Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC6.94□□□□□ -1.3
ABCA3Q99758 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
ABCA3Q99758 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC6.94□□□□□ -1.3
ABCA3Q99758 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
ABCA3Q99758 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
ABCA3Q99758 TAF1-203ENST00000373790 7629 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
ABCA3Q99758 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
ABCA3Q99758 RNA5SP191-201ENST00000362585 102 ntBASIC6.94□□□□□ -1.3
ABCA3Q99758 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
ABCA3Q99758 RNU1-74P-201ENST00000384108 171 ntBASIC6.94□□□□□ -1.3
ABCA3Q99758 U3.28-201ENST00000391249 210 ntBASIC6.94□□□□□ -1.3
ABCA3Q99758 CYP4F29P-201ENST00000420685 446 ntBASIC6.94□□□□□ -1.3
ABCA3Q99758 AC068287.1-201ENST00000430283 295 ntBASIC6.94□□□□□ -1.3
ABCA3Q99758 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC6.94□□□□□ -1.3
ABCA3Q99758 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC6.94□□□□□ -1.3
ABCA3Q99758 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC6.94□□□□□ -1.3
ABCA3Q99758 RPL12P20-201ENST00000475538 479 ntBASIC6.94□□□□□ -1.3
ABCA3Q99758 AC097173.1-201ENST00000505862 819 ntBASIC6.94□□□□□ -1.3
ABCA3Q99758 snoU109.5-201ENST00000516231 132 ntBASIC6.94□□□□□ -1.3
ABCA3Q99758 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC6.94□□□□□ -1.3
ABCA3Q99758 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC6.94□□□□□ -1.3
ABCA3Q99758 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
ABCA3Q99758 AC233699.1-201ENST00000569955 1168 ntBASIC6.94□□□□□ -1.3
ABCA3Q99758 AC105254.2-201ENST00000603636 436 ntBASIC6.94□□□□□ -1.3
ABCA3Q99758 AC108738.1-201ENST00000603703 237 ntBASIC6.94□□□□□ -1.3
ABCA3Q99758 AC091932.2-201ENST00000623014 291 ntBASIC6.94□□□□□ -1.3
ABCA3Q99758 AC099654.6-201ENST00000636487 512 ntBASIC6.94□□□□□ -1.3
ABCA3Q99758 SPRYD4-201ENST00000338146 10779 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
ABCA3Q99758 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
ABCA3Q99758 MAK-202ENST00000354489 3941 ntTSL 5 BASIC6.94□□□□□ -1.3
ABCA3Q99758 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC6.94□□□□□ -1.3
ABCA3Q99758 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
ABCA3Q99758 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
ABCA3Q99758 CLTC-201ENST00000269122 7760 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
ABCA3Q99758 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
ABCA3Q99758 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
ABCA3Q99758 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
ABCA3Q99758 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC6.94□□□□□ -1.3
ABCA3Q99758 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC6.94□□□□□ -1.3
ABCA3Q99758 AL590240.1-201ENST00000334118 313 ntBASIC6.93□□□□□ -1.3
ABCA3Q99758 AL137845.2-201ENST00000444292 988 ntBASIC6.93□□□□□ -1.3
ABCA3Q99758 LINC02210-201ENST00000444561 288 ntBASIC6.93□□□□□ -1.3
ABCA3Q99758 AC013356.1-201ENST00000489027 564 ntBASIC6.93□□□□□ -1.3
ABCA3Q99758 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC6.93□□□□□ -1.3
ABCA3Q99758 MORF4L1P3-201ENST00000525966 950 ntBASIC6.93□□□□□ -1.3
ABCA3Q99758 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC6.93□□□□□ -1.3
ABCA3Q99758 AC009027.1-201ENST00000604510 479 ntBASIC6.93□□□□□ -1.3
ABCA3Q99758 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC6.93□□□□□ -1.3
ABCA3Q99758 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC6.93□□□□□ -1.3
ABCA3Q99758 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
ABCA3Q99758 AL359757.1-201ENST00000623176 255 ntBASIC6.93□□□□□ -1.3
ABCA3Q99758 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
ABCA3Q99758 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
ABCA3Q99758 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
ABCA3Q99758 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC6.93□□□□□ -1.3
ABCA3Q99758 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
ABCA3Q99758 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC6.93□□□□□ -1.3
ABCA3Q99758 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC6.93□□□□□ -1.3
ABCA3Q99758 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
ABCA3Q99758 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
ABCA3Q99758 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.93□□□□□ -1.3
ABCA3Q99758 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
ABCA3Q99758 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC6.93□□□□□ -1.3
ABCA3Q99758 SNORA77-201ENST00000408716 125 ntBASIC6.93□□□□□ -1.3
ABCA3Q99758 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC6.93□□□□□ -1.3
ABCA3Q99758 AC091912.1-201ENST00000511351 248 ntBASIC6.93□□□□□ -1.3
ABCA3Q99758 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.93□□□□□ -1.3
ABCA3Q99758 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC6.93□□□□□ -1.3
ABCA3Q99758 AP003400.3-201ENST00000624904 346 ntBASIC6.93□□□□□ -1.3
ABCA3Q99758 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
ABCA3Q99758 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.92□□□□□ -1.3
ABCA3Q99758 AL031123.3-201ENST00000623345 1837 ntBASIC6.92□□□□□ -1.3
ABCA3Q99758 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
ABCA3Q99758 MAP3K13-201ENST00000265026 9876 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
ABCA3Q99758 TRPM8-201ENST00000324695 5621 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
ABCA3Q99758 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
ABCA3Q99758 GON4L-203ENST00000368331 7823 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
ABCA3Q99758 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
ABCA3Q99758 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
ABCA3Q99758 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
ABCA3Q99758 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
ABCA3Q99758 SPA17-204ENST00000532692 4949 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
ABCA3Q99758 SPATA31C1-201ENST00000420021 3895 ntBASIC6.92□□□□□ -1.3
ABCA3Q99758 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
ABCA3Q99758 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
ABCA3Q99758 HSPA8P15-201ENST00000401676 786 ntBASIC6.92□□□□□ -1.3
ABCA3Q99758 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC6.92□□□□□ -1.3
ABCA3Q99758 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.92□□□□□ -1.3
ABCA3Q99758 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.92□□□□□ -1.3
ABCA3Q99758 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC6.92□□□□□ -1.3
ABCA3Q99758 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
ABCA3Q99758 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC6.92□□□□□ -1.3
ABCA3Q99758 OR52J1P-201ENST00000450596 932 ntBASIC6.92□□□□□ -1.3
ABCA3Q99758 OR52A4P-201ENST00000472867 958 ntBASIC6.92□□□□□ -1.3
ABCA3Q99758 AC010350.1-201ENST00000504908 231 ntBASIC6.92□□□□□ -1.3
ABCA3Q99758 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC6.92□□□□□ -1.3
ABCA3Q99758 SNORA70.11-201ENST00000515987 138 ntBASIC6.92□□□□□ -1.3
ABCA3Q99758 SNORA70.13-201ENST00000516116 138 ntBASIC6.92□□□□□ -1.3
ABCA3Q99758 RNA5SP392-201ENST00000516905 112 ntBASIC6.92□□□□□ -1.3
ABCA3Q99758 ARL6IP1P3-201ENST00000524544 560 ntBASIC6.92□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms