Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 AC005224.3-201ENST00000584683 2140 ntBASIC5.7□□□□□ -1.5
NR1H2P55055 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC5.7□□□□□ -1.5
NR1H2P55055 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC5.7□□□□□ -1.5
NR1H2P55055 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC5.7□□□□□ -1.5
NR1H2P55055 SNORA74.4-201ENST00000607595 199 ntBASIC5.7□□□□□ -1.5
NR1H2P55055 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.7□□□□□ -1.5
NR1H2P55055 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.7□□□□□ -1.5
NR1H2P55055 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC5.7□□□□□ -1.5
NR1H2P55055 AC011472.4-201ENST00000615848 491 ntBASIC5.7□□□□□ -1.5
NR1H2P55055 MIR6729-201ENST00000618194 65 ntBASIC5.7□□□□□ -1.5
NR1H2P55055 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.7□□□□□ -1.5
NR1H2P55055 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.7□□□□□ -1.5
NR1H2P55055 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.7□□□□□ -1.5
NR1H2P55055 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NR1H2P55055 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NR1H2P55055 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NR1H2P55055 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.7□□□□□ -1.5
NR1H2P55055 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.7□□□□□ -1.5
NR1H2P55055 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.7□□□□□ -1.5
NR1H2P55055 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.7□□□□□ -1.5
NR1H2P55055 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NR1H2P55055 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.7□□□□□ -1.5
NR1H2P55055 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
NR1H2P55055 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NR1H2P55055 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NR1H2P55055 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
NR1H2P55055 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NR1H2P55055 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.69□□□□□ -1.5
NR1H2P55055 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NR1H2P55055 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
NR1H2P55055 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NR1H2P55055 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
NR1H2P55055 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NR1H2P55055 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.69□□□□□ -1.5
NR1H2P55055 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
NR1H2P55055 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NR1H2P55055 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.69□□□□□ -1.5
NR1H2P55055 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NR1H2P55055 RNA5SP433-201ENST00000364491 114 ntBASIC5.69□□□□□ -1.5
NR1H2P55055 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NR1H2P55055 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC5.69□□□□□ -1.5
NR1H2P55055 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NR1H2P55055 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC5.69□□□□□ -1.5
NR1H2P55055 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.69□□□□□ -1.5
NR1H2P55055 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC5.69□□□□□ -1.5
NR1H2P55055 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC5.69□□□□□ -1.5
NR1H2P55055 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC5.69□□□□□ -1.5
NR1H2P55055 AL035551.1-201ENST00000446931 348 ntBASIC5.69□□□□□ -1.5
NR1H2P55055 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.69□□□□□ -1.5
NR1H2P55055 NDUFA5P5-201ENST00000468361 342 ntBASIC5.69□□□□□ -1.5
NR1H2P55055 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC5.69□□□□□ -1.5
NR1H2P55055 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.69□□□□□ -1.5
NR1H2P55055 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC5.69□□□□□ -1.5
NR1H2P55055 AC108103.1-201ENST00000511286 446 ntBASIC5.69□□□□□ -1.5
NR1H2P55055 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC5.69□□□□□ -1.5
NR1H2P55055 RNU6-1102P-201ENST00000516149 96 ntBASIC5.69□□□□□ -1.5
NR1H2P55055 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NR1H2P55055 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC5.69□□□□□ -1.5
NR1H2P55055 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC5.69□□□□□ -1.5
NR1H2P55055 AL359219.2-201ENST00000555184 348 ntBASIC5.69□□□□□ -1.5
NR1H2P55055 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC5.69□□□□□ -1.5
NR1H2P55055 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.69□□□□□ -1.5
NR1H2P55055 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC5.69□□□□□ -1.5
NR1H2P55055 AC002519.2-203ENST00000567043 837 ntBASIC5.69□□□□□ -1.5
NR1H2P55055 AL078601.3-201ENST00000573303 535 ntBASIC5.69□□□□□ -1.5
NR1H2P55055 MIR4660-201ENST00000583549 74 ntBASIC5.69□□□□□ -1.5
NR1H2P55055 AC090616.1-201ENST00000583895 447 ntBASIC5.69□□□□□ -1.5
NR1H2P55055 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.69□□□□□ -1.5
NR1H2P55055 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC5.69□□□□□ -1.5
NR1H2P55055 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC5.69□□□□□ -1.5
NR1H2P55055 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.69□□□□□ -1.5
NR1H2P55055 IGKV2OR2-1-201ENST00000605129 304 ntBASIC5.69□□□□□ -1.5
NR1H2P55055 AC012557.1-201ENST00000607115 611 ntBASIC5.69□□□□□ -1.5
NR1H2P55055 AC015712.7-201ENST00000615211 635 ntBASIC5.69□□□□□ -1.5
NR1H2P55055 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
NR1H2P55055 AC097460.3-201ENST00000623099 442 ntBASIC5.69□□□□□ -1.5
NR1H2P55055 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
NR1H2P55055 AC106858.1-201ENST00000637497 429 ntBASIC5.69□□□□□ -1.5
NR1H2P55055 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NR1H2P55055 SAGE3P-201ENST00000619800 1635 ntBASIC5.69□□□□□ -1.5
NR1H2P55055 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NR1H2P55055 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC5.69□□□□□ -1.5
NR1H2P55055 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NR1H2P55055 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.69□□□□□ -1.5
NR1H2P55055 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.69□□□□□ -1.5
NR1H2P55055 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
NR1H2P55055 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
NR1H2P55055 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC5.69□□□□□ -1.5
NR1H2P55055 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
NR1H2P55055 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC5.68□□□□□ -1.5
NR1H2P55055 LINC02019-201ENST00000608605 2060 ntBASIC5.68□□□□□ -1.5
NR1H2P55055 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
NR1H2P55055 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
NR1H2P55055 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.68□□□□□ -1.5
NR1H2P55055 HSPD1P9-201ENST00000420325 1636 ntBASIC5.68□□□□□ -1.5
NR1H2P55055 AC027228.2-201ENST00000567141 2154 ntBASIC5.68□□□□□ -1.5
NR1H2P55055 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
NR1H2P55055 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
NR1H2P55055 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
NR1H2P55055 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms