Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
RTN4IP1Q8WWV3 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC4.57□□□□□ -1.68
RTN4IP1Q8WWV3 RPL12P18-201ENST00000437175 325 ntBASIC4.57□□□□□ -1.68
RTN4IP1Q8WWV3 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC4.57□□□□□ -1.68
RTN4IP1Q8WWV3 AC090804.1-201ENST00000448870 490 ntBASIC4.57□□□□□ -1.68
RTN4IP1Q8WWV3 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC4.57□□□□□ -1.68
RTN4IP1Q8WWV3 OARD1-211ENST00000480585 829 ntTSL 3 BASIC4.57□□□□□ -1.68
RTN4IP1Q8WWV3 IGBP1P4-201ENST00000503202 879 ntBASIC4.57□□□□□ -1.68
RTN4IP1Q8WWV3 HMGN1P9-201ENST00000515212 298 ntBASIC4.57□□□□□ -1.68
RTN4IP1Q8WWV3 IGHVII-60-1-201ENST00000519079 256 ntBASIC4.57□□□□□ -1.68
RTN4IP1Q8WWV3 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC4.57□□□□□ -1.68
RTN4IP1Q8WWV3 MRPS16P1-201ENST00000523462 412 ntBASIC4.57□□□□□ -1.68
RTN4IP1Q8WWV3 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC4.57□□□□□ -1.68
RTN4IP1Q8WWV3 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC4.57□□□□□ -1.68
RTN4IP1Q8WWV3 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC4.57□□□□□ -1.68
RTN4IP1Q8WWV3 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC4.57□□□□□ -1.68
RTN4IP1Q8WWV3 NDUFA5P11-201ENST00000567995 343 ntBASIC4.57□□□□□ -1.68
RTN4IP1Q8WWV3 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC4.57□□□□□ -1.68
RTN4IP1Q8WWV3 MTCYBP13-201ENST00000578634 1093 ntBASIC4.57□□□□□ -1.68
RTN4IP1Q8WWV3 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC4.57□□□□□ -1.68
RTN4IP1Q8WWV3 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC4.57□□□□□ -1.68
RTN4IP1Q8WWV3 AC006363.1-201ENST00000603806 463 ntBASIC4.57□□□□□ -1.68
RTN4IP1Q8WWV3 MIR6778-201ENST00000617912 73 ntBASIC4.57□□□□□ -1.68
RTN4IP1Q8WWV3 AP005431.1-201ENST00000618479 319 ntBASIC4.57□□□□□ -1.68
RTN4IP1Q8WWV3 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
RTN4IP1Q8WWV3 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
RTN4IP1Q8WWV3 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
RTN4IP1Q8WWV3 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
RTN4IP1Q8WWV3 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
RTN4IP1Q8WWV3 AC003973.3-201ENST00000624863 2822 ntBASIC4.57□□□□□ -1.68
RTN4IP1Q8WWV3 AC003985.2-201ENST00000562268 1669 ntBASIC4.57□□□□□ -1.68
RTN4IP1Q8WWV3 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
RTN4IP1Q8WWV3 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
RTN4IP1Q8WWV3 AC012078.1-201ENST00000405035 1646 ntBASIC4.57□□□□□ -1.68
RTN4IP1Q8WWV3 MRE11P1-201ENST00000464884 2127 ntBASIC4.57□□□□□ -1.68
RTN4IP1Q8WWV3 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
RTN4IP1Q8WWV3 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
RTN4IP1Q8WWV3 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
RTN4IP1Q8WWV3 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RTN4IP1Q8WWV3 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
RTN4IP1Q8WWV3 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
RTN4IP1Q8WWV3 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC4.56□□□□□ -1.68
RTN4IP1Q8WWV3 SMG1P4-204ENST00000523028 4131 ntBASIC4.56□□□□□ -1.68
RTN4IP1Q8WWV3 HSPA8P14-201ENST00000552265 1805 ntBASIC4.56□□□□□ -1.68
RTN4IP1Q8WWV3 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
RTN4IP1Q8WWV3 AC022417.1-201ENST00000624768 1303 ntBASIC4.56□□□□□ -1.68
RTN4IP1Q8WWV3 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
RTN4IP1Q8WWV3 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
RTN4IP1Q8WWV3 AL603750.1-201ENST00000624216 1717 ntBASIC4.56□□□□□ -1.68
RTN4IP1Q8WWV3 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
RTN4IP1Q8WWV3 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RTN4IP1Q8WWV3 RNA5SP394-201ENST00000364216 119 ntBASIC4.56□□□□□ -1.68
RTN4IP1Q8WWV3 AC007618.1-201ENST00000366455 732 ntBASIC4.56□□□□□ -1.68
RTN4IP1Q8WWV3 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
RTN4IP1Q8WWV3 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
RTN4IP1Q8WWV3 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC4.56□□□□□ -1.68
RTN4IP1Q8WWV3 RPS3P2-201ENST00000421346 701 ntBASIC4.56□□□□□ -1.68
RTN4IP1Q8WWV3 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
RTN4IP1Q8WWV3 AC113412.1-201ENST00000425840 504 ntBASIC4.56□□□□□ -1.68
RTN4IP1Q8WWV3 AC017019.1-201ENST00000426129 261 ntBASIC4.56□□□□□ -1.68
RTN4IP1Q8WWV3 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.56□□□□□ -1.68
RTN4IP1Q8WWV3 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC4.56□□□□□ -1.68
RTN4IP1Q8WWV3 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC4.56□□□□□ -1.68
RTN4IP1Q8WWV3 OR52E7P-201ENST00000452394 933 ntBASIC4.56□□□□□ -1.68
RTN4IP1Q8WWV3 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC4.56□□□□□ -1.68
RTN4IP1Q8WWV3 RPS26P24-201ENST00000497656 331 ntBASIC4.56□□□□□ -1.68
RTN4IP1Q8WWV3 MYL12BP2-201ENST00000503948 512 ntBASIC4.56□□□□□ -1.68
RTN4IP1Q8WWV3 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.56□□□□□ -1.68
RTN4IP1Q8WWV3 RNU6-615P-201ENST00000516065 106 ntBASIC4.56□□□□□ -1.68
RTN4IP1Q8WWV3 IGKV2-4-201ENST00000523070 340 ntBASIC4.56□□□□□ -1.68
RTN4IP1Q8WWV3 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC4.56□□□□□ -1.68
RTN4IP1Q8WWV3 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC4.56□□□□□ -1.68
RTN4IP1Q8WWV3 PRPF19P1-201ENST00000584766 898 ntBASIC4.56□□□□□ -1.68
RTN4IP1Q8WWV3 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
RTN4IP1Q8WWV3 AC100767.2-201ENST00000604840 693 ntBASIC4.56□□□□□ -1.68
RTN4IP1Q8WWV3 Z95327.3-201ENST00000610385 572 ntBASIC4.56□□□□□ -1.68
RTN4IP1Q8WWV3 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC4.56□□□□□ -1.68
RTN4IP1Q8WWV3 AL359742.1-201ENST00000622497 540 ntBASIC4.56□□□□□ -1.68
RTN4IP1Q8WWV3 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC4.56□□□□□ -1.68
RTN4IP1Q8WWV3 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC4.56□□□□□ -1.68
RTN4IP1Q8WWV3 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.56□□□□□ -1.68
RTN4IP1Q8WWV3 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
RTN4IP1Q8WWV3 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC4.56□□□□□ -1.68
RTN4IP1Q8WWV3 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
RTN4IP1Q8WWV3 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
RTN4IP1Q8WWV3 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RTN4IP1Q8WWV3 AL162456.1-201ENST00000634535 2006 ntBASIC4.56□□□□□ -1.68
RTN4IP1Q8WWV3 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
RTN4IP1Q8WWV3 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC4.56□□□□□ -1.68
RTN4IP1Q8WWV3 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
RTN4IP1Q8WWV3 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
RTN4IP1Q8WWV3 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
RTN4IP1Q8WWV3 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
RTN4IP1Q8WWV3 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
RTN4IP1Q8WWV3 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
RTN4IP1Q8WWV3 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC4.55□□□□□ -1.68
RTN4IP1Q8WWV3 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
RTN4IP1Q8WWV3 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.55□□□□□ -1.68
RTN4IP1Q8WWV3 NR1H5P-201ENST00000452683 1377 ntBASIC4.55□□□□□ -1.68
RTN4IP1Q8WWV3 TRIM51GP-201ENST00000534741 1350 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms