Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 AC010487.1-201ENST00000594408 1172 ntBASIC5.19□□□□□ -1.58
H3F3CQ6NXT2 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.19□□□□□ -1.58
H3F3CQ6NXT2 AL513327.3-201ENST00000602618 469 ntBASIC5.19□□□□□ -1.58
H3F3CQ6NXT2 IMMP1LP3-201ENST00000604197 224 ntBASIC5.19□□□□□ -1.58
H3F3CQ6NXT2 AC025574.2-201ENST00000615621 514 ntBASIC5.19□□□□□ -1.58
H3F3CQ6NXT2 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.19□□□□□ -1.58
H3F3CQ6NXT2 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.19□□□□□ -1.58
H3F3CQ6NXT2 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.19□□□□□ -1.58
H3F3CQ6NXT2 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
H3F3CQ6NXT2 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
H3F3CQ6NXT2 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
H3F3CQ6NXT2 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.19□□□□□ -1.58
H3F3CQ6NXT2 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
H3F3CQ6NXT2 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
H3F3CQ6NXT2 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.19□□□□□ -1.58
H3F3CQ6NXT2 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
H3F3CQ6NXT2 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.19□□□□□ -1.58
H3F3CQ6NXT2 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
H3F3CQ6NXT2 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
H3F3CQ6NXT2 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
H3F3CQ6NXT2 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
H3F3CQ6NXT2 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
H3F3CQ6NXT2 AL022311.1-201ENST00000623726 19416 ntBASIC5.18□□□□□ -1.58
H3F3CQ6NXT2 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
H3F3CQ6NXT2 RNA5SP319-201ENST00000362768 119 ntBASIC5.18□□□□□ -1.58
H3F3CQ6NXT2 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.18□□□□□ -1.58
H3F3CQ6NXT2 MIR1178-201ENST00000408396 91 ntBASIC5.18□□□□□ -1.58
H3F3CQ6NXT2 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.18□□□□□ -1.58
H3F3CQ6NXT2 GABARAPL3-201ENST00000412799 354 ntBASIC5.18□□□□□ -1.58
H3F3CQ6NXT2 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.18□□□□□ -1.58
H3F3CQ6NXT2 RNGTTP1-201ENST00000420965 728 ntBASIC5.18□□□□□ -1.58
H3F3CQ6NXT2 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
H3F3CQ6NXT2 SEPT7P3-201ENST00000455017 621 ntBASIC5.18□□□□□ -1.58
H3F3CQ6NXT2 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC5.18□□□□□ -1.58
H3F3CQ6NXT2 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.18□□□□□ -1.58
H3F3CQ6NXT2 RPS7P6-201ENST00000485777 579 ntBASIC5.18□□□□□ -1.58
H3F3CQ6NXT2 AC008638.1-201ENST00000506035 866 ntBASIC5.18□□□□□ -1.58
H3F3CQ6NXT2 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.18□□□□□ -1.58
H3F3CQ6NXT2 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
H3F3CQ6NXT2 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.18□□□□□ -1.58
H3F3CQ6NXT2 AC139697.1-201ENST00000548429 745 ntBASIC5.18□□□□□ -1.58
H3F3CQ6NXT2 AC010547.7-201ENST00000570323 333 ntBASIC5.18□□□□□ -1.58
H3F3CQ6NXT2 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.18□□□□□ -1.58
H3F3CQ6NXT2 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.18□□□□□ -1.58
H3F3CQ6NXT2 SUGT1P3-202ENST00000604259 383 ntBASIC5.18□□□□□ -1.58
H3F3CQ6NXT2 HIRAP1-201ENST00000605318 787 ntBASIC5.18□□□□□ -1.58
H3F3CQ6NXT2 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.18□□□□□ -1.58
H3F3CQ6NXT2 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
H3F3CQ6NXT2 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC5.18□□□□□ -1.58
H3F3CQ6NXT2 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.18□□□□□ -1.58
H3F3CQ6NXT2 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.18□□□□□ -1.58
H3F3CQ6NXT2 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
H3F3CQ6NXT2 AC093909.5-201ENST00000621839 1799 ntBASIC5.18□□□□□ -1.58
H3F3CQ6NXT2 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
H3F3CQ6NXT2 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.18□□□□□ -1.58
H3F3CQ6NXT2 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
H3F3CQ6NXT2 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
H3F3CQ6NXT2 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.18□□□□□ -1.58
H3F3CQ6NXT2 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
H3F3CQ6NXT2 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
H3F3CQ6NXT2 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.17□□□□□ -1.58
H3F3CQ6NXT2 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.17□□□□□ -1.58
H3F3CQ6NXT2 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
H3F3CQ6NXT2 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
H3F3CQ6NXT2 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
H3F3CQ6NXT2 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.17□□□□□ -1.58
H3F3CQ6NXT2 AC092111.2-201ENST00000611627 1414 ntBASIC5.17□□□□□ -1.58
H3F3CQ6NXT2 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
H3F3CQ6NXT2 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.17□□□□□ -1.58
H3F3CQ6NXT2 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
H3F3CQ6NXT2 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
H3F3CQ6NXT2 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
H3F3CQ6NXT2 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
H3F3CQ6NXT2 GAPDHP24-201ENST00000328713 983 ntBASIC5.17□□□□□ -1.58
H3F3CQ6NXT2 RNA5SP183-201ENST00000362452 119 ntBASIC5.17□□□□□ -1.58
H3F3CQ6NXT2 RN7SKP6-201ENST00000364795 319 ntBASIC5.17□□□□□ -1.58
H3F3CQ6NXT2 MIR551A-201ENST00000385042 96 ntBASIC5.17□□□□□ -1.58
H3F3CQ6NXT2 RPL11P3-201ENST00000395256 523 ntBASIC5.17□□□□□ -1.58
H3F3CQ6NXT2 AC007068.1-201ENST00000396690 844 ntBASIC5.17□□□□□ -1.58
H3F3CQ6NXT2 AC009804.1-201ENST00000400949 179 ntBASIC5.17□□□□□ -1.58
H3F3CQ6NXT2 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC5.17□□□□□ -1.58
H3F3CQ6NXT2 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.17□□□□□ -1.58
H3F3CQ6NXT2 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.17□□□□□ -1.58
H3F3CQ6NXT2 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.17□□□□□ -1.58
H3F3CQ6NXT2 AL596266.1-201ENST00000448132 400 ntBASIC5.17□□□□□ -1.58
H3F3CQ6NXT2 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
H3F3CQ6NXT2 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC5.17□□□□□ -1.58
H3F3CQ6NXT2 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.17□□□□□ -1.58
H3F3CQ6NXT2 COPS8P2-201ENST00000473228 627 ntBASIC5.17□□□□□ -1.58
H3F3CQ6NXT2 PDCL3P4-201ENST00000489621 720 ntBASIC5.17□□□□□ -1.58
H3F3CQ6NXT2 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.17□□□□□ -1.58
H3F3CQ6NXT2 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC5.17□□□□□ -1.58
H3F3CQ6NXT2 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.17□□□□□ -1.58
H3F3CQ6NXT2 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.17□□□□□ -1.58
H3F3CQ6NXT2 DHFRP1-201ENST00000579682 559 ntBASIC5.17□□□□□ -1.58
H3F3CQ6NXT2 AC007448.1-201ENST00000582714 234 ntBASIC5.17□□□□□ -1.58
H3F3CQ6NXT2 NPM1P45-201ENST00000583151 559 ntBASIC5.17□□□□□ -1.58
H3F3CQ6NXT2 OR7E18P-201ENST00000592589 702 ntBASIC5.17□□□□□ -1.58
H3F3CQ6NXT2 AC010503.3-201ENST00000594355 540 ntBASIC5.17□□□□□ -1.58
H3F3CQ6NXT2 FKBP1AP1-201ENST00000594588 318 ntBASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms