Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
HMGA1P17096 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
HMGA1P17096 MIR550A3-201ENST00000390735 95 ntBASIC5.52□□□□□ -1.53
HMGA1P17096 AL645733.1-201ENST00000402250 217 ntBASIC5.52□□□□□ -1.53
HMGA1P17096 AC093162.1-201ENST00000419682 124 ntBASIC5.52□□□□□ -1.53
HMGA1P17096 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.52□□□□□ -1.53
HMGA1P17096 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HMGA1P17096 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.52□□□□□ -1.53
HMGA1P17096 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.52□□□□□ -1.53
HMGA1P17096 AC079168.1-201ENST00000458741 345 ntBASIC5.52□□□□□ -1.53
HMGA1P17096 GLUD1P3-202ENST00000508551 200 ntBASIC5.52□□□□□ -1.53
HMGA1P17096 GTF2F2P1-201ENST00000511083 675 ntBASIC5.52□□□□□ -1.53
HMGA1P17096 AC013701.1-201ENST00000522657 465 ntBASIC5.52□□□□□ -1.53
HMGA1P17096 AC092490.3-201ENST00000545370 572 ntBASIC5.52□□□□□ -1.53
HMGA1P17096 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.52□□□□□ -1.53
HMGA1P17096 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
HMGA1P17096 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
HMGA1P17096 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
HMGA1P17096 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
HMGA1P17096 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
HMGA1P17096 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HMGA1P17096 OR1F2P-201ENST00000570470 933 ntBASIC5.52□□□□□ -1.53
HMGA1P17096 MIR4420-201ENST00000583944 77 ntBASIC5.52□□□□□ -1.53
HMGA1P17096 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
HMGA1P17096 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.52□□□□□ -1.53
HMGA1P17096 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HMGA1P17096 AC099654.6-201ENST00000636487 512 ntBASIC5.52□□□□□ -1.53
HMGA1P17096 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
HMGA1P17096 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
HMGA1P17096 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HMGA1P17096 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC5.52□□□□□ -1.53
HMGA1P17096 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HMGA1P17096 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HMGA1P17096 AC023421.1-201ENST00000590535 1785 ntBASIC5.52□□□□□ -1.53
HMGA1P17096 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
HMGA1P17096 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC5.52□□□□□ -1.53
HMGA1P17096 AC131971.1-201ENST00000332881 1482 ntBASIC5.51□□□□□ -1.53
HMGA1P17096 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
HMGA1P17096 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC5.51□□□□□ -1.53
HMGA1P17096 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.51□□□□□ -1.53
HMGA1P17096 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
HMGA1P17096 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.51□□□□□ -1.53
HMGA1P17096 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
HMGA1P17096 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HMGA1P17096 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HMGA1P17096 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
HMGA1P17096 RNU4-4P-201ENST00000364588 130 ntBASIC5.51□□□□□ -1.53
HMGA1P17096 MIR600-201ENST00000385007 98 ntBASIC5.51□□□□□ -1.53
HMGA1P17096 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.51□□□□□ -1.53
HMGA1P17096 MIR1182-201ENST00000408363 97 ntBASIC5.51□□□□□ -1.53
HMGA1P17096 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.51□□□□□ -1.53
HMGA1P17096 RPS26P13-201ENST00000419030 330 ntBASIC5.51□□□□□ -1.53
HMGA1P17096 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HMGA1P17096 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC5.51□□□□□ -1.53
HMGA1P17096 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.51□□□□□ -1.53
HMGA1P17096 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HMGA1P17096 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.51□□□□□ -1.53
HMGA1P17096 AP002373.2-201ENST00000541631 1060 ntBASIC5.51□□□□□ -1.53
HMGA1P17096 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC5.51□□□□□ -1.53
HMGA1P17096 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
HMGA1P17096 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.51□□□□□ -1.53
HMGA1P17096 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.51□□□□□ -1.53
HMGA1P17096 AC009597.2-201ENST00000604659 592 ntBASIC5.51□□□□□ -1.53
HMGA1P17096 AL162431.4-201ENST00000604674 411 ntBASIC5.51□□□□□ -1.53
HMGA1P17096 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HMGA1P17096 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.51□□□□□ -1.53
HMGA1P17096 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HMGA1P17096 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HMGA1P17096 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
HMGA1P17096 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.51□□□□□ -1.53
HMGA1P17096 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC5.51□□□□□ -1.53
HMGA1P17096 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HMGA1P17096 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.51□□□□□ -1.53
HMGA1P17096 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.51□□□□□ -1.53
HMGA1P17096 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.51□□□□□ -1.53
HMGA1P17096 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HMGA1P17096 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
HMGA1P17096 CASC19-281ENST00000642118 1554 ntBASIC5.5□□□□□ -1.53
HMGA1P17096 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
HMGA1P17096 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
HMGA1P17096 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
HMGA1P17096 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.5□□□□□ -1.53
HMGA1P17096 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
HMGA1P17096 AC092681.1-201ENST00000297369 291 ntBASIC5.5□□□□□ -1.53
HMGA1P17096 SNURFL-201ENST00000309296 343 ntBASIC5.5□□□□□ -1.53
HMGA1P17096 RN7SKP185-201ENST00000362813 326 ntBASIC5.5□□□□□ -1.53
HMGA1P17096 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
HMGA1P17096 AL133270.1-201ENST00000402635 279 ntBASIC5.5□□□□□ -1.53
HMGA1P17096 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
HMGA1P17096 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC5.5□□□□□ -1.53
HMGA1P17096 NDUFB5P1-201ENST00000508134 564 ntBASIC5.5□□□□□ -1.53
HMGA1P17096 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.5□□□□□ -1.53
HMGA1P17096 EIF3KP3-201ENST00000514461 639 ntBASIC5.5□□□□□ -1.53
HMGA1P17096 AP000676.2-201ENST00000529711 301 ntBASIC5.5□□□□□ -1.53
HMGA1P17096 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.5□□□□□ -1.53
HMGA1P17096 AP002884.5-201ENST00000595053 1132 ntBASIC5.5□□□□□ -1.53
HMGA1P17096 AC108738.1-201ENST00000603703 237 ntBASIC5.5□□□□□ -1.53
HMGA1P17096 AC015660.5-201ENST00000623238 564 ntBASIC5.5□□□□□ -1.53
HMGA1P17096 AC005618.4-201ENST00000625053 554 ntBASIC5.5□□□□□ -1.53
HMGA1P17096 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms