Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 AC108463.1-201ENST00000450258 347 ntBASIC7.67□□□□□ -1.18
TRAIPQ9BWF2 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
TRAIPQ9BWF2 RPS27AP8-201ENST00000452665 445 ntBASIC7.67□□□□□ -1.18
TRAIPQ9BWF2 RN7SL492P-201ENST00000460700 295 ntBASIC7.67□□□□□ -1.18
TRAIPQ9BWF2 UOX-201ENST00000471089 899 ntBASIC7.67□□□□□ -1.18
TRAIPQ9BWF2 DSTNP2-201ENST00000504533 515 ntBASIC7.67□□□□□ -1.18
TRAIPQ9BWF2 NACAP5-201ENST00000509863 636 ntBASIC7.67□□□□□ -1.18
TRAIPQ9BWF2 AC097103.2-205ENST00000515247 567 ntTSL 4 BASIC7.67□□□□□ -1.18
TRAIPQ9BWF2 RNA5SP318-201ENST00000516352 92 ntBASIC7.67□□□□□ -1.18
TRAIPQ9BWF2 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC7.67□□□□□ -1.18
TRAIPQ9BWF2 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
TRAIPQ9BWF2 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
TRAIPQ9BWF2 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC7.67□□□□□ -1.18
TRAIPQ9BWF2 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC7.67□□□□□ -1.18
TRAIPQ9BWF2 AC091304.4-201ENST00000565703 620 ntBASIC7.67□□□□□ -1.18
TRAIPQ9BWF2 AC093519.1-201ENST00000566109 298 ntBASIC7.67□□□□□ -1.18
TRAIPQ9BWF2 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC7.67□□□□□ -1.18
TRAIPQ9BWF2 MIR4312-201ENST00000579909 76 ntBASIC7.67□□□□□ -1.18
TRAIPQ9BWF2 AC011447.2-201ENST00000592921 283 ntBASIC7.67□□□□□ -1.18
TRAIPQ9BWF2 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC7.67□□□□□ -1.18
TRAIPQ9BWF2 AC135507.1-201ENST00000607214 561 ntBASIC7.67□□□□□ -1.18
TRAIPQ9BWF2 AC008443.7-201ENST00000622195 246 ntBASIC7.67□□□□□ -1.18
TRAIPQ9BWF2 AC007494.3-201ENST00000624660 743 ntBASIC7.67□□□□□ -1.18
TRAIPQ9BWF2 AL049541.2-201ENST00000626377 555 ntBASIC7.67□□□□□ -1.18
TRAIPQ9BWF2 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
TRAIPQ9BWF2 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC7.67□□□□□ -1.18
TRAIPQ9BWF2 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC7.67□□□□□ -1.18
TRAIPQ9BWF2 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC7.67□□□□□ -1.18
TRAIPQ9BWF2 AC092079.1-201ENST00000558620 1985 ntBASIC7.67□□□□□ -1.18
TRAIPQ9BWF2 AC107982.1-201ENST00000507171 1300 ntBASIC7.67□□□□□ -1.18
TRAIPQ9BWF2 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
TRAIPQ9BWF2 KCNMB3P1-202ENST00000493696 3389 ntBASIC7.67□□□□□ -1.18
TRAIPQ9BWF2 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC7.67□□□□□ -1.18
TRAIPQ9BWF2 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
TRAIPQ9BWF2 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
TRAIPQ9BWF2 AL671511.1-201ENST00000425033 3458 ntTSL 2 BASIC7.67□□□□□ -1.18
TRAIPQ9BWF2 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
TRAIPQ9BWF2 AL365204.1-201ENST00000423440 1430 ntTSL 5 BASIC7.67□□□□□ -1.18
TRAIPQ9BWF2 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
TRAIPQ9BWF2 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC7.67□□□□□ -1.18
TRAIPQ9BWF2 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC7.67□□□□□ -1.18
TRAIPQ9BWF2 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
TRAIPQ9BWF2 AL358913.2-201ENST00000553881 1548 ntBASIC7.67□□□□□ -1.18
TRAIPQ9BWF2 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
TRAIPQ9BWF2 ZNF793-207ENST00000587986 3869 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
TRAIPQ9BWF2 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
TRAIPQ9BWF2 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
TRAIPQ9BWF2 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC7.66□□□□□ -1.18
TRAIPQ9BWF2 SEPT14-201ENST00000388975 3785 ntAPPRIS P1 TSL 2 BASIC7.66□□□□□ -1.18
TRAIPQ9BWF2 TEK-204ENST00000519097 3836 ntTSL 2 BASIC7.66□□□□□ -1.18
TRAIPQ9BWF2 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
TRAIPQ9BWF2 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
TRAIPQ9BWF2 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
TRAIPQ9BWF2 AC092821.2-201ENST00000545710 2042 ntBASIC7.66□□□□□ -1.18
TRAIPQ9BWF2 ENTPD5-207ENST00000557325 3096 ntTSL 2 BASIC7.66□□□□□ -1.18
TRAIPQ9BWF2 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC7.66□□□□□ -1.18
TRAIPQ9BWF2 POT1-AS1-204ENST00000449642 3238 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
TRAIPQ9BWF2 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC7.66□□□□□ -1.18
TRAIPQ9BWF2 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC7.66□□□□□ -1.18
TRAIPQ9BWF2 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
TRAIPQ9BWF2 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
TRAIPQ9BWF2 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
TRAIPQ9BWF2 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
TRAIPQ9BWF2 DMD-211ENST00000378707 7410 ntTSL 5 BASIC7.66□□□□□ -1.18
TRAIPQ9BWF2 FBXW7-201ENST00000263981 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC7.66□□□□□ -1.18
TRAIPQ9BWF2 RNU6-1017P-201ENST00000363613 106 ntBASIC7.66□□□□□ -1.18
TRAIPQ9BWF2 RNA5SP152-201ENST00000365184 110 ntBASIC7.66□□□□□ -1.18
TRAIPQ9BWF2 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC7.66□□□□□ -1.18
TRAIPQ9BWF2 Y_RNA.436-201ENST00000384097 102 ntBASIC7.66□□□□□ -1.18
TRAIPQ9BWF2 RNU6-1151P-201ENST00000384684 107 ntBASIC7.66□□□□□ -1.18
TRAIPQ9BWF2 AL139098.1-201ENST00000407291 389 ntBASIC7.66□□□□□ -1.18
TRAIPQ9BWF2 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC7.66□□□□□ -1.18
TRAIPQ9BWF2 KCND3-AS1-202ENST00000427471 583 ntTSL 3 BASIC7.66□□□□□ -1.18
TRAIPQ9BWF2 AL590399.4-201ENST00000436561 601 ntBASIC7.66□□□□□ -1.18
TRAIPQ9BWF2 MTCYBP39-201ENST00000437562 491 ntBASIC7.66□□□□□ -1.18
TRAIPQ9BWF2 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC7.66□□□□□ -1.18
TRAIPQ9BWF2 RPL7AP71-201ENST00000451120 739 ntBASIC7.66□□□□□ -1.18
TRAIPQ9BWF2 AC243772.1-201ENST00000451620 410 ntBASIC7.66□□□□□ -1.18
TRAIPQ9BWF2 NDUFA5P7-201ENST00000452914 242 ntBASIC7.66□□□□□ -1.18
TRAIPQ9BWF2 NPM1P9-201ENST00000453156 844 ntBASIC7.66□□□□□ -1.18
TRAIPQ9BWF2 AL096803.1-201ENST00000456921 1021 ntBASIC7.66□□□□□ -1.18
TRAIPQ9BWF2 AC084754.1-201ENST00000463466 464 ntBASIC7.66□□□□□ -1.18
TRAIPQ9BWF2 AP003385.3-201ENST00000472498 287 ntBASIC7.66□□□□□ -1.18
TRAIPQ9BWF2 RPL23AP8-201ENST00000479812 475 ntBASIC7.66□□□□□ -1.18
TRAIPQ9BWF2 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC7.66□□□□□ -1.18
TRAIPQ9BWF2 AC109481.1-201ENST00000509173 282 ntBASIC7.66□□□□□ -1.18
TRAIPQ9BWF2 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC7.66□□□□□ -1.18
TRAIPQ9BWF2 IGLVV-66-201ENST00000523818 341 ntBASIC7.66□□□□□ -1.18
TRAIPQ9BWF2 AP000859.1-201ENST00000525536 307 ntBASIC7.66□□□□□ -1.18
TRAIPQ9BWF2 AL121766.1-201ENST00000547436 487 ntBASIC7.66□□□□□ -1.18
TRAIPQ9BWF2 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC7.66□□□□□ -1.18
TRAIPQ9BWF2 AC010287.1-201ENST00000566916 357 ntBASIC7.66□□□□□ -1.18
TRAIPQ9BWF2 MYLK-221ENST00000583087 678 ntTSL 4 BASIC7.66□□□□□ -1.18
TRAIPQ9BWF2 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC7.66□□□□□ -1.18
TRAIPQ9BWF2 AC010487.1-201ENST00000594408 1172 ntBASIC7.66□□□□□ -1.18
TRAIPQ9BWF2 AC146944.4-201ENST00000602697 718 ntBASIC7.66□□□□□ -1.18
TRAIPQ9BWF2 AC006270.3-201ENST00000605967 1036 ntBASIC7.66□□□□□ -1.18
TRAIPQ9BWF2 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC7.66□□□□□ -1.18
TRAIPQ9BWF2 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC7.66□□□□□ -1.18
TRAIPQ9BWF2 AC099654.6-201ENST00000636487 512 ntBASIC7.66□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms