Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CCM2LQ9NUG4 AC025260.1-201ENST00000548858 430 ntBASIC6.12□□□□□ -1.43
CCM2LQ9NUG4 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC6.12□□□□□ -1.43
CCM2LQ9NUG4 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC6.12□□□□□ -1.43
CCM2LQ9NUG4 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC6.12□□□□□ -1.43
CCM2LQ9NUG4 AC095057.3-201ENST00000567102 1157 ntBASIC6.12□□□□□ -1.43
CCM2LQ9NUG4 MIR3154-201ENST00000577829 84 ntBASIC6.12□□□□□ -1.43
CCM2LQ9NUG4 MIR4732-201ENST00000581873 76 ntBASIC6.12□□□□□ -1.43
CCM2LQ9NUG4 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC6.12□□□□□ -1.43
CCM2LQ9NUG4 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CCM2LQ9NUG4 AC015802.2-201ENST00000589690 189 ntBASIC6.12□□□□□ -1.43
CCM2LQ9NUG4 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC6.12□□□□□ -1.43
CCM2LQ9NUG4 VN1R78P-201ENST00000597393 564 ntBASIC6.12□□□□□ -1.43
CCM2LQ9NUG4 RPS4XP21-201ENST00000603814 750 ntBASIC6.12□□□□□ -1.43
CCM2LQ9NUG4 AL590032.1-201ENST00000604920 252 ntBASIC6.12□□□□□ -1.43
CCM2LQ9NUG4 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.12□□□□□ -1.43
CCM2LQ9NUG4 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC6.12□□□□□ -1.43
CCM2LQ9NUG4 U6.48-201ENST00000618523 106 ntBASIC6.12□□□□□ -1.43
CCM2LQ9NUG4 AC091304.6-201ENST00000619761 202 ntBASIC6.12□□□□□ -1.43
CCM2LQ9NUG4 RNU6-368P-201ENST00000620928 107 ntBASIC6.12□□□□□ -1.43
CCM2LQ9NUG4 RNU6-538P-201ENST00000622329 107 ntBASIC6.12□□□□□ -1.43
CCM2LQ9NUG4 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC6.12□□□□□ -1.43
CCM2LQ9NUG4 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC6.12□□□□□ -1.43
CCM2LQ9NUG4 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC6.12□□□□□ -1.43
CCM2LQ9NUG4 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
CCM2LQ9NUG4 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
CCM2LQ9NUG4 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.12□□□□□ -1.43
CCM2LQ9NUG4 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.12□□□□□ -1.43
CCM2LQ9NUG4 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.12□□□□□ -1.43
CCM2LQ9NUG4 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CCM2LQ9NUG4 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CCM2LQ9NUG4 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
CCM2LQ9NUG4 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CCM2LQ9NUG4 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
CCM2LQ9NUG4 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.11□□□□□ -1.43
CCM2LQ9NUG4 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
CCM2LQ9NUG4 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
CCM2LQ9NUG4 ZNF806-201ENST00000438300 1774 ntBASIC6.11□□□□□ -1.43
CCM2LQ9NUG4 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC6.11□□□□□ -1.43
CCM2LQ9NUG4 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC6.11□□□□□ -1.43
CCM2LQ9NUG4 BIN2P1-201ENST00000504996 1530 ntBASIC6.11□□□□□ -1.43
CCM2LQ9NUG4 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC6.11□□□□□ -1.43
CCM2LQ9NUG4 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
CCM2LQ9NUG4 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CCM2LQ9NUG4 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
CCM2LQ9NUG4 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
CCM2LQ9NUG4 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
CCM2LQ9NUG4 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CCM2LQ9NUG4 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC6.11□□□□□ -1.43
CCM2LQ9NUG4 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
CCM2LQ9NUG4 Y_RNA.472-201ENST00000384322 102 ntBASIC6.11□□□□□ -1.43
CCM2LQ9NUG4 RNU6-549P-201ENST00000384433 107 ntBASIC6.11□□□□□ -1.43
CCM2LQ9NUG4 SNORA7A-201ENST00000384765 139 ntBASIC6.11□□□□□ -1.43
CCM2LQ9NUG4 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC6.11□□□□□ -1.43
CCM2LQ9NUG4 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC6.11□□□□□ -1.43
CCM2LQ9NUG4 AL121835.1-201ENST00000404250 354 ntBASIC6.11□□□□□ -1.43
CCM2LQ9NUG4 AC013404.1-201ENST00000413068 249 ntBASIC6.11□□□□□ -1.43
CCM2LQ9NUG4 KCND3-AS1-202ENST00000427471 583 ntTSL 3 BASIC6.11□□□□□ -1.43
CCM2LQ9NUG4 KCTD9P1-201ENST00000430462 1167 ntBASIC6.11□□□□□ -1.43
CCM2LQ9NUG4 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC6.11□□□□□ -1.43
CCM2LQ9NUG4 NPM1P23-201ENST00000440193 849 ntBASIC6.11□□□□□ -1.43
CCM2LQ9NUG4 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC6.11□□□□□ -1.43
CCM2LQ9NUG4 CASP3P1-201ENST00000446037 609 ntBASIC6.11□□□□□ -1.43
CCM2LQ9NUG4 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CCM2LQ9NUG4 RN7SL216P-201ENST00000471607 298 ntBASIC6.11□□□□□ -1.43
CCM2LQ9NUG4 RN7SL70P-201ENST00000478322 302 ntBASIC6.11□□□□□ -1.43
CCM2LQ9NUG4 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC6.11□□□□□ -1.43
CCM2LQ9NUG4 AC008565.1-201ENST00000509046 885 ntBASIC6.11□□□□□ -1.43
CCM2LQ9NUG4 AC105313.1-201ENST00000509121 353 ntBASIC6.11□□□□□ -1.43
CCM2LQ9NUG4 B3GNTL1P1-201ENST00000509174 289 ntBASIC6.11□□□□□ -1.43
CCM2LQ9NUG4 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC6.11□□□□□ -1.43
CCM2LQ9NUG4 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC6.11□□□□□ -1.43
CCM2LQ9NUG4 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC6.11□□□□□ -1.43
CCM2LQ9NUG4 MRPS36P3-201ENST00000519284 130 ntBASIC6.11□□□□□ -1.43
CCM2LQ9NUG4 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC6.11□□□□□ -1.43
CCM2LQ9NUG4 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC6.11□□□□□ -1.43
CCM2LQ9NUG4 AC005363.1-201ENST00000530779 351 ntBASIC6.11□□□□□ -1.43
CCM2LQ9NUG4 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC6.11□□□□□ -1.43
CCM2LQ9NUG4 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC6.11□□□□□ -1.43
CCM2LQ9NUG4 ASB8-215ENST00000540782 659 ntTSL 3 BASIC6.11□□□□□ -1.43
CCM2LQ9NUG4 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC6.11□□□□□ -1.43
CCM2LQ9NUG4 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC6.11□□□□□ -1.43
CCM2LQ9NUG4 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
CCM2LQ9NUG4 AC027104.1-201ENST00000563702 681 ntBASIC6.11□□□□□ -1.43
CCM2LQ9NUG4 AL132657.2-201ENST00000564417 358 ntBASIC6.11□□□□□ -1.43
CCM2LQ9NUG4 AC090651.1-201ENST00000567865 634 ntBASIC6.11□□□□□ -1.43
CCM2LQ9NUG4 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC6.11□□□□□ -1.43
CCM2LQ9NUG4 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC6.11□□□□□ -1.43
CCM2LQ9NUG4 AC061975.8-201ENST00000587058 721 ntBASIC6.11□□□□□ -1.43
CCM2LQ9NUG4 AL136084.2-214ENST00000587726 716 ntTSL 5 BASIC6.11□□□□□ -1.43
CCM2LQ9NUG4 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC6.11□□□□□ -1.43
CCM2LQ9NUG4 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC6.11□□□□□ -1.43
CCM2LQ9NUG4 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC6.11□□□□□ -1.43
CCM2LQ9NUG4 AC009237.12-201ENST00000604755 742 ntBASIC6.11□□□□□ -1.43
CCM2LQ9NUG4 AC114878.2-201ENST00000604863 1251 ntBASIC6.11□□□□□ -1.43
CCM2LQ9NUG4 AL138478.1-201ENST00000612252 832 ntBASIC6.11□□□□□ -1.43
CCM2LQ9NUG4 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC6.11□□□□□ -1.43
CCM2LQ9NUG4 MIR6071-201ENST00000616741 78 ntBASIC6.11□□□□□ -1.43
CCM2LQ9NUG4 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC6.11□□□□□ -1.43
CCM2LQ9NUG4 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms