Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
LIMK2P53671 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
LIMK2P53671 YES1P1-201ENST00000418510 1628 ntBASIC5.56□□□□□ -1.52
LIMK2P53671 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
LIMK2P53671 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
LIMK2P53671 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
LIMK2P53671 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
LIMK2P53671 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
LIMK2P53671 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.56□□□□□ -1.52
LIMK2P53671 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
LIMK2P53671 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.56□□□□□ -1.52
LIMK2P53671 RN7SKP162-201ENST00000363605 345 ntBASIC5.56□□□□□ -1.52
LIMK2P53671 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.56□□□□□ -1.52
LIMK2P53671 RPSAP35-201ENST00000413753 818 ntBASIC5.56□□□□□ -1.52
LIMK2P53671 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC5.56□□□□□ -1.52
LIMK2P53671 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.56□□□□□ -1.52
LIMK2P53671 VTI1BP4-201ENST00000427516 527 ntBASIC5.56□□□□□ -1.52
LIMK2P53671 AL136231.1-201ENST00000429407 730 ntBASIC5.56□□□□□ -1.52
LIMK2P53671 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.56□□□□□ -1.52
LIMK2P53671 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.56□□□□□ -1.52
LIMK2P53671 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.56□□□□□ -1.52
LIMK2P53671 RN7SL72P-201ENST00000460697 269 ntBASIC5.56□□□□□ -1.52
LIMK2P53671 SIAH1P1-201ENST00000479411 923 ntBASIC5.56□□□□□ -1.52
LIMK2P53671 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC5.56□□□□□ -1.52
LIMK2P53671 AC026782.2-201ENST00000510845 636 ntBASIC5.56□□□□□ -1.52
LIMK2P53671 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.56□□□□□ -1.52
LIMK2P53671 MRPS16P1-201ENST00000523462 412 ntBASIC5.56□□□□□ -1.52
LIMK2P53671 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.56□□□□□ -1.52
LIMK2P53671 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
LIMK2P53671 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC5.56□□□□□ -1.52
LIMK2P53671 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.56□□□□□ -1.52
LIMK2P53671 MIR4443-201ENST00000585052 53 ntBASIC5.56□□□□□ -1.52
LIMK2P53671 OR7E18P-201ENST00000592589 702 ntBASIC5.56□□□□□ -1.52
LIMK2P53671 SUMO2P15-201ENST00000604285 278 ntBASIC5.56□□□□□ -1.52
LIMK2P53671 AP005212.4-201ENST00000614206 710 ntBASIC5.56□□□□□ -1.52
LIMK2P53671 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.56□□□□□ -1.52
LIMK2P53671 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
LIMK2P53671 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.56□□□□□ -1.52
LIMK2P53671 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.56□□□□□ -1.52
LIMK2P53671 AC007842.1-201ENST00000597336 2039 ntBASIC5.56□□□□□ -1.52
LIMK2P53671 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.56□□□□□ -1.52
LIMK2P53671 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.56□□□□□ -1.52
LIMK2P53671 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
LIMK2P53671 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
LIMK2P53671 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
LIMK2P53671 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.56□□□□□ -1.52
LIMK2P53671 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
LIMK2P53671 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.56□□□□□ -1.52
LIMK2P53671 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
LIMK2P53671 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.55□□□□□ -1.52
LIMK2P53671 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.55□□□□□ -1.52
LIMK2P53671 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
LIMK2P53671 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
LIMK2P53671 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.55□□□□□ -1.52
LIMK2P53671 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
LIMK2P53671 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
LIMK2P53671 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
LIMK2P53671 AL009179.1-201ENST00000406085 265 ntBASIC5.55□□□□□ -1.52
LIMK2P53671 NPM1P4-201ENST00000414095 812 ntBASIC5.55□□□□□ -1.52
LIMK2P53671 AC016769.2-201ENST00000414815 475 ntBASIC5.55□□□□□ -1.52
LIMK2P53671 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC5.55□□□□□ -1.52
LIMK2P53671 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.55□□□□□ -1.52
LIMK2P53671 AC113412.1-201ENST00000425840 504 ntBASIC5.55□□□□□ -1.52
LIMK2P53671 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.55□□□□□ -1.52
LIMK2P53671 FMO7P-201ENST00000436045 768 ntBASIC5.55□□□□□ -1.52
LIMK2P53671 AC006335.2-201ENST00000437993 330 ntBASIC5.55□□□□□ -1.52
LIMK2P53671 SPRYD7P1-201ENST00000443861 570 ntBASIC5.55□□□□□ -1.52
LIMK2P53671 AL163193.1-201ENST00000444895 788 ntBASIC5.55□□□□□ -1.52
LIMK2P53671 CBX1P2-201ENST00000453841 458 ntBASIC5.55□□□□□ -1.52
LIMK2P53671 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.55□□□□□ -1.52
LIMK2P53671 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC5.55□□□□□ -1.52
LIMK2P53671 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.55□□□□□ -1.52
LIMK2P53671 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.55□□□□□ -1.52
LIMK2P53671 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.55□□□□□ -1.52
LIMK2P53671 BX510359.5-201ENST00000515651 304 ntBASIC5.55□□□□□ -1.52
LIMK2P53671 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.55□□□□□ -1.52
LIMK2P53671 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.55□□□□□ -1.52
LIMK2P53671 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.55□□□□□ -1.52
LIMK2P53671 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.55□□□□□ -1.52
LIMK2P53671 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.55□□□□□ -1.52
LIMK2P53671 AC051619.2-201ENST00000559063 397 ntBASIC5.55□□□□□ -1.52
LIMK2P53671 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.55□□□□□ -1.52
LIMK2P53671 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.55□□□□□ -1.52
LIMK2P53671 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
LIMK2P53671 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.55□□□□□ -1.52
LIMK2P53671 AC010615.3-201ENST00000597319 394 ntBASIC5.55□□□□□ -1.52
LIMK2P53671 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.55□□□□□ -1.52
LIMK2P53671 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.55□□□□□ -1.52
LIMK2P53671 AC241377.1-201ENST00000619797 406 ntBASIC5.55□□□□□ -1.52
LIMK2P53671 AL390318.1-201ENST00000624564 687 ntBASIC5.55□□□□□ -1.52
LIMK2P53671 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
LIMK2P53671 AC093671.1-201ENST00000624981 2929 ntBASIC5.55□□□□□ -1.52
LIMK2P53671 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
LIMK2P53671 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
LIMK2P53671 AC144833.1-201ENST00000567953 4089 ntBASIC5.55□□□□□ -1.52
LIMK2P53671 AC012078.1-201ENST00000405035 1646 ntBASIC5.55□□□□□ -1.52
LIMK2P53671 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
LIMK2P53671 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
LIMK2P53671 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
LIMK2P53671 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms