Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC6.25□□□□□ -1.41
COL2A1P02458 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC6.25□□□□□ -1.41
COL2A1P02458 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.25□□□□□ -1.41
COL2A1P02458 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC6.25□□□□□ -1.41
COL2A1P02458 MIR1182-201ENST00000408363 97 ntBASIC6.25□□□□□ -1.41
COL2A1P02458 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
COL2A1P02458 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC6.25□□□□□ -1.41
COL2A1P02458 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC6.25□□□□□ -1.41
COL2A1P02458 RPS3AP41-201ENST00000462701 778 ntBASIC6.25□□□□□ -1.41
COL2A1P02458 AC004980.4-201ENST00000513375 203 ntBASIC6.25□□□□□ -1.41
COL2A1P02458 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC6.25□□□□□ -1.41
COL2A1P02458 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC6.25□□□□□ -1.41
COL2A1P02458 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC6.25□□□□□ -1.41
COL2A1P02458 AL627230.1-201ENST00000613077 211 ntBASIC6.25□□□□□ -1.41
COL2A1P02458 AL591926.8-201ENST00000616876 211 ntBASIC6.25□□□□□ -1.41
COL2A1P02458 AC112694.2-201ENST00000623697 768 ntBASIC6.25□□□□□ -1.41
COL2A1P02458 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
COL2A1P02458 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC6.25□□□□□ -1.41
COL2A1P02458 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
COL2A1P02458 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.25□□□□□ -1.41
COL2A1P02458 SLC6A14-202ENST00000598581 4520 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
COL2A1P02458 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
COL2A1P02458 AC012618.3-205ENST00000637896 1496 ntBASIC6.25□□□□□ -1.41
COL2A1P02458 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
COL2A1P02458 ZNF365-204ENST00000395251 2695 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
COL2A1P02458 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
COL2A1P02458 AC144833.1-201ENST00000567953 4089 ntBASIC6.24□□□□□ -1.41
COL2A1P02458 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
COL2A1P02458 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
COL2A1P02458 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
COL2A1P02458 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
COL2A1P02458 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
COL2A1P02458 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
COL2A1P02458 GNAS-202ENST00000306090 477 ntTSL 5 BASIC6.24□□□□□ -1.41
COL2A1P02458 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC6.24□□□□□ -1.41
COL2A1P02458 AC124944.2-201ENST00000429866 1242 ntBASIC6.24□□□□□ -1.41
COL2A1P02458 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC6.24□□□□□ -1.41
COL2A1P02458 AC011753.3-201ENST00000443436 406 ntBASIC6.24□□□□□ -1.41
COL2A1P02458 AP000797.2-201ENST00000475768 606 ntBASIC6.24□□□□□ -1.41
COL2A1P02458 RPL7P40-201ENST00000481703 745 ntBASIC6.24□□□□□ -1.41
COL2A1P02458 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC6.24□□□□□ -1.41
COL2A1P02458 RPS24P16-201ENST00000497294 392 ntBASIC6.24□□□□□ -1.41
COL2A1P02458 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC6.24□□□□□ -1.41
COL2A1P02458 RN7SKP147-201ENST00000517154 244 ntBASIC6.24□□□□□ -1.41
COL2A1P02458 OR4A43P-201ENST00000532938 908 ntBASIC6.24□□□□□ -1.41
COL2A1P02458 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC6.24□□□□□ -1.41
COL2A1P02458 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC6.24□□□□□ -1.41
COL2A1P02458 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC6.24□□□□□ -1.41
COL2A1P02458 uc_338.7-201ENST00000621834 124 ntBASIC6.24□□□□□ -1.41
COL2A1P02458 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC6.24□□□□□ -1.41
COL2A1P02458 AC093829.1-201ENST00000506662 1618 ntBASIC6.24□□□□□ -1.41
COL2A1P02458 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
COL2A1P02458 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
COL2A1P02458 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
COL2A1P02458 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
COL2A1P02458 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
COL2A1P02458 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
COL2A1P02458 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.24□□□□□ -1.41
COL2A1P02458 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
COL2A1P02458 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
COL2A1P02458 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
COL2A1P02458 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
COL2A1P02458 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
COL2A1P02458 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
COL2A1P02458 INTS6P1-201ENST00000504674 2530 ntBASIC6.23□□□□□ -1.41
COL2A1P02458 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
COL2A1P02458 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
COL2A1P02458 U3.28-201ENST00000391249 210 ntBASIC6.23□□□□□ -1.41
COL2A1P02458 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
COL2A1P02458 AC093162.1-201ENST00000419682 124 ntBASIC6.23□□□□□ -1.41
COL2A1P02458 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC6.23□□□□□ -1.41
COL2A1P02458 AC092647.3-201ENST00000443044 633 ntBASIC6.23□□□□□ -1.41
COL2A1P02458 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC6.23□□□□□ -1.41
COL2A1P02458 TRY2P-201ENST00000448860 689 ntBASIC6.23□□□□□ -1.41
COL2A1P02458 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC6.23□□□□□ -1.41
COL2A1P02458 PSAT1P4-201ENST00000466500 526 ntBASIC6.23□□□□□ -1.41
COL2A1P02458 RPL5P22-201ENST00000480199 884 ntBASIC6.23□□□□□ -1.41
COL2A1P02458 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC6.23□□□□□ -1.41
COL2A1P02458 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC6.23□□□□□ -1.41
COL2A1P02458 AC009027.1-201ENST00000604510 479 ntBASIC6.23□□□□□ -1.41
COL2A1P02458 AP005432.2-201ENST00000608162 586 ntBASIC6.23□□□□□ -1.41
COL2A1P02458 AC093799.2-201ENST00000610062 578 ntBASIC6.23□□□□□ -1.41
COL2A1P02458 AC087385.3-201ENST00000620477 187 ntBASIC6.23□□□□□ -1.41
COL2A1P02458 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
COL2A1P02458 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
COL2A1P02458 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.23□□□□□ -1.41
COL2A1P02458 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC6.23□□□□□ -1.41
COL2A1P02458 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC6.23□□□□□ -1.41
COL2A1P02458 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
COL2A1P02458 AL353796.1-201ENST00000561542 3241 ntBASIC6.23□□□□□ -1.41
COL2A1P02458 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
COL2A1P02458 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
COL2A1P02458 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
COL2A1P02458 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
COL2A1P02458 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC6.23□□□□□ -1.41
COL2A1P02458 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
COL2A1P02458 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC6.23□□□□□ -1.41
COL2A1P02458 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
COL2A1P02458 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
COL2A1P02458 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms