Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
TRAV27A0A087WT01 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TRAV27A0A087WT01 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
TRAV27A0A087WT01 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC4.79□□□□□ -1.64
TRAV27A0A087WT01 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
TRAV27A0A087WT01 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC4.79□□□□□ -1.64
TRAV27A0A087WT01 MIR133B-201ENST00000362210 119 ntBASIC4.79□□□□□ -1.64
TRAV27A0A087WT01 RN7SKP186-201ENST00000365371 303 ntBASIC4.79□□□□□ -1.64
TRAV27A0A087WT01 RN7SKP81-201ENST00000365603 331 ntBASIC4.79□□□□□ -1.64
TRAV27A0A087WT01 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC4.79□□□□□ -1.64
TRAV27A0A087WT01 HSPA8P15-201ENST00000401676 786 ntBASIC4.79□□□□□ -1.64
TRAV27A0A087WT01 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
TRAV27A0A087WT01 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC4.79□□□□□ -1.64
TRAV27A0A087WT01 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TRAV27A0A087WT01 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC4.79□□□□□ -1.64
TRAV27A0A087WT01 AL390119.1-201ENST00000440329 312 ntBASIC4.79□□□□□ -1.64
TRAV27A0A087WT01 AC073109.1-201ENST00000445066 978 ntBASIC4.79□□□□□ -1.64
TRAV27A0A087WT01 GAPDHP25-201ENST00000447061 1001 ntBASIC4.79□□□□□ -1.64
TRAV27A0A087WT01 AC104634.1-201ENST00000452720 462 ntBASIC4.79□□□□□ -1.64
TRAV27A0A087WT01 AC084754.1-201ENST00000463466 464 ntBASIC4.79□□□□□ -1.64
TRAV27A0A087WT01 RN7SL423P-201ENST00000486202 304 ntBASIC4.79□□□□□ -1.64
TRAV27A0A087WT01 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC4.79□□□□□ -1.64
TRAV27A0A087WT01 AC022826.1-201ENST00000519383 805 ntBASIC4.79□□□□□ -1.64
TRAV27A0A087WT01 AC100784.1-201ENST00000522790 310 ntBASIC4.79□□□□□ -1.64
TRAV27A0A087WT01 HMGN2P47-201ENST00000559378 272 ntBASIC4.79□□□□□ -1.64
TRAV27A0A087WT01 AC022884.2-201ENST00000578535 580 ntBASIC4.79□□□□□ -1.64
TRAV27A0A087WT01 RBM22P1-201ENST00000578589 1214 ntBASIC4.79□□□□□ -1.64
TRAV27A0A087WT01 AC060766.1-201ENST00000590824 627 ntBASIC4.79□□□□□ -1.64
TRAV27A0A087WT01 AC011626.1-201ENST00000604710 562 ntBASIC4.79□□□□□ -1.64
TRAV27A0A087WT01 AC000068.2-201ENST00000608816 460 ntBASIC4.79□□□□□ -1.64
TRAV27A0A087WT01 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TRAV27A0A087WT01 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TRAV27A0A087WT01 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
TRAV27A0A087WT01 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TRAV27A0A087WT01 AC139426.3-201ENST00000605648 2059 ntBASIC4.79□□□□□ -1.64
TRAV27A0A087WT01 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TRAV27A0A087WT01 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
TRAV27A0A087WT01 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TRAV27A0A087WT01 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
TRAV27A0A087WT01 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC4.78□□□□□ -1.64
TRAV27A0A087WT01 AC023421.1-201ENST00000590535 1785 ntBASIC4.78□□□□□ -1.64
TRAV27A0A087WT01 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TRAV27A0A087WT01 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.78□□□□□ -1.64
TRAV27A0A087WT01 AC022417.1-201ENST00000624768 1303 ntBASIC4.78□□□□□ -1.64
TRAV27A0A087WT01 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC4.78□□□□□ -1.64
TRAV27A0A087WT01 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TRAV27A0A087WT01 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC4.78□□□□□ -1.64
TRAV27A0A087WT01 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TRAV27A0A087WT01 RNA5SP234-201ENST00000363916 119 ntBASIC4.78□□□□□ -1.64
TRAV27A0A087WT01 MIR589-201ENST00000385238 99 ntBASIC4.78□□□□□ -1.64
TRAV27A0A087WT01 COX5BP7-201ENST00000414780 274 ntBASIC4.78□□□□□ -1.64
TRAV27A0A087WT01 PPP2R2DP1-201ENST00000420526 637 ntBASIC4.78□□□□□ -1.64
TRAV27A0A087WT01 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC4.78□□□□□ -1.64
TRAV27A0A087WT01 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC4.78□□□□□ -1.64
TRAV27A0A087WT01 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC4.78□□□□□ -1.64
TRAV27A0A087WT01 RANP1-206ENST00000455094 651 ntBASIC4.78□□□□□ -1.64
TRAV27A0A087WT01 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.78□□□□□ -1.64
TRAV27A0A087WT01 RN7SL51P-201ENST00000468230 285 ntBASIC4.78□□□□□ -1.64
TRAV27A0A087WT01 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC4.78□□□□□ -1.64
TRAV27A0A087WT01 AC090638.1-201ENST00000498296 909 ntBASIC4.78□□□□□ -1.64
TRAV27A0A087WT01 NIFKP7-201ENST00000503365 834 ntBASIC4.78□□□□□ -1.64
TRAV27A0A087WT01 AC074087.1-201ENST00000512059 724 ntBASIC4.78□□□□□ -1.64
TRAV27A0A087WT01 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC4.78□□□□□ -1.64
TRAV27A0A087WT01 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC4.78□□□□□ -1.64
TRAV27A0A087WT01 YWHABP2-201ENST00000540201 713 ntBASIC4.78□□□□□ -1.64
TRAV27A0A087WT01 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC4.78□□□□□ -1.64
TRAV27A0A087WT01 BLZF2P-201ENST00000553776 1130 ntBASIC4.78□□□□□ -1.64
TRAV27A0A087WT01 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC4.78□□□□□ -1.64
TRAV27A0A087WT01 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.78□□□□□ -1.64
TRAV27A0A087WT01 AC040958.1-201ENST00000561102 201 ntBASIC4.78□□□□□ -1.64
TRAV27A0A087WT01 AC106730.2-201ENST00000566641 540 ntBASIC4.78□□□□□ -1.64
TRAV27A0A087WT01 AC127024.5-201ENST00000580085 462 ntBASIC4.78□□□□□ -1.64
TRAV27A0A087WT01 MIR1273E-201ENST00000581165 102 ntBASIC4.78□□□□□ -1.64
TRAV27A0A087WT01 MRO-208ENST00000588444 866 ntTSL 3 BASIC4.78□□□□□ -1.64
TRAV27A0A087WT01 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.78□□□□□ -1.64
TRAV27A0A087WT01 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC4.78□□□□□ -1.64
TRAV27A0A087WT01 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC4.78□□□□□ -1.64
TRAV27A0A087WT01 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC4.78□□□□□ -1.64
TRAV27A0A087WT01 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC4.78□□□□□ -1.64
TRAV27A0A087WT01 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC4.78□□□□□ -1.64
TRAV27A0A087WT01 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
TRAV27A0A087WT01 AP000550.3-201ENST00000637734 379 ntBASIC4.78□□□□□ -1.64
TRAV27A0A087WT01 AC119674.1-217ENST00000641942 1086 ntBASIC4.78□□□□□ -1.64
TRAV27A0A087WT01 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TRAV27A0A087WT01 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TRAV27A0A087WT01 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TRAV27A0A087WT01 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TRAV27A0A087WT01 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC4.78□□□□□ -1.64
TRAV27A0A087WT01 PHACTR2P1-201ENST00000605639 1414 ntBASIC4.78□□□□□ -1.64
TRAV27A0A087WT01 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
TRAV27A0A087WT01 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TRAV27A0A087WT01 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.78□□□□□ -1.64
TRAV27A0A087WT01 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.78□□□□□ -1.64
TRAV27A0A087WT01 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
TRAV27A0A087WT01 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.78□□□□□ -1.64
TRAV27A0A087WT01 RNF19BPY-201ENST00000458209 1550 ntBASIC4.78□□□□□ -1.64
TRAV27A0A087WT01 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC4.78□□□□□ -1.64
TRAV27A0A087WT01 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
TRAV27A0A087WT01 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TRAV27A0A087WT01 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms