Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
RFX1P22670 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC7.79□□□□□ -1.16
RFX1P22670 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
RFX1P22670 IGKV7-3-201ENST00000357453 298 ntBASIC7.79□□□□□ -1.16
RFX1P22670 FCAR-204ENST00000359272 828 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
RFX1P22670 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC7.79□□□□□ -1.16
RFX1P22670 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC7.79□□□□□ -1.16
RFX1P22670 RNU6-1042P-201ENST00000384204 107 ntBASIC7.79□□□□□ -1.16
RFX1P22670 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
RFX1P22670 GGA1-205ENST00000405147 575 ntTSL 4 BASIC7.79□□□□□ -1.16
RFX1P22670 AL136100.1-201ENST00000407696 330 ntBASIC7.79□□□□□ -1.16
RFX1P22670 LSM5-205ENST00000409952 687 ntTSL 4 BASIC7.79□□□□□ -1.16
RFX1P22670 RNU2-66P-201ENST00000410650 161 ntBASIC7.79□□□□□ -1.16
RFX1P22670 RN7SKP222-201ENST00000410651 315 ntBASIC7.79□□□□□ -1.16
RFX1P22670 RPS7P13-201ENST00000413955 498 ntBASIC7.79□□□□□ -1.16
RFX1P22670 AL596448.1-201ENST00000415024 392 ntBASIC7.79□□□□□ -1.16
RFX1P22670 RPL17P17-201ENST00000419491 557 ntBASIC7.79□□□□□ -1.16
RFX1P22670 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC7.79□□□□□ -1.16
RFX1P22670 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC7.79□□□□□ -1.16
RFX1P22670 UQCRHP1-204ENST00000424609 274 ntBASIC7.79□□□□□ -1.16
RFX1P22670 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC7.79□□□□□ -1.16
RFX1P22670 FGF12-202ENST00000430714 603 ntTSL 2 BASIC7.79□□□□□ -1.16
RFX1P22670 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC7.79□□□□□ -1.16
RFX1P22670 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC7.79□□□□□ -1.16
RFX1P22670 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC7.79□□□□□ -1.16
RFX1P22670 ST13P21-201ENST00000453250 1098 ntBASIC7.79□□□□□ -1.16
RFX1P22670 LINC01795-201ENST00000454367 813 ntTSL 3 BASIC7.79□□□□□ -1.16
RFX1P22670 AL133351.3-201ENST00000454998 193 ntBASIC7.79□□□□□ -1.16
RFX1P22670 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC7.79□□□□□ -1.16
RFX1P22670 MTAPP1-201ENST00000489154 819 ntBASIC7.79□□□□□ -1.16
RFX1P22670 AP005202.1-201ENST00000489915 867 ntBASIC7.79□□□□□ -1.16
RFX1P22670 MTND2P33-201ENST00000506452 1031 ntBASIC7.79□□□□□ -1.16
RFX1P22670 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC7.79□□□□□ -1.16
RFX1P22670 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
RFX1P22670 AC093281.2-201ENST00000510153 597 ntBASIC7.79□□□□□ -1.16
RFX1P22670 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC7.79□□□□□ -1.16
RFX1P22670 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC7.79□□□□□ -1.16
RFX1P22670 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC7.79□□□□□ -1.16
RFX1P22670 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC7.79□□□□□ -1.16
RFX1P22670 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC7.79□□□□□ -1.16
RFX1P22670 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC7.79□□□□□ -1.16
RFX1P22670 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
RFX1P22670 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC7.79□□□□□ -1.16
RFX1P22670 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC7.79□□□□□ -1.16
RFX1P22670 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC7.79□□□□□ -1.16
RFX1P22670 AC068135.2-201ENST00000569293 1028 ntBASIC7.79□□□□□ -1.16
RFX1P22670 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC7.79□□□□□ -1.16
RFX1P22670 ZNF397-211ENST00000592264 1104 ntTSL 3 BASIC7.79□□□□□ -1.16
RFX1P22670 PLEKHA3P1-201ENST00000598554 894 ntBASIC7.79□□□□□ -1.16
RFX1P22670 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
RFX1P22670 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC7.79□□□□□ -1.16
RFX1P22670 COX6CP16-201ENST00000603667 216 ntBASIC7.79□□□□□ -1.16
RFX1P22670 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC7.79□□□□□ -1.16
RFX1P22670 AC005332.6-201ENST00000613178 446 ntBASIC7.79□□□□□ -1.16
RFX1P22670 AC013476.2-201ENST00000614456 459 ntBASIC7.79□□□□□ -1.16
RFX1P22670 MIR7973-1-201ENST00000614683 76 ntBASIC7.79□□□□□ -1.16
RFX1P22670 AC026368.1-201ENST00000614934 690 ntBASIC7.79□□□□□ -1.16
RFX1P22670 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC7.79□□□□□ -1.16
RFX1P22670 uc_338.37-201ENST00000620113 186 ntBASIC7.79□□□□□ -1.16
RFX1P22670 AL009031.1-201ENST00000632346 1026 ntTSL 2 BASIC7.79□□□□□ -1.16
RFX1P22670 AC063952.1-203ENST00000634410 658 ntBASIC7.79□□□□□ -1.16
RFX1P22670 RMST-210ENST00000640149 2844 ntTSL 5 BASIC7.79□□□□□ -1.16
RFX1P22670 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
RFX1P22670 AL671511.1-201ENST00000425033 3458 ntTSL 2 BASIC7.79□□□□□ -1.16
RFX1P22670 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
RFX1P22670 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
RFX1P22670 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
RFX1P22670 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
RFX1P22670 NR1H4-206ENST00000548884 2884 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
RFX1P22670 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
RFX1P22670 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC7.79□□□□□ -1.16
RFX1P22670 DDX18P4-201ENST00000511690 1966 ntBASIC7.79□□□□□ -1.16
RFX1P22670 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
RFX1P22670 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
RFX1P22670 CFI-201ENST00000394634 2159 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
RFX1P22670 FBXW10-201ENST00000301938 3221 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
RFX1P22670 POT1-AS1-204ENST00000449642 3238 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
RFX1P22670 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
RFX1P22670 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC7.78□□□□□ -1.16
RFX1P22670 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
RFX1P22670 CASP10-203ENST00000313728 1521 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
RFX1P22670 TCP11X2-202ENST00000453326 1747 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
RFX1P22670 TCP11X1-201ENST00000597070 1747 ntTSL 2 BASIC7.78□□□□□ -1.16
RFX1P22670 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
RFX1P22670 EHHADH-201ENST00000231887 3850 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
RFX1P22670 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
RFX1P22670 MFSD8-217ENST00000641178 4374 ntBASIC7.78□□□□□ -1.16
RFX1P22670 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC7.78□□□□□ -1.16
RFX1P22670 OR2AH1P-202ENST00000641232 2744 ntBASIC7.78□□□□□ -1.16
RFX1P22670 BRINP3-201ENST00000367462 3142 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
RFX1P22670 ZNF603P-201ENST00000405613 487 ntBASIC7.78□□□□□ -1.16
RFX1P22670 MTND1P21-201ENST00000412991 285 ntBASIC7.78□□□□□ -1.16
RFX1P22670 AC004448.2-201ENST00000422360 586 ntBASIC7.78□□□□□ -1.16
RFX1P22670 RPS27AP7-201ENST00000422792 455 ntBASIC7.78□□□□□ -1.16
RFX1P22670 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC7.78□□□□□ -1.16
RFX1P22670 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
RFX1P22670 CYP4F34P-201ENST00000425951 481 ntBASIC7.78□□□□□ -1.16
RFX1P22670 AC010975.2-201ENST00000427781 588 ntBASIC7.78□□□□□ -1.16
RFX1P22670 TMX2P1-201ENST00000436507 708 ntBASIC7.78□□□□□ -1.16
RFX1P22670 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC7.78□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms