Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 MTND6P20-201ENST00000522986 418 ntBASIC7.27□□□□□ -1.25
DEPDC4Q8N2C3 FAM92A1P1-201ENST00000528023 890 ntBASIC7.27□□□□□ -1.25
DEPDC4Q8N2C3 PSMA6-202ENST00000540871 912 ntTSL 2 BASIC7.27□□□□□ -1.25
DEPDC4Q8N2C3 RPL21P5-201ENST00000554662 472 ntBASIC7.27□□□□□ -1.25
DEPDC4Q8N2C3 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC7.27□□□□□ -1.25
DEPDC4Q8N2C3 UBE2Q2P11-201ENST00000559691 205 ntBASIC7.27□□□□□ -1.25
DEPDC4Q8N2C3 BLID-201ENST00000560104 862 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
DEPDC4Q8N2C3 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC7.27□□□□□ -1.25
DEPDC4Q8N2C3 ARL17A-205ENST00000573185 581 ntAPPRIS ALT2 TSL 3 BASIC7.27□□□□□ -1.25
DEPDC4Q8N2C3 ARL17B-206ENST00000575698 581 ntTSL 3 BASIC7.27□□□□□ -1.25
DEPDC4Q8N2C3 AC069061.2-201ENST00000580686 480 ntTSL 3 BASIC7.27□□□□□ -1.25
DEPDC4Q8N2C3 AC138761.2-201ENST00000583878 343 ntBASIC7.27□□□□□ -1.25
DEPDC4Q8N2C3 CD209-208ENST00000593821 807 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
DEPDC4Q8N2C3 AL121917.2-201ENST00000605044 390 ntBASIC7.27□□□□□ -1.25
DEPDC4Q8N2C3 Metazoa_SRP.46-201ENST00000611137 251 ntBASIC7.27□□□□□ -1.25
DEPDC4Q8N2C3 ELMO2P1-202ENST00000614283 794 ntBASIC7.27□□□□□ -1.25
DEPDC4Q8N2C3 AC021106.3-201ENST00000623925 531 ntBASIC7.27□□□□□ -1.25
DEPDC4Q8N2C3 WASF5P-205ENST00000428639 1455 ntBASIC7.27□□□□□ -1.25
DEPDC4Q8N2C3 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
DEPDC4Q8N2C3 LGI1-211ENST00000630047 1751 ntTSL 2 BASIC7.27□□□□□ -1.25
DEPDC4Q8N2C3 TRIM5-202ENST00000380034 2991 ntAPPRIS P1 TSL 2 BASIC7.27□□□□□ -1.25
DEPDC4Q8N2C3 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
DEPDC4Q8N2C3 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
DEPDC4Q8N2C3 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
DEPDC4Q8N2C3 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
DEPDC4Q8N2C3 PSG5-201ENST00000342951 1626 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
DEPDC4Q8N2C3 BX284613.1-201ENST00000452221 1641 ntBASIC7.27□□□□□ -1.25
DEPDC4Q8N2C3 MFSD8-217ENST00000641178 4374 ntBASIC7.27□□□□□ -1.25
DEPDC4Q8N2C3 CYP3A43-202ENST00000312017 1349 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
DEPDC4Q8N2C3 PCDH18-205ENST00000511115 1331 ntTSL 2 BASIC7.27□□□□□ -1.25
DEPDC4Q8N2C3 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
DEPDC4Q8N2C3 CPB2-AS1-204ENST00000606991 3218 ntTSL 2 BASIC7.26□□□□□ -1.25
DEPDC4Q8N2C3 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
DEPDC4Q8N2C3 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
DEPDC4Q8N2C3 BCL2L14-204ENST00000396367 1886 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
DEPDC4Q8N2C3 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
DEPDC4Q8N2C3 FAR2P1-201ENST00000325390 3679 ntTSL 5 BASIC7.26□□□□□ -1.25
DEPDC4Q8N2C3 FAM71F1-207ENST00000485070 1574 ntTSL 2 BASIC7.26□□□□□ -1.25
DEPDC4Q8N2C3 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC7.26□□□□□ -1.25
DEPDC4Q8N2C3 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC7.26□□□□□ -1.25
DEPDC4Q8N2C3 HSD17B4-212ENST00000509514 2314 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
DEPDC4Q8N2C3 AC079097.1-201ENST00000512187 1399 ntBASIC7.26□□□□□ -1.25
DEPDC4Q8N2C3 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC7.26□□□□□ -1.25
DEPDC4Q8N2C3 AC138915.3-201ENST00000562908 1389 ntBASIC7.26□□□□□ -1.25
DEPDC4Q8N2C3 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
DEPDC4Q8N2C3 AL590065.1-201ENST00000603371 4774 ntBASIC7.26□□□□□ -1.25
DEPDC4Q8N2C3 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
DEPDC4Q8N2C3 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
DEPDC4Q8N2C3 FCAR-201ENST00000345937 608 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
DEPDC4Q8N2C3 LY6G6D-223ENST00000375825 402 ntAPPRIS P2 TSL 1 (best) BASIC7.26□□□□□ -1.25
DEPDC4Q8N2C3 IGKV6D-41-201ENST00000390271 371 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
DEPDC4Q8N2C3 TRAJ24-201ENST00000390513 63 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
DEPDC4Q8N2C3 AAMDC-202ENST00000393427 531 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
DEPDC4Q8N2C3 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
DEPDC4Q8N2C3 U3.34-201ENST00000408198 212 ntBASIC7.26□□□□□ -1.25
DEPDC4Q8N2C3 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC7.26□□□□□ -1.25
DEPDC4Q8N2C3 PIGFP2-201ENST00000421400 651 ntBASIC7.26□□□□□ -1.25
DEPDC4Q8N2C3 AL353052.1-201ENST00000428673 818 ntTSL 3 BASIC7.26□□□□□ -1.25
DEPDC4Q8N2C3 AC007683.1-201ENST00000432746 591 ntBASIC7.26□□□□□ -1.25
DEPDC4Q8N2C3 LINC01829-202ENST00000433133 2100 ntTSL 2 BASIC7.26□□□□□ -1.25
DEPDC4Q8N2C3 AC104850.1-201ENST00000435940 476 ntBASIC7.26□□□□□ -1.25
DEPDC4Q8N2C3 AL023584.1-201ENST00000437067 349 ntTSL 3 BASIC7.26□□□□□ -1.25
DEPDC4Q8N2C3 HIPK1-AS1-203ENST00000441071 571 ntTSL 3 BASIC7.26□□□□□ -1.25
DEPDC4Q8N2C3 DDX3X-202ENST00000441189 1051 ntTSL 2 BASIC7.26□□□□□ -1.25
DEPDC4Q8N2C3 CALM1P1-201ENST00000442082 433 ntBASIC7.26□□□□□ -1.25
DEPDC4Q8N2C3 AC093019.1-201ENST00000443135 252 ntBASIC7.26□□□□□ -1.25
DEPDC4Q8N2C3 AL157400.2-201ENST00000454174 563 ntTSL 2 BASIC7.26□□□□□ -1.25
DEPDC4Q8N2C3 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC7.26□□□□□ -1.25
DEPDC4Q8N2C3 RN7SL856P-201ENST00000461754 298 ntBASIC7.26□□□□□ -1.25
DEPDC4Q8N2C3 RN7SL862P-201ENST00000491550 298 ntBASIC7.26□□□□□ -1.25
DEPDC4Q8N2C3 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC7.26□□□□□ -1.25
DEPDC4Q8N2C3 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC7.26□□□□□ -1.25
DEPDC4Q8N2C3 Y_RNA.693-201ENST00000516641 110 ntBASIC7.26□□□□□ -1.25
DEPDC4Q8N2C3 AC103681.2-201ENST00000527450 567 ntTSL 4 BASIC7.26□□□□□ -1.25
DEPDC4Q8N2C3 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC7.26□□□□□ -1.25
DEPDC4Q8N2C3 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC7.26□□□□□ -1.25
DEPDC4Q8N2C3 CBX3P5-201ENST00000552017 521 ntBASIC7.26□□□□□ -1.25
DEPDC4Q8N2C3 OTX2-204ENST00000554788 835 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
DEPDC4Q8N2C3 AC087565.1-201ENST00000565061 391 ntTSL 5 BASIC7.26□□□□□ -1.25
DEPDC4Q8N2C3 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC7.26□□□□□ -1.25
DEPDC4Q8N2C3 AC092142.1-202ENST00000567021 829 ntTSL 5 BASIC7.26□□□□□ -1.25
DEPDC4Q8N2C3 AC025678.1-201ENST00000567861 338 ntBASIC7.26□□□□□ -1.25
DEPDC4Q8N2C3 AC091180.5-201ENST00000576461 382 ntTSL 5 BASIC7.26□□□□□ -1.25
DEPDC4Q8N2C3 RN7SL366P-201ENST00000577957 292 ntBASIC7.26□□□□□ -1.25
DEPDC4Q8N2C3 AC090236.2-201ENST00000587933 1101 ntBASIC7.26□□□□□ -1.25
DEPDC4Q8N2C3 AL356052.1-201ENST00000605764 376 ntBASIC7.26□□□□□ -1.25
DEPDC4Q8N2C3 RNF219-AS1-213ENST00000607860 577 ntTSL 4 BASIC7.26□□□□□ -1.25
DEPDC4Q8N2C3 AL121830.1-206ENST00000608476 1254 ntTSL 5 BASIC7.26□□□□□ -1.25
DEPDC4Q8N2C3 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
DEPDC4Q8N2C3 AC099811.5-201ENST00000617211 819 ntTSL 5 BASIC7.26□□□□□ -1.25
DEPDC4Q8N2C3 FOPNL-206ENST00000573968 2039 ntTSL 2 BASIC7.26□□□□□ -1.25
DEPDC4Q8N2C3 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
DEPDC4Q8N2C3 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
DEPDC4Q8N2C3 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
DEPDC4Q8N2C3 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
DEPDC4Q8N2C3 HIPK1-211ENST00000626993 8016 ntTSL 5 BASIC7.26□□□□□ -1.25
DEPDC4Q8N2C3 MXI1-203ENST00000361248 2188 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
DEPDC4Q8N2C3 SPATA31B1P-201ENST00000434692 4016 ntBASIC7.26□□□□□ -1.25
DEPDC4Q8N2C3 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
DEPDC4Q8N2C3 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC7.26□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms