Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.75□□□□□ -1.49
APOEP02649 MIR6729-201ENST00000618194 65 ntBASIC5.75□□□□□ -1.49
APOEP02649 MIR8080-201ENST00000622224 89 ntBASIC5.75□□□□□ -1.49
APOEP02649 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.75□□□□□ -1.49
APOEP02649 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.75□□□□□ -1.49
APOEP02649 AC099654.11-201ENST00000638857 294 ntBASIC5.75□□□□□ -1.49
APOEP02649 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
APOEP02649 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
APOEP02649 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
APOEP02649 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.75□□□□□ -1.49
APOEP02649 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
APOEP02649 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
APOEP02649 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
APOEP02649 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
APOEP02649 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
APOEP02649 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.74□□□□□ -1.49
APOEP02649 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
APOEP02649 AC068870.1-201ENST00000563737 2455 ntBASIC5.74□□□□□ -1.49
APOEP02649 AC104964.3-201ENST00000606115 2860 ntBASIC5.74□□□□□ -1.49
APOEP02649 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.74□□□□□ -1.49
APOEP02649 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
APOEP02649 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
APOEP02649 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC5.74□□□□□ -1.49
APOEP02649 RNA5SP132-201ENST00000364725 118 ntBASIC5.74□□□□□ -1.49
APOEP02649 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
APOEP02649 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.74□□□□□ -1.49
APOEP02649 SNORA5.1-201ENST00000384275 131 ntBASIC5.74□□□□□ -1.49
APOEP02649 NACAP7-201ENST00000407371 609 ntBASIC5.74□□□□□ -1.49
APOEP02649 RIMKLBP2-201ENST00000424737 654 ntBASIC5.74□□□□□ -1.49
APOEP02649 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.74□□□□□ -1.49
APOEP02649 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
APOEP02649 AC083899.1-201ENST00000454465 3819 ntBASIC5.74□□□□□ -1.49
APOEP02649 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.74□□□□□ -1.49
APOEP02649 AC090638.1-201ENST00000498296 909 ntBASIC5.74□□□□□ -1.49
APOEP02649 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.74□□□□□ -1.49
APOEP02649 OR4A17P-201ENST00000526032 904 ntBASIC5.74□□□□□ -1.49
APOEP02649 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
APOEP02649 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.74□□□□□ -1.49
APOEP02649 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.74□□□□□ -1.49
APOEP02649 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.74□□□□□ -1.49
APOEP02649 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
APOEP02649 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
APOEP02649 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.74□□□□□ -1.49
APOEP02649 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
APOEP02649 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
APOEP02649 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.74□□□□□ -1.49
APOEP02649 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
APOEP02649 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
APOEP02649 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
APOEP02649 AC006206.1-201ENST00000544842 3387 ntBASIC5.73□□□□□ -1.49
APOEP02649 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
APOEP02649 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
APOEP02649 AC093591.2-201ENST00000565254 3843 ntBASIC5.73□□□□□ -1.49
APOEP02649 AC019072.1-201ENST00000604535 1551 ntBASIC5.73□□□□□ -1.49
APOEP02649 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
APOEP02649 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
APOEP02649 SNORA70.6-201ENST00000383934 134 ntBASIC5.73□□□□□ -1.49
APOEP02649 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
APOEP02649 AL133482.1-201ENST00000415988 498 ntBASIC5.73□□□□□ -1.49
APOEP02649 RPL6P21-201ENST00000418672 846 ntBASIC5.73□□□□□ -1.49
APOEP02649 AC007161.1-204ENST00000423039 460 ntBASIC5.73□□□□□ -1.49
APOEP02649 RPL7P56-201ENST00000429441 717 ntBASIC5.73□□□□□ -1.49
APOEP02649 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.73□□□□□ -1.49
APOEP02649 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.73□□□□□ -1.49
APOEP02649 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.73□□□□□ -1.49
APOEP02649 PSAT1P4-201ENST00000466500 526 ntBASIC5.73□□□□□ -1.49
APOEP02649 RN7SL188P-201ENST00000469842 285 ntBASIC5.73□□□□□ -1.49
APOEP02649 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.73□□□□□ -1.49
APOEP02649 EIF1P7-201ENST00000487533 337 ntBASIC5.73□□□□□ -1.49
APOEP02649 AC105420.1-201ENST00000504389 582 ntBASIC5.73□□□□□ -1.49
APOEP02649 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.73□□□□□ -1.49
APOEP02649 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.73□□□□□ -1.49
APOEP02649 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.73□□□□□ -1.49
APOEP02649 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.73□□□□□ -1.49
APOEP02649 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.73□□□□□ -1.49
APOEP02649 AC010245.2-201ENST00000606908 1167 ntBASIC5.73□□□□□ -1.49
APOEP02649 AC079395.2-201ENST00000610982 737 ntBASIC5.73□□□□□ -1.49
APOEP02649 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
APOEP02649 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
APOEP02649 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
APOEP02649 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
APOEP02649 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.73□□□□□ -1.49
APOEP02649 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.72□□□□□ -1.49
APOEP02649 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
APOEP02649 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
APOEP02649 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
APOEP02649 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
APOEP02649 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
APOEP02649 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
APOEP02649 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.72□□□□□ -1.49
APOEP02649 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
APOEP02649 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
APOEP02649 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.72□□□□□ -1.49
APOEP02649 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
APOEP02649 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
APOEP02649 RNA5SP234-201ENST00000363916 119 ntBASIC5.72□□□□□ -1.49
APOEP02649 MIR323B-201ENST00000385269 82 ntBASIC5.72□□□□□ -1.49
APOEP02649 AC079355.1-201ENST00000421770 223 ntBASIC5.72□□□□□ -1.49
APOEP02649 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.72□□□□□ -1.49
APOEP02649 AL359265.1-201ENST00000440296 795 ntBASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms