Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PTP4A1Q93096 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
PTP4A1Q93096 GCNT1P4-201ENST00000404096 329 ntBASIC5.24□□□□□ -1.57
PTP4A1Q93096 RNA5SP431-201ENST00000410312 120 ntBASIC5.24□□□□□ -1.57
PTP4A1Q93096 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.24□□□□□ -1.57
PTP4A1Q93096 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC5.24□□□□□ -1.57
PTP4A1Q93096 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.24□□□□□ -1.57
PTP4A1Q93096 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.24□□□□□ -1.57
PTP4A1Q93096 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.24□□□□□ -1.57
PTP4A1Q93096 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PTP4A1Q93096 AC099670.2-201ENST00000435130 321 ntBASIC5.24□□□□□ -1.57
PTP4A1Q93096 AC023141.3-201ENST00000436698 278 ntBASIC5.24□□□□□ -1.57
PTP4A1Q93096 MTND2P40-201ENST00000436718 841 ntBASIC5.24□□□□□ -1.57
PTP4A1Q93096 AC245517.2-201ENST00000442890 346 ntBASIC5.24□□□□□ -1.57
PTP4A1Q93096 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.24□□□□□ -1.57
PTP4A1Q93096 RPL7L1P1-201ENST00000448259 785 ntBASIC5.24□□□□□ -1.57
PTP4A1Q93096 PPIAP7-201ENST00000454070 489 ntBASIC5.24□□□□□ -1.57
PTP4A1Q93096 AC004129.2-201ENST00000457229 287 ntBASIC5.24□□□□□ -1.57
PTP4A1Q93096 RN7SL269P-201ENST00000467795 305 ntBASIC5.24□□□□□ -1.57
PTP4A1Q93096 EIF3LP3-201ENST00000495197 822 ntBASIC5.24□□□□□ -1.57
PTP4A1Q93096 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.24□□□□□ -1.57
PTP4A1Q93096 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.24□□□□□ -1.57
PTP4A1Q93096 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC5.24□□□□□ -1.57
PTP4A1Q93096 AC111000.6-201ENST00000514471 709 ntBASIC5.24□□□□□ -1.57
PTP4A1Q93096 RNU6-513P-201ENST00000516104 104 ntBASIC5.24□□□□□ -1.57
PTP4A1Q93096 RNA5SP230-201ENST00000517039 122 ntBASIC5.24□□□□□ -1.57
PTP4A1Q93096 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC5.24□□□□□ -1.57
PTP4A1Q93096 OR8Q1P-201ENST00000526467 655 ntBASIC5.24□□□□□ -1.57
PTP4A1Q93096 AP000620.1-201ENST00000527147 504 ntBASIC5.24□□□□□ -1.57
PTP4A1Q93096 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PTP4A1Q93096 OR4A43P-201ENST00000532938 908 ntBASIC5.24□□□□□ -1.57
PTP4A1Q93096 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC5.24□□□□□ -1.57
PTP4A1Q93096 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC5.24□□□□□ -1.57
PTP4A1Q93096 LSM3P2-201ENST00000551246 273 ntBASIC5.24□□□□□ -1.57
PTP4A1Q93096 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC5.24□□□□□ -1.57
PTP4A1Q93096 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.24□□□□□ -1.57
PTP4A1Q93096 AL845552.1-201ENST00000556820 323 ntBASIC5.24□□□□□ -1.57
PTP4A1Q93096 AC092332.1-201ENST00000563684 829 ntBASIC5.24□□□□□ -1.57
PTP4A1Q93096 OR1E3-201ENST00000575608 948 ntBASIC5.24□□□□□ -1.57
PTP4A1Q93096 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC5.24□□□□□ -1.57
PTP4A1Q93096 MIR4502-201ENST00000580432 81 ntBASIC5.24□□□□□ -1.57
PTP4A1Q93096 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.24□□□□□ -1.57
PTP4A1Q93096 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.24□□□□□ -1.57
PTP4A1Q93096 AC145423.1-201ENST00000605712 336 ntBASIC5.24□□□□□ -1.57
PTP4A1Q93096 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.24□□□□□ -1.57
PTP4A1Q93096 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PTP4A1Q93096 AL512652.1-201ENST00000619006 500 ntBASIC5.24□□□□□ -1.57
PTP4A1Q93096 MIR6806-201ENST00000622141 64 ntBASIC5.24□□□□□ -1.57
PTP4A1Q93096 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.24□□□□□ -1.57
PTP4A1Q93096 LINC00216-201ENST00000623548 1126 ntBASIC5.24□□□□□ -1.57
PTP4A1Q93096 AC104820.1-201ENST00000624183 307 ntBASIC5.24□□□□□ -1.57
PTP4A1Q93096 AC073488.3-201ENST00000631611 778 ntBASIC5.24□□□□□ -1.57
PTP4A1Q93096 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.24□□□□□ -1.57
PTP4A1Q93096 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC5.24□□□□□ -1.57
PTP4A1Q93096 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PTP4A1Q93096 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
PTP4A1Q93096 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.24□□□□□ -1.57
PTP4A1Q93096 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.24□□□□□ -1.57
PTP4A1Q93096 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PTP4A1Q93096 AC239868.2-201ENST00000564237 4527 ntBASIC5.24□□□□□ -1.57
PTP4A1Q93096 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
PTP4A1Q93096 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PTP4A1Q93096 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
PTP4A1Q93096 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.23□□□□□ -1.57
PTP4A1Q93096 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.23□□□□□ -1.57
PTP4A1Q93096 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.23□□□□□ -1.57
PTP4A1Q93096 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.23□□□□□ -1.57
PTP4A1Q93096 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PTP4A1Q93096 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PTP4A1Q93096 AC007996.1-201ENST00000620414 2821 ntBASIC5.23□□□□□ -1.57
PTP4A1Q93096 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.23□□□□□ -1.57
PTP4A1Q93096 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
PTP4A1Q93096 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PTP4A1Q93096 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PTP4A1Q93096 RNA5SP232-201ENST00000364144 119 ntBASIC5.23□□□□□ -1.57
PTP4A1Q93096 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
PTP4A1Q93096 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PTP4A1Q93096 RNA5SP498-201ENST00000411342 120 ntBASIC5.23□□□□□ -1.57
PTP4A1Q93096 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC5.23□□□□□ -1.57
PTP4A1Q93096 TRGV6-201ENST00000417928 299 ntBASIC5.23□□□□□ -1.57
PTP4A1Q93096 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.23□□□□□ -1.57
PTP4A1Q93096 HSPE1P16-201ENST00000426640 348 ntBASIC5.23□□□□□ -1.57
PTP4A1Q93096 AC138761.5-201ENST00000433967 325 ntBASIC5.23□□□□□ -1.57
PTP4A1Q93096 AC114878.1-201ENST00000441166 358 ntBASIC5.23□□□□□ -1.57
PTP4A1Q93096 RPL6P30-201ENST00000443382 862 ntBASIC5.23□□□□□ -1.57
PTP4A1Q93096 AC023512.1-201ENST00000444513 499 ntBASIC5.23□□□□□ -1.57
PTP4A1Q93096 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PTP4A1Q93096 AC023245.1-201ENST00000468501 517 ntBASIC5.23□□□□□ -1.57
PTP4A1Q93096 OR7E99P-201ENST00000505750 922 ntBASIC5.23□□□□□ -1.57
PTP4A1Q93096 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.23□□□□□ -1.57
PTP4A1Q93096 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.23□□□□□ -1.57
PTP4A1Q93096 HSD3BP3-201ENST00000514706 994 ntBASIC5.23□□□□□ -1.57
PTP4A1Q93096 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.23□□□□□ -1.57
PTP4A1Q93096 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.23□□□□□ -1.57
PTP4A1Q93096 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.23□□□□□ -1.57
PTP4A1Q93096 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.23□□□□□ -1.57
PTP4A1Q93096 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC5.23□□□□□ -1.57
PTP4A1Q93096 AC084121.1-201ENST00000533882 835 ntBASIC5.23□□□□□ -1.57
PTP4A1Q93096 AC125612.1-201ENST00000547580 377 ntBASIC5.23□□□□□ -1.57
PTP4A1Q93096 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms