| MUC4 | Q99102 | SNORA70-201 | ENST00000384436 | 135 nt | BASIC | 4.1 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | SNORD56.6-201 | ENST00000384569 | 71 nt | BASIC | 4.1 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | MIR23A-201 | ENST00000385245 | 73 nt | BASIC | 4.1 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | AC096921.1-201 | ENST00000411661 | 375 nt | BASIC | 4.1 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | FO393401.1-203 | ENST00000416260 | 486 nt | TSL 5 BASIC | 4.1 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | NIFKP3-201 | ENST00000417799 | 865 nt | BASIC | 4.1 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | AC079790.1-201 | ENST00000420365 | 507 nt | TSL 3 BASIC | 4.1 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | AC138761.5-201 | ENST00000433967 | 325 nt | BASIC | 4.1 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | AL121759.1-201 | ENST00000434043 | 795 nt | TSL 5 BASIC | 4.1 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | AC003991.1-210 | ENST00000434733 | 1048 nt | TSL 3 BASIC | 4.1 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | ACA64.1-201 | ENST00000459171 | 127 nt | BASIC | 4.1 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | CBX1P5-201 | ENST00000475330 | 559 nt | BASIC | 4.1 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | AC093267.1-201 | ENST00000489176 | 961 nt | BASIC | 4.1 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | MYL6-213 | ENST00000549017 | 502 nt | TSL 3 BASIC | 4.1 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | AC004825.1-201 | ENST00000555068 | 586 nt | BASIC | 4.1 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | RPL12P48-201 | ENST00000605620 | 304 nt | BASIC | 4.1 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | AC007786.3-201 | ENST00000615154 | 596 nt | BASIC | 4.1 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | FP236241.1-206 | ENST00000625005 | 987 nt | TSL 5 BASIC | 4.1 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | AL592430.2-201 | ENST00000633779 | 486 nt | TSL 5 BASIC | 4.1 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | PDE4D-229 | ENST00000638939 | 375 nt | TSL 5 BASIC | 4.1 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | UPF2-201 | ENST00000356352 | 5569 nt | APPRIS P1 TSL 1 (best) BASIC | 4.1 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | AC106872.5-201 | ENST00000508856 | 1416 nt | BASIC | 4.1 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | STON1-202 | ENST00000406226 | 5614 nt | APPRIS P1 TSL 1 (best) BASIC | 4.1 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | ZNF480-204 | ENST00000490272 | 2238 nt | TSL 2 BASIC | 4.09 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | AP001284.1-201 | ENST00000528393 | 2118 nt | BASIC | 4.09 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | PEX2-201 | ENST00000357039 | 4317 nt | APPRIS P1 TSL 1 (best) BASIC | 4.09 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | YES1P1-201 | ENST00000418510 | 1628 nt | BASIC | 4.09 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | PSMA8-205 | ENST00000612461 | 1619 nt | TSL 5 BASIC | 4.09 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | AC007842.1-201 | ENST00000597336 | 2039 nt | BASIC | 4.09 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | TET1-201 | ENST00000373644 | 9288 nt | APPRIS P1 TSL 1 (best) BASIC | 4.09 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | CCDC62-205 | ENST00000537566 | 3537 nt | APPRIS ALT2 TSL 2 BASIC | 4.09 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | PHC3-214 | ENST00000494943 | 5030 nt | TSL 1 (best) BASIC | 4.09 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | NEAT1-202 | ENST00000501122 | 22743 nt | BASIC | 4.09 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | TAS2R8-201 | ENST00000240615 | 1243 nt | APPRIS P1 BASIC | 4.09 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | PIH1D2-201 | ENST00000280350 | 1241 nt | APPRIS P1 TSL 5 BASIC | 4.09 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | SELENOWP1-201 | ENST00000322792 | 252 nt | BASIC | 4.09 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | HIST1H3PS1-201 | ENST00000404612 | 417 nt | BASIC | 4.09 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | AC099654.1-202 | ENST00000415836 | 564 nt | TSL 4 BASIC | 4.09 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | AK4P4-201 | ENST00000419465 | 646 nt | BASIC | 4.09 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | AL451047.1-201 | ENST00000424451 | 814 nt | TSL 3 BASIC | 4.09 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | AC018832.1-201 | ENST00000428171 | 566 nt | TSL 4 BASIC | 4.09 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | NPM1P25-201 | ENST00000429734 | 854 nt | BASIC | 4.09 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | PIH1D2-202 | ENST00000431456 | 1245 nt | TSL 5 BASIC | 4.09 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | AL450996.1-201 | ENST00000445574 | 1202 nt | BASIC | 4.09 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | EEF1B2P6-201 | ENST00000445713 | 673 nt | BASIC | 4.09 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | IGBP1P3-201 | ENST00000447449 | 1000 nt | BASIC | 4.09 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | AC132807.1-201 | ENST00000449613 | 458 nt | TSL 3 BASIC | 4.09 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | CBX1P2-201 | ENST00000453841 | 458 nt | BASIC | 4.09 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | RN7SL570P-201 | ENST00000484405 | 292 nt | BASIC | 4.09 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | AC093001.1-201 | ENST00000489011 | 551 nt | TSL 4 BASIC | 4.09 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | AC025187.1-201 | ENST00000506305 | 686 nt | TSL 3 BASIC | 4.09 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | AC093305.1-201 | ENST00000514105 | 522 nt | TSL 5 BASIC | 4.09 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | AC111000.6-201 | ENST00000514471 | 709 nt | BASIC | 4.09 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | KLRK1-204 | ENST00000540818 | 951 nt | APPRIS P1 TSL 1 (best) BASIC | 4.09 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | HAUS8P1-201 | ENST00000549005 | 542 nt | BASIC | 4.09 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | AL157756.1-203 | ENST00000553269 | 600 nt | TSL 3 BASIC | 4.09 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | NPM1P5-201 | ENST00000557228 | 838 nt | BASIC | 4.09 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | AC044860.2-201 | ENST00000561005 | 179 nt | BASIC | 4.09 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | AC055874.1-201 | ENST00000561458 | 479 nt | TSL 2 BASIC | 4.09 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | ELSPBP1-205 | ENST00000597519 | 557 nt | TSL 3 BASIC | 4.09 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | AL109954.2-201 | ENST00000611020 | 530 nt | TSL 4 BASIC | 4.09 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | Mico1.1-201 | ENST00000611698 | 204 nt | BASIC | 4.09 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | AC245100.4-204 | ENST00000635587 | 1555 nt | TSL 5 BASIC | 4.09 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | MRE11P1-201 | ENST00000464884 | 2127 nt | BASIC | 4.09 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | SMARCE1-208 | ENST00000474246 | 2124 nt | TSL 1 (best) BASIC | 4.09 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | BTLA-201 | ENST00000334529 | 3213 nt | APPRIS P3 TSL 1 (best) BASIC | 4.09 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | C4BPAP1-201 | ENST00000415474 | 1893 nt | BASIC | 4.09 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | ARHGAP20-204 | ENST00000528829 | 5880 nt | APPRIS ALT2 TSL 1 (best) BASIC | 4.09 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | AC011287.1-206 | ENST00000638774 | 2642 nt | TSL 5 BASIC | 4.09 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | SLITRK4-202 | ENST00000356928 | 3074 nt | APPRIS P1 TSL 2 BASIC | 4.09 | □□□□□ -1.75 | | |
| MUC4 | Q99102 | AC003973.3-201 | ENST00000624863 | 2822 nt | BASIC | 4.09 | □□□□□ -1.76 | | |
| MUC4 | Q99102 | AP000473.2-201 | ENST00000602659 | 1537 nt | BASIC | 4.09 | □□□□□ -1.76 | | |
| MUC4 | Q99102 | MUC17-201 | ENST00000306151 | 14247 nt | APPRIS P1 TSL 1 (best) BASIC | 4.09 | □□□□□ -1.76 | | |
| MUC4 | Q99102 | OR7E101P-201 | ENST00000400428 | 513 nt | BASIC | 4.09 | □□□□□ -1.76 | | |
| MUC4 | Q99102 | LSM5-203 | ENST00000409782 | 649 nt | TSL 5 BASIC | 4.09 | □□□□□ -1.76 | | |
| MUC4 | Q99102 | GPS2P1-201 | ENST00000411761 | 986 nt | BASIC | 4.09 | □□□□□ -1.76 | | |
| MUC4 | Q99102 | RPS27AP6-201 | ENST00000427962 | 448 nt | BASIC | 4.09 | □□□□□ -1.76 | | |
| MUC4 | Q99102 | AC012368.1-201 | ENST00000438115 | 552 nt | TSL 3 BASIC | 4.09 | □□□□□ -1.76 | | |
| MUC4 | Q99102 | AC087501.1-201 | ENST00000445617 | 715 nt | TSL 5 BASIC | 4.09 | □□□□□ -1.76 | | |
| MUC4 | Q99102 | AL512328.1-202 | ENST00000452640 | 850 nt | TSL 3 BASIC | 4.09 | □□□□□ -1.76 | | |
| MUC4 | Q99102 | TAAR4P-201 | ENST00000454843 | 1039 nt | BASIC | 4.09 | □□□□□ -1.76 | | |
| MUC4 | Q99102 | RN7SL197P-201 | ENST00000466981 | 299 nt | BASIC | 4.09 | □□□□□ -1.76 | | |
| MUC4 | Q99102 | AL133372.2-203 | ENST00000508469 | 922 nt | TSL 1 (best) BASIC | 4.09 | □□□□□ -1.76 | | |
| MUC4 | Q99102 | ADGRL3-218 | ENST00000514996 | 4731 nt | APPRIS ALT2 TSL 5 BASIC | 4.09 | □□□□□ -1.76 | | |
| MUC4 | Q99102 | ST3GAL3-233 | ENST00000531816 | 344 nt | TSL 1 (best) BASIC | 4.09 | □□□□□ -1.76 | | |
| MUC4 | Q99102 | PCNAP4-201 | ENST00000532690 | 730 nt | BASIC | 4.09 | □□□□□ -1.76 | | |
| MUC4 | Q99102 | AC009117.3-202 | ENST00000563825 | 557 nt | TSL 4 BASIC | 4.09 | □□□□□ -1.76 | | |
| MUC4 | Q99102 | AC136944.1-201 | ENST00000567464 | 560 nt | TSL 5 BASIC | 4.09 | □□□□□ -1.76 | | |
| MUC4 | Q99102 | LINC01198-207 | ENST00000598084 | 881 nt | TSL 5 BASIC | 4.09 | □□□□□ -1.76 | | |
| MUC4 | Q99102 | DTNA-232 | ENST00000599844 | 853 nt | TSL 1 (best) BASIC | 4.09 | □□□□□ -1.76 | | |
| MUC4 | Q99102 | AC063977.5-201 | ENST00000601044 | 974 nt | BASIC | 4.09 | □□□□□ -1.76 | | |
| MUC4 | Q99102 | AF230666.2-201 | ENST00000602328 | 725 nt | BASIC | 4.09 | □□□□□ -1.76 | | |
| MUC4 | Q99102 | AL050403.2-203 | ENST00000603180 | 558 nt | TSL 4 BASIC | 4.09 | □□□□□ -1.76 | | |
| MUC4 | Q99102 | AL589674.2-201 | ENST00000604304 | 337 nt | BASIC | 4.09 | □□□□□ -1.76 | | |
| MUC4 | Q99102 | AC026786.2-201 | ENST00000606110 | 392 nt | TSL 3 BASIC | 4.09 | □□□□□ -1.76 | | |
| MUC4 | Q99102 | AL049539.1-201 | ENST00000611964 | 459 nt | BASIC | 4.09 | □□□□□ -1.76 | | |
| MUC4 | Q99102 | IBTK-206 | ENST00000503631 | 3560 nt | TSL 1 (best) BASIC | 4.09 | □□□□□ -1.76 | | |
| MUC4 | Q99102 | ATP5A1P1-201 | ENST00000454088 | 1321 nt | BASIC | 4.08 | □□□□□ -1.76 | | |
| MUC4 | Q99102 | DST-220 | ENST00000518935 | 3547 nt | TSL 1 (best) BASIC | 4.08 | □□□□□ -1.76 | | |
| MUC4 | Q99102 | SEC31A-226 | ENST00000508479 | 3397 nt | TSL 2 BASIC | 4.08 | □□□□□ -1.76 | | |