDH11P55287 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.19□□□□□ -1.58
CDH11P55287 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC5.19□□□□□ -1.58
CDH11P55287 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
CDH11P55287 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.19□□□□□ -1.58
CDH11P55287 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.19□□□□□ -1.58
CDH11P55287 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.19□□□□□ -1.58
CDH11P55287 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.19□□□□□ -1.58
CDH11P55287 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.19□□□□□ -1.58
CDH11P55287 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.19□□□□□ -1.58
CDH11P55287 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms