Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
HLA-DMBP28068 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC4.21□□□□□ -1.74
HLA-DMBP28068 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HLA-DMBP28068 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.21□□□□□ -1.74
HLA-DMBP28068 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.21□□□□□ -1.74
HLA-DMBP28068 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
HLA-DMBP28068 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HLA-DMBP28068 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC4.21□□□□□ -1.74
HLA-DMBP28068 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HLA-DMBP28068 PHACTR2P1-201ENST00000605639 1414 ntBASIC4.21□□□□□ -1.74
HLA-DMBP28068 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HLA-DMBP28068 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
HLA-DMBP28068 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
HLA-DMBP28068 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
HLA-DMBP28068 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
HLA-DMBP28068 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HLA-DMBP28068 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.2□□□□□ -1.74
HLA-DMBP28068 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
HLA-DMBP28068 MIR375-201ENST00000362103 64 ntBASIC4.2□□□□□ -1.74
HLA-DMBP28068 OR7E101P-201ENST00000400428 513 ntBASIC4.2□□□□□ -1.74
HLA-DMBP28068 AL009179.1-201ENST00000406085 265 ntBASIC4.2□□□□□ -1.74
HLA-DMBP28068 METTL5-204ENST00000409340 472 ntTSL 5 BASIC4.2□□□□□ -1.74
HLA-DMBP28068 LSM5-203ENST00000409782 649 ntTSL 5 BASIC4.2□□□□□ -1.74
HLA-DMBP28068 RN7SKP206-201ENST00000410823 293 ntBASIC4.2□□□□□ -1.74
HLA-DMBP28068 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC4.2□□□□□ -1.74
HLA-DMBP28068 RNF10P1-201ENST00000418589 369 ntBASIC4.2□□□□□ -1.74
HLA-DMBP28068 AK4P4-201ENST00000419465 646 ntBASIC4.2□□□□□ -1.74
HLA-DMBP28068 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC4.2□□□□□ -1.74
HLA-DMBP28068 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC4.2□□□□□ -1.74
HLA-DMBP28068 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC4.2□□□□□ -1.74
HLA-DMBP28068 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC4.2□□□□□ -1.74
HLA-DMBP28068 AC006335.2-201ENST00000437993 330 ntBASIC4.2□□□□□ -1.74
HLA-DMBP28068 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC4.2□□□□□ -1.74
HLA-DMBP28068 AL596266.1-201ENST00000448132 400 ntBASIC4.2□□□□□ -1.74
HLA-DMBP28068 YWHAEP1-201ENST00000453697 763 ntBASIC4.2□□□□□ -1.74
HLA-DMBP28068 TAAR4P-201ENST00000454843 1039 ntBASIC4.2□□□□□ -1.74
HLA-DMBP28068 AC022215.1-201ENST00000481770 362 ntBASIC4.2□□□□□ -1.74
HLA-DMBP28068 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.2□□□□□ -1.74
HLA-DMBP28068 SUMO2P4-201ENST00000504193 276 ntBASIC4.2□□□□□ -1.74
HLA-DMBP28068 AC109481.1-201ENST00000509173 282 ntBASIC4.2□□□□□ -1.74
HLA-DMBP28068 AC011411.1-201ENST00000509592 876 ntBASIC4.2□□□□□ -1.74
HLA-DMBP28068 RNU6-1334P-201ENST00000516032 105 ntBASIC4.2□□□□□ -1.74
HLA-DMBP28068 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.2□□□□□ -1.74
HLA-DMBP28068 CYCSP22-201ENST00000517555 339 ntBASIC4.2□□□□□ -1.74
HLA-DMBP28068 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC4.2□□□□□ -1.74
HLA-DMBP28068 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
HLA-DMBP28068 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC4.2□□□□□ -1.74
HLA-DMBP28068 AL359715.3-201ENST00000569267 2123 ntBASIC4.2□□□□□ -1.74
HLA-DMBP28068 MIR4311-201ENST00000580794 100 ntBASIC4.2□□□□□ -1.74
HLA-DMBP28068 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC4.2□□□□□ -1.74
HLA-DMBP28068 FAM72A-208ENST00000607379 1139 ntBASIC4.2□□□□□ -1.74
HLA-DMBP28068 AL122125.1-201ENST00000616999 600 ntBASIC4.2□□□□□ -1.74
HLA-DMBP28068 AC016542.2-201ENST00000624201 619 ntBASIC4.2□□□□□ -1.74
HLA-DMBP28068 AL390318.1-201ENST00000624564 687 ntBASIC4.2□□□□□ -1.74
HLA-DMBP28068 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC4.2□□□□□ -1.74
HLA-DMBP28068 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC4.2□□□□□ -1.74
HLA-DMBP28068 AL162456.1-201ENST00000634535 2006 ntBASIC4.2□□□□□ -1.74
HLA-DMBP28068 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.2□□□□□ -1.74
HLA-DMBP28068 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC4.2□□□□□ -1.74
HLA-DMBP28068 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.2□□□□□ -1.74
HLA-DMBP28068 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC4.2□□□□□ -1.74
HLA-DMBP28068 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HLA-DMBP28068 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
HLA-DMBP28068 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC4.2□□□□□ -1.74
HLA-DMBP28068 AC003973.3-201ENST00000624863 2822 ntBASIC4.2□□□□□ -1.74
HLA-DMBP28068 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
HLA-DMBP28068 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
HLA-DMBP28068 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
HLA-DMBP28068 LARS-201ENST00000274562 2213 ntTSL 2 BASIC4.19□□□□□ -1.74
HLA-DMBP28068 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
HLA-DMBP28068 MT-RNR2-201ENST00000387347 1559 ntBASIC4.19□□□□□ -1.74
HLA-DMBP28068 AL034549.2-201ENST00000618285 3373 ntBASIC4.19□□□□□ -1.74
HLA-DMBP28068 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
HLA-DMBP28068 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC4.19□□□□□ -1.74
HLA-DMBP28068 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC4.19□□□□□ -1.74
HLA-DMBP28068 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
HLA-DMBP28068 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.19□□□□□ -1.74
HLA-DMBP28068 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC4.19□□□□□ -1.74
HLA-DMBP28068 MAPK6PS2-201ENST00000379571 2060 ntBASIC4.19□□□□□ -1.74
HLA-DMBP28068 RN7SKP292-201ENST00000365522 317 ntBASIC4.19□□□□□ -1.74
HLA-DMBP28068 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC4.19□□□□□ -1.74
HLA-DMBP28068 AL512422.1-201ENST00000407033 553 ntBASIC4.19□□□□□ -1.74
HLA-DMBP28068 RN7SKP286-201ENST00000410894 299 ntBASIC4.19□□□□□ -1.74
HLA-DMBP28068 GPS2P1-201ENST00000411761 986 ntBASIC4.19□□□□□ -1.74
HLA-DMBP28068 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC4.19□□□□□ -1.74
HLA-DMBP28068 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
HLA-DMBP28068 AC127526.2-201ENST00000426436 775 ntBASIC4.19□□□□□ -1.74
HLA-DMBP28068 HSPE1P16-201ENST00000426640 348 ntBASIC4.19□□□□□ -1.74
HLA-DMBP28068 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC4.19□□□□□ -1.74
HLA-DMBP28068 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC4.19□□□□□ -1.74
HLA-DMBP28068 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC4.19□□□□□ -1.74
HLA-DMBP28068 AC064862.4-201ENST00000442180 334 ntBASIC4.19□□□□□ -1.74
HLA-DMBP28068 IGBP1P3-201ENST00000447449 1000 ntBASIC4.19□□□□□ -1.74
HLA-DMBP28068 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC4.19□□□□□ -1.74
HLA-DMBP28068 CBX1P2-201ENST00000453841 458 ntBASIC4.19□□□□□ -1.74
HLA-DMBP28068 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
HLA-DMBP28068 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC4.19□□□□□ -1.74
HLA-DMBP28068 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC4.19□□□□□ -1.74
HLA-DMBP28068 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC4.19□□□□□ -1.74
HLA-DMBP28068 RN7SL101P-201ENST00000496350 279 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 168.6 ms