Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 ESRP1-201ENST00000358397 3756 ntAPPRIS ALT1 TSL 1 (best) BASIC7.65□□□□□ -1.19
UBE2OQ9C0C9 ZNF677-206ENST00000598513 3497 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
UBE2OQ9C0C9 FBXW10-201ENST00000301938 3221 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.19
UBE2OQ9C0C9 SLFN12L-201ENST00000260908 3119 ntAPPRIS P2 TSL 5 BASIC7.65□□□□□ -1.19
UBE2OQ9C0C9 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC7.65□□□□□ -1.19
UBE2OQ9C0C9 NRXN1-206ENST00000402717 2508 ntTSL 5 BASIC7.64□□□□□ -1.19
UBE2OQ9C0C9 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC7.64□□□□□ -1.19
UBE2OQ9C0C9 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
UBE2OQ9C0C9 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
UBE2OQ9C0C9 SLC26A5-206ENST00000393727 2270 ntAPPRIS ALT1 TSL 1 (best) BASIC7.64□□□□□ -1.19
UBE2OQ9C0C9 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
UBE2OQ9C0C9 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
UBE2OQ9C0C9 KARSP1-201ENST00000451871 1752 ntBASIC7.64□□□□□ -1.19
UBE2OQ9C0C9 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
UBE2OQ9C0C9 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
UBE2OQ9C0C9 ATP8A2P3-201ENST00000426792 1536 ntBASIC7.64□□□□□ -1.19
UBE2OQ9C0C9 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
UBE2OQ9C0C9 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC7.64□□□□□ -1.19
UBE2OQ9C0C9 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
UBE2OQ9C0C9 LDHA-206ENST00000430553 1310 ntTSL 2 BASIC7.64□□□□□ -1.19
UBE2OQ9C0C9 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
UBE2OQ9C0C9 AC022819.1-201ENST00000563495 3910 ntBASIC7.64□□□□□ -1.19
UBE2OQ9C0C9 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
UBE2OQ9C0C9 RNU4-76P-201ENST00000364509 141 ntBASIC7.64□□□□□ -1.19
UBE2OQ9C0C9 RNA5SP485-201ENST00000365053 119 ntBASIC7.64□□□□□ -1.19
UBE2OQ9C0C9 RN7SKP69-201ENST00000365390 305 ntBASIC7.64□□□□□ -1.19
UBE2OQ9C0C9 CASP10-206ENST00000374650 1126 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
UBE2OQ9C0C9 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
UBE2OQ9C0C9 OR6C69P-201ENST00000394268 893 ntBASIC7.64□□□□□ -1.19
UBE2OQ9C0C9 LARP1P1-201ENST00000407692 292 ntBASIC7.64□□□□□ -1.19
UBE2OQ9C0C9 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC7.64□□□□□ -1.19
UBE2OQ9C0C9 VN1R20P-201ENST00000425215 966 ntBASIC7.64□□□□□ -1.19
UBE2OQ9C0C9 GAPDHP51-201ENST00000426454 1000 ntBASIC7.64□□□□□ -1.19
UBE2OQ9C0C9 CCNB1IP1P2-201ENST00000432876 818 ntBASIC7.64□□□□□ -1.19
UBE2OQ9C0C9 HMGB1P48-201ENST00000446155 598 ntBASIC7.64□□□□□ -1.19
UBE2OQ9C0C9 AL627224.1-201ENST00000448334 444 ntBASIC7.64□□□□□ -1.19
UBE2OQ9C0C9 MTND5P20-201ENST00000448677 143 ntBASIC7.64□□□□□ -1.19
UBE2OQ9C0C9 AC096922.1-201ENST00000461635 651 ntBASIC7.64□□□□□ -1.19
UBE2OQ9C0C9 RN7SL552P-201ENST00000462094 276 ntBASIC7.64□□□□□ -1.19
UBE2OQ9C0C9 AC093627.1-201ENST00000465755 877 ntTSL 3 BASIC7.64□□□□□ -1.19
UBE2OQ9C0C9 SEC62-AS1-201ENST00000479626 346 ntTSL 5 BASIC7.64□□□□□ -1.19
UBE2OQ9C0C9 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC7.64□□□□□ -1.19
UBE2OQ9C0C9 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC7.64□□□□□ -1.19
UBE2OQ9C0C9 Y_RNA.702-201ENST00000516843 96 ntBASIC7.64□□□□□ -1.19
UBE2OQ9C0C9 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC7.64□□□□□ -1.19
UBE2OQ9C0C9 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC7.64□□□□□ -1.19
UBE2OQ9C0C9 AC104383.1-201ENST00000530297 370 ntBASIC7.64□□□□□ -1.19
UBE2OQ9C0C9 OR4A21P-201ENST00000532759 944 ntBASIC7.64□□□□□ -1.19
UBE2OQ9C0C9 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC7.64□□□□□ -1.19
UBE2OQ9C0C9 AC122688.2-201ENST00000543922 585 ntTSL 3 BASIC7.64□□□□□ -1.19
UBE2OQ9C0C9 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
UBE2OQ9C0C9 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC7.64□□□□□ -1.19
UBE2OQ9C0C9 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC7.64□□□□□ -1.19
UBE2OQ9C0C9 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC7.64□□□□□ -1.19
UBE2OQ9C0C9 AC116553.2-201ENST00000564203 463 ntBASIC7.64□□□□□ -1.19
UBE2OQ9C0C9 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC7.64□□□□□ -1.19
UBE2OQ9C0C9 AC127024.5-201ENST00000580085 462 ntBASIC7.64□□□□□ -1.19
UBE2OQ9C0C9 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC7.64□□□□□ -1.19
UBE2OQ9C0C9 ABBA01006766.1-201ENST00000584728 294 ntBASIC7.64□□□□□ -1.19
UBE2OQ9C0C9 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC7.64□□□□□ -1.19
UBE2OQ9C0C9 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC7.64□□□□□ -1.19
UBE2OQ9C0C9 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC7.64□□□□□ -1.19
UBE2OQ9C0C9 AC012254.4-201ENST00000588843 273 ntBASIC7.64□□□□□ -1.19
UBE2OQ9C0C9 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC7.64□□□□□ -1.19
UBE2OQ9C0C9 AL391497.1-201ENST00000608671 547 ntBASIC7.64□□□□□ -1.19
UBE2OQ9C0C9 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC7.64□□□□□ -1.19
UBE2OQ9C0C9 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC7.64□□□□□ -1.19
UBE2OQ9C0C9 AC099654.14-201ENST00000638599 341 ntBASIC7.64□□□□□ -1.19
UBE2OQ9C0C9 SAMMSON-214ENST00000641395 1264 ntBASIC7.64□□□□□ -1.19
UBE2OQ9C0C9 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
UBE2OQ9C0C9 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
UBE2OQ9C0C9 ZNF585B-204ENST00000531805 2971 ntTSL 2 BASIC7.64□□□□□ -1.19
UBE2OQ9C0C9 NHEJ1-202ENST00000409720 1954 ntTSL 5 BASIC7.64□□□□□ -1.19
UBE2OQ9C0C9 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
UBE2OQ9C0C9 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
UBE2OQ9C0C9 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
UBE2OQ9C0C9 CAST-234ENST00000511049 3273 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
UBE2OQ9C0C9 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC7.63□□□□□ -1.19
UBE2OQ9C0C9 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC7.63□□□□□ -1.19
UBE2OQ9C0C9 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
UBE2OQ9C0C9 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
UBE2OQ9C0C9 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
UBE2OQ9C0C9 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
UBE2OQ9C0C9 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
UBE2OQ9C0C9 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
UBE2OQ9C0C9 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC7.63□□□□□ -1.19
UBE2OQ9C0C9 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
UBE2OQ9C0C9 AP003175.1-201ENST00000641383 6658 ntBASIC7.63□□□□□ -1.19
UBE2OQ9C0C9 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC7.63□□□□□ -1.19
UBE2OQ9C0C9 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
UBE2OQ9C0C9 OR56B2P-201ENST00000317102 954 ntBASIC7.63□□□□□ -1.19
UBE2OQ9C0C9 OR51L1-201ENST00000321543 948 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
UBE2OQ9C0C9 Y_RNA.61-201ENST00000362835 102 ntBASIC7.63□□□□□ -1.19
UBE2OQ9C0C9 XGY1-201ENST00000381172 446 ntBASIC7.63□□□□□ -1.19
UBE2OQ9C0C9 SNORA75-201ENST00000384158 137 ntBASIC7.63□□□□□ -1.19
UBE2OQ9C0C9 RNU6-1200P-201ENST00000384162 107 ntBASIC7.63□□□□□ -1.19
UBE2OQ9C0C9 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC7.63□□□□□ -1.19
UBE2OQ9C0C9 GCNT1P4-201ENST00000404096 329 ntBASIC7.63□□□□□ -1.19
UBE2OQ9C0C9 SNX10-203ENST00000409367 746 ntTSL 5 BASIC7.63□□□□□ -1.19
UBE2OQ9C0C9 RN7SKP254-201ENST00000410685 310 ntBASIC7.63□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms