Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CX3CR1P49238 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.83□□□□□ -1.64
CX3CR1P49238 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.83□□□□□ -1.64
CX3CR1P49238 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CX3CR1P49238 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CX3CR1P49238 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CX3CR1P49238 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CX3CR1P49238 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC4.82□□□□□ -1.64
CX3CR1P49238 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
CX3CR1P49238 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CX3CR1P49238 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC4.82□□□□□ -1.64
CX3CR1P49238 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CX3CR1P49238 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
CX3CR1P49238 RNA5SP394-201ENST00000364216 119 ntBASIC4.82□□□□□ -1.64
CX3CR1P49238 RNA5SP131-201ENST00000365452 119 ntBASIC4.82□□□□□ -1.64
CX3CR1P49238 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC4.82□□□□□ -1.64
CX3CR1P49238 AC007161.1-204ENST00000423039 460 ntBASIC4.82□□□□□ -1.64
CX3CR1P49238 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC4.82□□□□□ -1.64
CX3CR1P49238 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC4.82□□□□□ -1.64
CX3CR1P49238 DNAJA1P5-201ENST00000440278 943 ntBASIC4.82□□□□□ -1.64
CX3CR1P49238 TCEA1P3-201ENST00000443005 880 ntBASIC4.82□□□□□ -1.64
CX3CR1P49238 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC4.82□□□□□ -1.64
CX3CR1P49238 AP000547.1-201ENST00000454360 617 ntBASIC4.82□□□□□ -1.64
CX3CR1P49238 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC4.82□□□□□ -1.64
CX3CR1P49238 AC021106.1-201ENST00000509020 1058 ntBASIC4.82□□□□□ -1.64
CX3CR1P49238 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC4.82□□□□□ -1.64
CX3CR1P49238 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC4.82□□□□□ -1.64
CX3CR1P49238 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC4.82□□□□□ -1.64
CX3CR1P49238 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC4.82□□□□□ -1.64
CX3CR1P49238 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC4.82□□□□□ -1.64
CX3CR1P49238 GNG2-208ENST00000554875 430 ntTSL 5 BASIC4.82□□□□□ -1.64
CX3CR1P49238 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CX3CR1P49238 NMNAT1P5-201ENST00000559657 841 ntBASIC4.82□□□□□ -1.64
CX3CR1P49238 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC4.82□□□□□ -1.64
CX3CR1P49238 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC4.82□□□□□ -1.64
CX3CR1P49238 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
CX3CR1P49238 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC4.82□□□□□ -1.64
CX3CR1P49238 AL354950.1-201ENST00000614150 568 ntBASIC4.82□□□□□ -1.64
CX3CR1P49238 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC4.82□□□□□ -1.64
CX3CR1P49238 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC4.82□□□□□ -1.64
CX3CR1P49238 uc_338.7-201ENST00000621834 124 ntBASIC4.82□□□□□ -1.64
CX3CR1P49238 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC4.82□□□□□ -1.64
CX3CR1P49238 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC4.82□□□□□ -1.64
CX3CR1P49238 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CX3CR1P49238 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.82□□□□□ -1.64
CX3CR1P49238 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC4.82□□□□□ -1.64
CX3CR1P49238 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CX3CR1P49238 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CX3CR1P49238 AC010266.2-201ENST00000564741 3255 ntBASIC4.82□□□□□ -1.64
CX3CR1P49238 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CX3CR1P49238 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CX3CR1P49238 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
CX3CR1P49238 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CX3CR1P49238 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CX3CR1P49238 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC4.81□□□□□ -1.64
CX3CR1P49238 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CX3CR1P49238 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
CX3CR1P49238 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CX3CR1P49238 AC011755.1-201ENST00000623763 2049 ntBASIC4.81□□□□□ -1.64
CX3CR1P49238 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CX3CR1P49238 RNU6-249P-201ENST00000363016 102 ntBASIC4.81□□□□□ -1.64
CX3CR1P49238 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CX3CR1P49238 CDC123-202ENST00000378900 933 ntTSL 5 BASIC4.81□□□□□ -1.64
CX3CR1P49238 MIR551A-201ENST00000385042 96 ntBASIC4.81□□□□□ -1.64
CX3CR1P49238 PPIAP9-201ENST00000403866 498 ntBASIC4.81□□□□□ -1.64
CX3CR1P49238 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC4.81□□□□□ -1.64
CX3CR1P49238 MGAT2P2-201ENST00000427194 797 ntBASIC4.81□□□□□ -1.64
CX3CR1P49238 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC4.81□□□□□ -1.64
CX3CR1P49238 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC4.81□□□□□ -1.64
CX3CR1P49238 AC005297.1-201ENST00000444765 862 ntBASIC4.81□□□□□ -1.64
CX3CR1P49238 TAAR4P-201ENST00000454843 1039 ntBASIC4.81□□□□□ -1.64
CX3CR1P49238 OR2A1-AS1-202ENST00000467944 422 ntBASIC4.81□□□□□ -1.64
CX3CR1P49238 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC4.81□□□□□ -1.64
CX3CR1P49238 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC4.81□□□□□ -1.64
CX3CR1P49238 ENPP7P11-201ENST00000505915 627 ntBASIC4.81□□□□□ -1.64
CX3CR1P49238 AC109481.1-201ENST00000509173 282 ntBASIC4.81□□□□□ -1.64
CX3CR1P49238 AC091912.1-201ENST00000511351 248 ntBASIC4.81□□□□□ -1.64
CX3CR1P49238 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.81□□□□□ -1.64
CX3CR1P49238 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC4.81□□□□□ -1.64
CX3CR1P49238 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC4.81□□□□□ -1.64
CX3CR1P49238 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC4.81□□□□□ -1.64
CX3CR1P49238 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CX3CR1P49238 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CX3CR1P49238 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC4.81□□□□□ -1.64
CX3CR1P49238 AC107958.1-201ENST00000556576 290 ntBASIC4.81□□□□□ -1.64
CX3CR1P49238 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC4.81□□□□□ -1.64
CX3CR1P49238 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC4.81□□□□□ -1.64
CX3CR1P49238 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC4.81□□□□□ -1.64
CX3CR1P49238 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC4.81□□□□□ -1.64
CX3CR1P49238 CDC42EP3P1-201ENST00000601004 764 ntBASIC4.81□□□□□ -1.64
CX3CR1P49238 AC079315.1-201ENST00000602952 623 ntBASIC4.81□□□□□ -1.64
CX3CR1P49238 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC4.81□□□□□ -1.64
CX3CR1P49238 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC4.81□□□□□ -1.64
CX3CR1P49238 AP005431.1-201ENST00000618479 319 ntBASIC4.81□□□□□ -1.64
CX3CR1P49238 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CX3CR1P49238 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CX3CR1P49238 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.81□□□□□ -1.64
CX3CR1P49238 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CX3CR1P49238 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
CX3CR1P49238 AC006484.1-201ENST00000435086 1884 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms