Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SIX2Q9NPC8 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SIX2Q9NPC8 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.74□□□□□ -1.49
SIX2Q9NPC8 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
SIX2Q9NPC8 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SIX2Q9NPC8 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SIX2Q9NPC8 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
SIX2Q9NPC8 AC004656.1-201ENST00000568479 4951 ntBASIC5.73□□□□□ -1.49
SIX2Q9NPC8 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SIX2Q9NPC8 RN7SKP15-201ENST00000364742 309 ntBASIC5.73□□□□□ -1.49
SIX2Q9NPC8 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SIX2Q9NPC8 NPM1P10-201ENST00000398310 865 ntBASIC5.73□□□□□ -1.49
SIX2Q9NPC8 RN7SKP286-201ENST00000410894 299 ntBASIC5.73□□□□□ -1.49
SIX2Q9NPC8 COX5BP7-201ENST00000414780 274 ntBASIC5.73□□□□□ -1.49
SIX2Q9NPC8 AC244453.4-201ENST00000419150 388 ntBASIC5.73□□□□□ -1.49
SIX2Q9NPC8 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.73□□□□□ -1.49
SIX2Q9NPC8 AC244033.1-201ENST00000426826 870 ntBASIC5.73□□□□□ -1.49
SIX2Q9NPC8 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.73□□□□□ -1.49
SIX2Q9NPC8 GAPDHP14-201ENST00000450472 937 ntBASIC5.73□□□□□ -1.49
SIX2Q9NPC8 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC5.73□□□□□ -1.49
SIX2Q9NPC8 PPIAP19-201ENST00000486414 492 ntBASIC5.73□□□□□ -1.49
SIX2Q9NPC8 EIF1P7-201ENST00000487533 337 ntBASIC5.73□□□□□ -1.49
SIX2Q9NPC8 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.73□□□□□ -1.49
SIX2Q9NPC8 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.73□□□□□ -1.49
SIX2Q9NPC8 AC005341.1-201ENST00000571086 708 ntBASIC5.73□□□□□ -1.49
SIX2Q9NPC8 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.73□□□□□ -1.49
SIX2Q9NPC8 PRPF19P1-201ENST00000584766 898 ntBASIC5.73□□□□□ -1.49
SIX2Q9NPC8 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
SIX2Q9NPC8 AC100814.1-201ENST00000606963 623 ntBASIC5.73□□□□□ -1.49
SIX2Q9NPC8 AL022394.1-201ENST00000606979 292 ntBASIC5.73□□□□□ -1.49
SIX2Q9NPC8 AL359513.1-201ENST00000614364 557 ntBASIC5.73□□□□□ -1.49
SIX2Q9NPC8 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.73□□□□□ -1.49
SIX2Q9NPC8 AC091932.2-201ENST00000623014 291 ntBASIC5.73□□□□□ -1.49
SIX2Q9NPC8 AC103703.1-201ENST00000634783 663 ntBASIC5.73□□□□□ -1.49
SIX2Q9NPC8 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
SIX2Q9NPC8 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
SIX2Q9NPC8 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.73□□□□□ -1.49
SIX2Q9NPC8 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SIX2Q9NPC8 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
SIX2Q9NPC8 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
SIX2Q9NPC8 GDA-209ENST00000545168 5362 ntTSL 2 BASIC5.73□□□□□ -1.49
SIX2Q9NPC8 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SIX2Q9NPC8 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.73□□□□□ -1.49
SIX2Q9NPC8 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.72□□□□□ -1.49
SIX2Q9NPC8 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SIX2Q9NPC8 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC5.72□□□□□ -1.49
SIX2Q9NPC8 ADAM5-202ENST00000399789 1942 ntBASIC5.72□□□□□ -1.49
SIX2Q9NPC8 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SIX2Q9NPC8 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
SIX2Q9NPC8 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SIX2Q9NPC8 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.72□□□□□ -1.49
SIX2Q9NPC8 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.72□□□□□ -1.49
SIX2Q9NPC8 RNA5SP319-201ENST00000362768 119 ntBASIC5.72□□□□□ -1.49
SIX2Q9NPC8 RNU1-19P-201ENST00000363306 165 ntBASIC5.72□□□□□ -1.49
SIX2Q9NPC8 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SIX2Q9NPC8 MIR589-201ENST00000385238 99 ntBASIC5.72□□□□□ -1.49
SIX2Q9NPC8 RAB5CP1-201ENST00000395972 580 ntBASIC5.72□□□□□ -1.49
SIX2Q9NPC8 VTI1BP4-201ENST00000427516 527 ntBASIC5.72□□□□□ -1.49
SIX2Q9NPC8 DSTNP5-201ENST00000427921 523 ntBASIC5.72□□□□□ -1.49
SIX2Q9NPC8 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.72□□□□□ -1.49
SIX2Q9NPC8 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.72□□□□□ -1.49
SIX2Q9NPC8 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.72□□□□□ -1.49
SIX2Q9NPC8 YWHAEP1-201ENST00000453697 763 ntBASIC5.72□□□□□ -1.49
SIX2Q9NPC8 AC115223.1-201ENST00000466377 870 ntBASIC5.72□□□□□ -1.49
SIX2Q9NPC8 RPEP1-201ENST00000504507 658 ntBASIC5.72□□□□□ -1.49
SIX2Q9NPC8 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.72□□□□□ -1.49
SIX2Q9NPC8 RNA5SP230-201ENST00000517039 122 ntBASIC5.72□□□□□ -1.49
SIX2Q9NPC8 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC5.72□□□□□ -1.49
SIX2Q9NPC8 TMEM97P2-201ENST00000517841 403 ntBASIC5.72□□□□□ -1.49
SIX2Q9NPC8 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
SIX2Q9NPC8 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.72□□□□□ -1.49
SIX2Q9NPC8 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SIX2Q9NPC8 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.72□□□□□ -1.49
SIX2Q9NPC8 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.72□□□□□ -1.49
SIX2Q9NPC8 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.72□□□□□ -1.49
SIX2Q9NPC8 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.72□□□□□ -1.49
SIX2Q9NPC8 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.72□□□□□ -1.49
SIX2Q9NPC8 AC008814.1-201ENST00000603797 406 ntBASIC5.72□□□□□ -1.49
SIX2Q9NPC8 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC5.72□□□□□ -1.49
SIX2Q9NPC8 AC126175.1-201ENST00000617041 758 ntBASIC5.72□□□□□ -1.49
SIX2Q9NPC8 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC5.72□□□□□ -1.49
SIX2Q9NPC8 FRG1EP-201ENST00000634469 770 ntBASIC5.72□□□□□ -1.49
SIX2Q9NPC8 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SIX2Q9NPC8 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
SIX2Q9NPC8 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
SIX2Q9NPC8 AP000473.2-201ENST00000602659 1537 ntBASIC5.72□□□□□ -1.49
SIX2Q9NPC8 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
SIX2Q9NPC8 AC097634.1-201ENST00000604491 2467 ntBASIC5.72□□□□□ -1.49
SIX2Q9NPC8 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SIX2Q9NPC8 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SIX2Q9NPC8 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SIX2Q9NPC8 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SIX2Q9NPC8 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.72□□□□□ -1.49
SIX2Q9NPC8 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.71□□□□□ -1.49
SIX2Q9NPC8 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.49
SIX2Q9NPC8 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.71□□□□□ -1.49
SIX2Q9NPC8 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.71□□□□□ -1.49
SIX2Q9NPC8 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
SIX2Q9NPC8 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
SIX2Q9NPC8 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms