Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AC095052.1-201ENST00000509955 863 ntBASIC4.11□□□□□ -1.75
HLA-DQA1P01909 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC4.11□□□□□ -1.75
HLA-DQA1P01909 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC4.11□□□□□ -1.75
HLA-DQA1P01909 AC116917.1-201ENST00000520558 305 ntBASIC4.11□□□□□ -1.75
HLA-DQA1P01909 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC4.11□□□□□ -1.75
HLA-DQA1P01909 FAU-203ENST00000525297 355 ntTSL 5 BASIC4.11□□□□□ -1.75
HLA-DQA1P01909 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC4.11□□□□□ -1.75
HLA-DQA1P01909 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HLA-DQA1P01909 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC4.11□□□□□ -1.75
HLA-DQA1P01909 MTND2P17-201ENST00000550281 688 ntBASIC4.11□□□□□ -1.75
HLA-DQA1P01909 CLMN-206ENST00000556441 452 ntTSL 5 BASIC4.11□□□□□ -1.75
HLA-DQA1P01909 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC4.11□□□□□ -1.75
HLA-DQA1P01909 OR1E3-201ENST00000575608 948 ntBASIC4.11□□□□□ -1.75
HLA-DQA1P01909 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC4.11□□□□□ -1.75
HLA-DQA1P01909 AC012254.3-201ENST00000591183 2117 ntBASIC4.11□□□□□ -1.75
HLA-DQA1P01909 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC4.11□□□□□ -1.75
HLA-DQA1P01909 AC068768.2-201ENST00000602352 343 ntBASIC4.11□□□□□ -1.75
HLA-DQA1P01909 AC073333.2-201ENST00000603589 769 ntBASIC4.11□□□□□ -1.75
HLA-DQA1P01909 AL135999.3-201ENST00000610501 812 ntBASIC4.11□□□□□ -1.75
HLA-DQA1P01909 AP003400.2-201ENST00000624036 666 ntBASIC4.11□□□□□ -1.75
HLA-DQA1P01909 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC4.11□□□□□ -1.75
HLA-DQA1P01909 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC4.11□□□□□ -1.75
HLA-DQA1P01909 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC4.11□□□□□ -1.75
HLA-DQA1P01909 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC4.11□□□□□ -1.75
HLA-DQA1P01909 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC4.11□□□□□ -1.75
HLA-DQA1P01909 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
HLA-DQA1P01909 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HLA-DQA1P01909 SSXP3-201ENST00000442971 1300 ntBASIC4.11□□□□□ -1.75
HLA-DQA1P01909 AC233968.1-201ENST00000611212 1300 ntBASIC4.11□□□□□ -1.75
HLA-DQA1P01909 AL929601.4-201ENST00000613011 1341 ntBASIC4.11□□□□□ -1.75
HLA-DQA1P01909 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.11□□□□□ -1.75
HLA-DQA1P01909 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
HLA-DQA1P01909 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HLA-DQA1P01909 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.11□□□□□ -1.75
HLA-DQA1P01909 AC126323.6-202ENST00000568092 3511 ntBASIC4.11□□□□□ -1.75
HLA-DQA1P01909 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
HLA-DQA1P01909 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HLA-DQA1P01909 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.1□□□□□ -1.75
HLA-DQA1P01909 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.1□□□□□ -1.75
HLA-DQA1P01909 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HLA-DQA1P01909 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HLA-DQA1P01909 AL513548.1-201ENST00000562904 1724 ntBASIC4.1□□□□□ -1.75
HLA-DQA1P01909 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.1□□□□□ -1.75
HLA-DQA1P01909 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HLA-DQA1P01909 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HLA-DQA1P01909 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
HLA-DQA1P01909 RNU6-249P-201ENST00000363016 102 ntBASIC4.1□□□□□ -1.75
HLA-DQA1P01909 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
HLA-DQA1P01909 AC005522.1-201ENST00000395416 346 ntBASIC4.1□□□□□ -1.75
HLA-DQA1P01909 HSD17B7P1-201ENST00000412419 1017 ntBASIC4.1□□□□□ -1.75
HLA-DQA1P01909 GAS5-202ENST00000414075 413 ntTSL 2 BASIC4.1□□□□□ -1.75
HLA-DQA1P01909 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC4.1□□□□□ -1.75
HLA-DQA1P01909 OR5M12P-201ENST00000423388 929 ntBASIC4.1□□□□□ -1.75
HLA-DQA1P01909 AC092865.3-201ENST00000425390 1026 ntBASIC4.1□□□□□ -1.75
HLA-DQA1P01909 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.1□□□□□ -1.75
HLA-DQA1P01909 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC4.1□□□□□ -1.75
HLA-DQA1P01909 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC4.1□□□□□ -1.75
HLA-DQA1P01909 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC4.1□□□□□ -1.75
HLA-DQA1P01909 SEPT7P3-201ENST00000455017 621 ntBASIC4.1□□□□□ -1.75
HLA-DQA1P01909 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC4.1□□□□□ -1.75
HLA-DQA1P01909 TRBV8-1-201ENST00000481590 279 ntBASIC4.1□□□□□ -1.75
HLA-DQA1P01909 AC099521.1-201ENST00000482557 334 ntBASIC4.1□□□□□ -1.75
HLA-DQA1P01909 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC4.1□□□□□ -1.75
HLA-DQA1P01909 AC112484.3-201ENST00000505910 329 ntBASIC4.1□□□□□ -1.75
HLA-DQA1P01909 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC4.1□□□□□ -1.75
HLA-DQA1P01909 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HLA-DQA1P01909 LDHAP1-201ENST00000509421 992 ntBASIC4.1□□□□□ -1.75
HLA-DQA1P01909 GAPDHP71-201ENST00000511530 1003 ntBASIC4.1□□□□□ -1.75
HLA-DQA1P01909 HMGN1P17-201ENST00000513734 295 ntBASIC4.1□□□□□ -1.75
HLA-DQA1P01909 ZNF519P4-201ENST00000514008 125 ntBASIC4.1□□□□□ -1.75
HLA-DQA1P01909 RNA5SP303-201ENST00000516192 130 ntBASIC4.1□□□□□ -1.75
HLA-DQA1P01909 RNU6-943P-201ENST00000516960 98 ntBASIC4.1□□□□□ -1.75
HLA-DQA1P01909 TRIM51DP-201ENST00000529746 596 ntBASIC4.1□□□□□ -1.75
HLA-DQA1P01909 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
HLA-DQA1P01909 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC4.1□□□□□ -1.75
HLA-DQA1P01909 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.1□□□□□ -1.75
HLA-DQA1P01909 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC4.1□□□□□ -1.75
HLA-DQA1P01909 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HLA-DQA1P01909 AL390334.1-201ENST00000556395 450 ntBASIC4.1□□□□□ -1.75
HLA-DQA1P01909 AC121758.1-202ENST00000556917 658 ntBASIC4.1□□□□□ -1.75
HLA-DQA1P01909 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC4.1□□□□□ -1.75
HLA-DQA1P01909 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC4.1□□□□□ -1.75
HLA-DQA1P01909 AC007346.1-201ENST00000569208 867 ntBASIC4.1□□□□□ -1.75
HLA-DQA1P01909 AC022884.2-201ENST00000578535 580 ntBASIC4.1□□□□□ -1.75
HLA-DQA1P01909 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.1□□□□□ -1.75
HLA-DQA1P01909 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC4.1□□□□□ -1.75
HLA-DQA1P01909 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC4.1□□□□□ -1.75
HLA-DQA1P01909 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC4.1□□□□□ -1.75
HLA-DQA1P01909 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.1□□□□□ -1.75
HLA-DQA1P01909 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC4.1□□□□□ -1.75
HLA-DQA1P01909 FAM27E2-201ENST00000619668 403 ntBASIC4.1□□□□□ -1.75
HLA-DQA1P01909 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
HLA-DQA1P01909 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
HLA-DQA1P01909 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
HLA-DQA1P01909 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.1□□□□□ -1.75
HLA-DQA1P01909 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
HLA-DQA1P01909 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HLA-DQA1P01909 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HLA-DQA1P01909 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
HLA-DQA1P01909 MTCO1P28-201ENST00000574177 1528 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms