Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
ATG4BQ9Y4P1 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.3□□□□□ -1.56
ATG4BQ9Y4P1 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
ATG4BQ9Y4P1 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
ATG4BQ9Y4P1 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
ATG4BQ9Y4P1 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.3□□□□□ -1.56
ATG4BQ9Y4P1 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
ATG4BQ9Y4P1 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.3□□□□□ -1.56
ATG4BQ9Y4P1 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
ATG4BQ9Y4P1 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
ATG4BQ9Y4P1 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
ATG4BQ9Y4P1 MIR133A2-201ENST00000347538 102 ntBASIC5.3□□□□□ -1.56
ATG4BQ9Y4P1 RNU6-1331P-201ENST00000363658 106 ntBASIC5.3□□□□□ -1.56
ATG4BQ9Y4P1 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.3□□□□□ -1.56
ATG4BQ9Y4P1 RN7SKP206-201ENST00000410823 293 ntBASIC5.3□□□□□ -1.56
ATG4BQ9Y4P1 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.3□□□□□ -1.56
ATG4BQ9Y4P1 AC113412.1-201ENST00000425840 504 ntBASIC5.3□□□□□ -1.56
ATG4BQ9Y4P1 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC5.3□□□□□ -1.56
ATG4BQ9Y4P1 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC5.3□□□□□ -1.56
ATG4BQ9Y4P1 MTND6P5-201ENST00000448266 512 ntBASIC5.3□□□□□ -1.56
ATG4BQ9Y4P1 AP000547.1-201ENST00000454360 617 ntBASIC5.3□□□□□ -1.56
ATG4BQ9Y4P1 ATP5LP5-201ENST00000483050 299 ntBASIC5.3□□□□□ -1.56
ATG4BQ9Y4P1 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.3□□□□□ -1.56
ATG4BQ9Y4P1 HMGB3P14-201ENST00000494195 599 ntBASIC5.3□□□□□ -1.56
ATG4BQ9Y4P1 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.3□□□□□ -1.56
ATG4BQ9Y4P1 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.3□□□□□ -1.56
ATG4BQ9Y4P1 TMEM97P2-201ENST00000517841 403 ntBASIC5.3□□□□□ -1.56
ATG4BQ9Y4P1 PMS2P3-207ENST00000529061 717 ntBASIC5.3□□□□□ -1.56
ATG4BQ9Y4P1 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.3□□□□□ -1.56
ATG4BQ9Y4P1 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.3□□□□□ -1.56
ATG4BQ9Y4P1 AC027544.3-201ENST00000535082 757 ntBASIC5.3□□□□□ -1.56
ATG4BQ9Y4P1 AC122688.1-201ENST00000541494 223 ntBASIC5.3□□□□□ -1.56
ATG4BQ9Y4P1 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.3□□□□□ -1.56
ATG4BQ9Y4P1 IGBP1P1-201ENST00000554337 1009 ntBASIC5.3□□□□□ -1.56
ATG4BQ9Y4P1 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.3□□□□□ -1.56
ATG4BQ9Y4P1 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.3□□□□□ -1.56
ATG4BQ9Y4P1 AC018809.2-201ENST00000602436 3823 ntBASIC5.3□□□□□ -1.56
ATG4BQ9Y4P1 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC5.3□□□□□ -1.56
ATG4BQ9Y4P1 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.3□□□□□ -1.56
ATG4BQ9Y4P1 RN7SL787P-201ENST00000613000 284 ntBASIC5.3□□□□□ -1.56
ATG4BQ9Y4P1 MIR6729-201ENST00000618194 65 ntBASIC5.3□□□□□ -1.56
ATG4BQ9Y4P1 AC243960.7-201ENST00000623532 707 ntBASIC5.3□□□□□ -1.56
ATG4BQ9Y4P1 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
ATG4BQ9Y4P1 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.3□□□□□ -1.56
ATG4BQ9Y4P1 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
ATG4BQ9Y4P1 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
ATG4BQ9Y4P1 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
ATG4BQ9Y4P1 AC114786.1-201ENST00000512892 1415 ntBASIC5.3□□□□□ -1.56
ATG4BQ9Y4P1 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC5.3□□□□□ -1.56
ATG4BQ9Y4P1 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
ATG4BQ9Y4P1 AC144833.1-201ENST00000567953 4089 ntBASIC5.29□□□□□ -1.56
ATG4BQ9Y4P1 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
ATG4BQ9Y4P1 PROS2P-201ENST00000474651 1951 ntBASIC5.29□□□□□ -1.56
ATG4BQ9Y4P1 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
ATG4BQ9Y4P1 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
ATG4BQ9Y4P1 CDC27P2-201ENST00000425026 1922 ntBASIC5.29□□□□□ -1.56
ATG4BQ9Y4P1 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
ATG4BQ9Y4P1 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
ATG4BQ9Y4P1 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.29□□□□□ -1.56
ATG4BQ9Y4P1 BCORP1-203ENST00000513194 5093 ntBASIC5.29□□□□□ -1.56
ATG4BQ9Y4P1 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
ATG4BQ9Y4P1 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.29□□□□□ -1.56
ATG4BQ9Y4P1 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.29□□□□□ -1.56
ATG4BQ9Y4P1 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.29□□□□□ -1.56
ATG4BQ9Y4P1 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
ATG4BQ9Y4P1 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
ATG4BQ9Y4P1 MIR323A-201ENST00000362199 86 ntBASIC5.29□□□□□ -1.56
ATG4BQ9Y4P1 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.29□□□□□ -1.56
ATG4BQ9Y4P1 AL009179.1-201ENST00000406085 265 ntBASIC5.29□□□□□ -1.56
ATG4BQ9Y4P1 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
ATG4BQ9Y4P1 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
ATG4BQ9Y4P1 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.29□□□□□ -1.56
ATG4BQ9Y4P1 RPL5P2-201ENST00000429598 854 ntBASIC5.29□□□□□ -1.56
ATG4BQ9Y4P1 Z84478.1-201ENST00000438230 1219 ntBASIC5.29□□□□□ -1.56
ATG4BQ9Y4P1 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
ATG4BQ9Y4P1 EEF1B2P6-201ENST00000445713 673 ntBASIC5.29□□□□□ -1.56
ATG4BQ9Y4P1 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC5.29□□□□□ -1.56
ATG4BQ9Y4P1 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC5.29□□□□□ -1.56
ATG4BQ9Y4P1 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.29□□□□□ -1.56
ATG4BQ9Y4P1 RPS27AP2-201ENST00000457576 465 ntBASIC5.29□□□□□ -1.56
ATG4BQ9Y4P1 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
ATG4BQ9Y4P1 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.29□□□□□ -1.56
ATG4BQ9Y4P1 RN7SL284P-201ENST00000498823 275 ntBASIC5.29□□□□□ -1.56
ATG4BQ9Y4P1 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.29□□□□□ -1.56
ATG4BQ9Y4P1 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.29□□□□□ -1.56
ATG4BQ9Y4P1 GLUD1P3-202ENST00000508551 200 ntBASIC5.29□□□□□ -1.56
ATG4BQ9Y4P1 AC106872.4-201ENST00000510050 523 ntBASIC5.29□□□□□ -1.56
ATG4BQ9Y4P1 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.29□□□□□ -1.56
ATG4BQ9Y4P1 OR8Q1P-201ENST00000526467 655 ntBASIC5.29□□□□□ -1.56
ATG4BQ9Y4P1 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
ATG4BQ9Y4P1 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.29□□□□□ -1.56
ATG4BQ9Y4P1 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.29□□□□□ -1.56
ATG4BQ9Y4P1 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.29□□□□□ -1.56
ATG4BQ9Y4P1 RN7SL753P-201ENST00000581238 290 ntBASIC5.29□□□□□ -1.56
ATG4BQ9Y4P1 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.29□□□□□ -1.56
ATG4BQ9Y4P1 AC025574.2-201ENST00000615621 514 ntBASIC5.29□□□□□ -1.56
ATG4BQ9Y4P1 AC002044.3-201ENST00000623314 541 ntBASIC5.29□□□□□ -1.56
ATG4BQ9Y4P1 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
ATG4BQ9Y4P1 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.29□□□□□ -1.56
ATG4BQ9Y4P1 YES1P1-201ENST00000418510 1628 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms