Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
EPHB3P54753 UGP2-232ENST00000640075 567 ntTSL 5 BASIC6.64□□□□□ -1.35
EPHB3P54753 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
EPHB3P54753 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC6.64□□□□□ -1.35
EPHB3P54753 AC092451.3-201ENST00000625067 1343 ntBASIC6.64□□□□□ -1.35
EPHB3P54753 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.64□□□□□ -1.35
EPHB3P54753 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
EPHB3P54753 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC6.64□□□□□ -1.35
EPHB3P54753 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC6.64□□□□□ -1.35
EPHB3P54753 AC025809.2-201ENST00000625085 1802 ntBASIC6.64□□□□□ -1.35
EPHB3P54753 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC6.64□□□□□ -1.35
EPHB3P54753 TEK-204ENST00000519097 3836 ntTSL 2 BASIC6.64□□□□□ -1.35
EPHB3P54753 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
EPHB3P54753 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
EPHB3P54753 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC6.64□□□□□ -1.35
EPHB3P54753 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.64□□□□□ -1.35
EPHB3P54753 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
EPHB3P54753 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC6.64□□□□□ -1.35
EPHB3P54753 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
EPHB3P54753 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
EPHB3P54753 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
EPHB3P54753 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC6.63□□□□□ -1.35
EPHB3P54753 MAPK10-383ENST00000642032 3390 ntBASIC6.63□□□□□ -1.35
EPHB3P54753 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
EPHB3P54753 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
EPHB3P54753 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
EPHB3P54753 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
EPHB3P54753 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC6.63□□□□□ -1.35
EPHB3P54753 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.63□□□□□ -1.35
EPHB3P54753 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
EPHB3P54753 RNU4-92P-201ENST00000363783 136 ntBASIC6.63□□□□□ -1.35
EPHB3P54753 RNU5E-4P-201ENST00000364931 120 ntBASIC6.63□□□□□ -1.35
EPHB3P54753 OR13C3-201ENST00000374781 1108 ntBASIC6.63□□□□□ -1.35
EPHB3P54753 SNORA51.9-201ENST00000384295 124 ntBASIC6.63□□□□□ -1.35
EPHB3P54753 RNA5SP122-201ENST00000384457 108 ntBASIC6.63□□□□□ -1.35
EPHB3P54753 AL021407.1-201ENST00000404531 386 ntBASIC6.63□□□□□ -1.35
EPHB3P54753 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC6.63□□□□□ -1.35
EPHB3P54753 AL049737.1-201ENST00000413920 1403 ntBASIC6.63□□□□□ -1.35
EPHB3P54753 TEX41-202ENST00000414256 604 ntTSL 5 BASIC6.63□□□□□ -1.35
EPHB3P54753 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC6.63□□□□□ -1.35
EPHB3P54753 MTND1P23-201ENST00000416931 372 ntBASIC6.63□□□□□ -1.35
EPHB3P54753 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
EPHB3P54753 PTP4A1P5-201ENST00000420305 455 ntBASIC6.63□□□□□ -1.35
EPHB3P54753 AL133325.1-201ENST00000421090 382 ntBASIC6.63□□□□□ -1.35
EPHB3P54753 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC6.63□□□□□ -1.35
EPHB3P54753 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC6.63□□□□□ -1.35
EPHB3P54753 VN1R42P-201ENST00000424651 344 ntBASIC6.63□□□□□ -1.35
EPHB3P54753 SCP2-206ENST00000430330 938 ntTSL 2 BASIC6.63□□□□□ -1.35
EPHB3P54753 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC6.63□□□□□ -1.35
EPHB3P54753 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC6.63□□□□□ -1.35
EPHB3P54753 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
EPHB3P54753 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC6.63□□□□□ -1.35
EPHB3P54753 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC6.63□□□□□ -1.35
EPHB3P54753 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC6.63□□□□□ -1.35
EPHB3P54753 MGAT2P1-201ENST00000449718 797 ntBASIC6.63□□□□□ -1.35
EPHB3P54753 VN1R38P-201ENST00000450265 887 ntBASIC6.63□□□□□ -1.35
EPHB3P54753 HIGD1AP16-201ENST00000450986 258 ntBASIC6.63□□□□□ -1.35
EPHB3P54753 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC6.63□□□□□ -1.35
EPHB3P54753 PPIAP27-201ENST00000453800 265 ntBASIC6.63□□□□□ -1.35
EPHB3P54753 PPIAP7-201ENST00000454070 489 ntBASIC6.63□□□□□ -1.35
EPHB3P54753 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC6.63□□□□□ -1.35
EPHB3P54753 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
EPHB3P54753 AC023194.2-201ENST00000465398 406 ntBASIC6.63□□□□□ -1.35
EPHB3P54753 AC098847.1-201ENST00000473094 348 ntBASIC6.63□□□□□ -1.35
EPHB3P54753 RPL34P33-201ENST00000486062 334 ntBASIC6.63□□□□□ -1.35
EPHB3P54753 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
EPHB3P54753 TPT1P3-201ENST00000492841 512 ntBASIC6.63□□□□□ -1.35
EPHB3P54753 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
EPHB3P54753 AC092104.1-201ENST00000497346 1441 ntBASIC6.63□□□□□ -1.35
EPHB3P54753 MTND6P8-201ENST00000503471 522 ntBASIC6.63□□□□□ -1.35
EPHB3P54753 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC6.63□□□□□ -1.35
EPHB3P54753 UGT2A3P7-201ENST00000510485 734 ntBASIC6.63□□□□□ -1.35
EPHB3P54753 GAPDHP71-201ENST00000511530 1003 ntBASIC6.63□□□□□ -1.35
EPHB3P54753 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC6.63□□□□□ -1.35
EPHB3P54753 OR5H7P-201ENST00000514084 930 ntBASIC6.63□□□□□ -1.35
EPHB3P54753 PRMT5P1-201ENST00000514351 598 ntBASIC6.63□□□□□ -1.35
EPHB3P54753 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC6.63□□□□□ -1.35
EPHB3P54753 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.63□□□□□ -1.35
EPHB3P54753 AP000620.1-201ENST00000527147 504 ntBASIC6.63□□□□□ -1.35
EPHB3P54753 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC6.63□□□□□ -1.35
EPHB3P54753 AP004609.2-201ENST00000532177 190 ntBASIC6.63□□□□□ -1.35
EPHB3P54753 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC6.63□□□□□ -1.35
EPHB3P54753 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC6.63□□□□□ -1.35
EPHB3P54753 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC6.63□□□□□ -1.35
EPHB3P54753 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC6.63□□□□□ -1.35
EPHB3P54753 AL354943.1-201ENST00000572103 781 ntBASIC6.63□□□□□ -1.35
EPHB3P54753 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
EPHB3P54753 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC6.63□□□□□ -1.35
EPHB3P54753 AL031985.2-201ENST00000600955 480 ntBASIC6.63□□□□□ -1.35
EPHB3P54753 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC6.63□□□□□ -1.35
EPHB3P54753 AC079880.2-201ENST00000603790 1213 ntBASIC6.63□□□□□ -1.35
EPHB3P54753 AC139493.1-201ENST00000604368 397 ntBASIC6.63□□□□□ -1.35
EPHB3P54753 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC6.63□□□□□ -1.35
EPHB3P54753 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
EPHB3P54753 AP003789.1-201ENST00000617737 605 ntBASIC6.63□□□□□ -1.35
EPHB3P54753 AC011815.2-201ENST00000618230 2021 ntBASIC6.63□□□□□ -1.35
EPHB3P54753 AC005332.9-201ENST00000620266 2921 ntBASIC6.63□□□□□ -1.35
EPHB3P54753 AC091932.2-201ENST00000623014 291 ntBASIC6.63□□□□□ -1.35
EPHB3P54753 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
EPHB3P54753 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms