Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AC002069.2-201ENST00000603580 883 ntBASIC6.56□□□□□ -1.36
CLIP2Q9UDT6 HIRAP1-201ENST00000605318 787 ntBASIC6.56□□□□□ -1.36
CLIP2Q9UDT6 AC025574.2-201ENST00000615621 514 ntBASIC6.56□□□□□ -1.36
CLIP2Q9UDT6 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC6.56□□□□□ -1.36
CLIP2Q9UDT6 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CLIP2Q9UDT6 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
CLIP2Q9UDT6 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC6.56□□□□□ -1.36
CLIP2Q9UDT6 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CLIP2Q9UDT6 CYP4Z2P-201ENST00000423332 1512 ntBASIC6.55□□□□□ -1.36
CLIP2Q9UDT6 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
CLIP2Q9UDT6 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CLIP2Q9UDT6 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
CLIP2Q9UDT6 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CLIP2Q9UDT6 FGG-205ENST00000407946 1636 ntTSL 5 BASIC6.55□□□□□ -1.36
CLIP2Q9UDT6 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6.55□□□□□ -1.36
CLIP2Q9UDT6 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
CLIP2Q9UDT6 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC6.55□□□□□ -1.36
CLIP2Q9UDT6 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC6.55□□□□□ -1.36
CLIP2Q9UDT6 BPHL-201ENST00000380368 797 ntTSL 5 BASIC6.55□□□□□ -1.36
CLIP2Q9UDT6 SNORA5.1-201ENST00000384275 131 ntBASIC6.55□□□□□ -1.36
CLIP2Q9UDT6 AC096921.1-201ENST00000411661 375 ntBASIC6.55□□□□□ -1.36
CLIP2Q9UDT6 AL355433.1-201ENST00000422804 300 ntBASIC6.55□□□□□ -1.36
CLIP2Q9UDT6 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC6.55□□□□□ -1.36
CLIP2Q9UDT6 OR6D1P-201ENST00000436165 939 ntBASIC6.55□□□□□ -1.36
CLIP2Q9UDT6 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC6.55□□□□□ -1.36
CLIP2Q9UDT6 RPS23P9-201ENST00000448848 438 ntBASIC6.55□□□□□ -1.36
CLIP2Q9UDT6 RN7SL51P-201ENST00000468230 285 ntBASIC6.55□□□□□ -1.36
CLIP2Q9UDT6 EIF1P7-201ENST00000487533 337 ntBASIC6.55□□□□□ -1.36
CLIP2Q9UDT6 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC6.55□□□□□ -1.36
CLIP2Q9UDT6 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC6.55□□□□□ -1.36
CLIP2Q9UDT6 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC6.55□□□□□ -1.36
CLIP2Q9UDT6 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC6.55□□□□□ -1.36
CLIP2Q9UDT6 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC6.55□□□□□ -1.36
CLIP2Q9UDT6 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC6.55□□□□□ -1.36
CLIP2Q9UDT6 AC125612.1-201ENST00000547580 377 ntBASIC6.55□□□□□ -1.36
CLIP2Q9UDT6 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CLIP2Q9UDT6 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC6.55□□□□□ -1.36
CLIP2Q9UDT6 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC6.55□□□□□ -1.36
CLIP2Q9UDT6 NANOGP3-201ENST00000605855 286 ntBASIC6.55□□□□□ -1.36
CLIP2Q9UDT6 AL118522.2-201ENST00000616045 615 ntBASIC6.55□□□□□ -1.36
CLIP2Q9UDT6 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
CLIP2Q9UDT6 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC6.55□□□□□ -1.36
CLIP2Q9UDT6 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC6.55□□□□□ -1.36
CLIP2Q9UDT6 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC6.55□□□□□ -1.36
CLIP2Q9UDT6 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC6.55□□□□□ -1.36
CLIP2Q9UDT6 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC6.55□□□□□ -1.36
CLIP2Q9UDT6 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC6.55□□□□□ -1.36
CLIP2Q9UDT6 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
CLIP2Q9UDT6 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CLIP2Q9UDT6 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
CLIP2Q9UDT6 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CLIP2Q9UDT6 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
CLIP2Q9UDT6 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CLIP2Q9UDT6 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC6.55□□□□□ -1.36
CLIP2Q9UDT6 AP005435.3-201ENST00000531260 3198 ntBASIC6.55□□□□□ -1.36
CLIP2Q9UDT6 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CLIP2Q9UDT6 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
CLIP2Q9UDT6 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CLIP2Q9UDT6 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
CLIP2Q9UDT6 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC6.54□□□□□ -1.36
CLIP2Q9UDT6 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
CLIP2Q9UDT6 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CLIP2Q9UDT6 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
CLIP2Q9UDT6 RN7SKP6-201ENST00000364795 319 ntBASIC6.54□□□□□ -1.36
CLIP2Q9UDT6 AC009804.1-201ENST00000400949 179 ntBASIC6.54□□□□□ -1.36
CLIP2Q9UDT6 AL009179.1-201ENST00000406085 265 ntBASIC6.54□□□□□ -1.36
CLIP2Q9UDT6 RPL35AP24-201ENST00000413846 330 ntBASIC6.54□□□□□ -1.36
CLIP2Q9UDT6 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC6.54□□□□□ -1.36
CLIP2Q9UDT6 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC6.54□□□□□ -1.36
CLIP2Q9UDT6 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC6.54□□□□□ -1.36
CLIP2Q9UDT6 AC011225.1-201ENST00000457751 369 ntBASIC6.54□□□□□ -1.36
CLIP2Q9UDT6 NPM1P28-201ENST00000492269 840 ntBASIC6.54□□□□□ -1.36
CLIP2Q9UDT6 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC6.54□□□□□ -1.36
CLIP2Q9UDT6 AC021146.10-201ENST00000515628 706 ntBASIC6.54□□□□□ -1.36
CLIP2Q9UDT6 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC6.54□□□□□ -1.36
CLIP2Q9UDT6 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC6.54□□□□□ -1.36
CLIP2Q9UDT6 MIR1269B-201ENST00000580405 75 ntBASIC6.54□□□□□ -1.36
CLIP2Q9UDT6 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC6.54□□□□□ -1.36
CLIP2Q9UDT6 AC012616.1-201ENST00000600294 197 ntBASIC6.54□□□□□ -1.36
CLIP2Q9UDT6 AL353729.2-201ENST00000605859 1249 ntBASIC6.54□□□□□ -1.36
CLIP2Q9UDT6 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC6.54□□□□□ -1.36
CLIP2Q9UDT6 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
CLIP2Q9UDT6 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CLIP2Q9UDT6 AC004158.1-201ENST00000564508 4319 ntBASIC6.54□□□□□ -1.36
CLIP2Q9UDT6 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
CLIP2Q9UDT6 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC6.54□□□□□ -1.36
CLIP2Q9UDT6 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC6.54□□□□□ -1.36
CLIP2Q9UDT6 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC6.54□□□□□ -1.36
CLIP2Q9UDT6 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CLIP2Q9UDT6 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC6.53□□□□□ -1.36
CLIP2Q9UDT6 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CLIP2Q9UDT6 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CLIP2Q9UDT6 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC6.53□□□□□ -1.36
CLIP2Q9UDT6 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC6.53□□□□□ -1.36
CLIP2Q9UDT6 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CLIP2Q9UDT6 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CLIP2Q9UDT6 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
CLIP2Q9UDT6 RN7SKP145-201ENST00000363291 303 ntBASIC6.53□□□□□ -1.36
CLIP2Q9UDT6 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CLIP2Q9UDT6 RNU6-233P-201ENST00000410845 141 ntBASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms