Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 RPS17P17-201ENST00000419392 409 ntBASIC7.21□□□□□ -1.26
CCDC144BQ3MJ40 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC7.21□□□□□ -1.26
CCDC144BQ3MJ40 IGLV3-4-201ENST00000432300 244 ntBASIC7.21□□□□□ -1.26
CCDC144BQ3MJ40 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC7.21□□□□□ -1.26
CCDC144BQ3MJ40 ELOCP11-201ENST00000436690 332 ntBASIC7.21□□□□□ -1.26
CCDC144BQ3MJ40 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC7.21□□□□□ -1.26
CCDC144BQ3MJ40 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC7.21□□□□□ -1.26
CCDC144BQ3MJ40 HSFY3P-201ENST00000444242 1191 ntBASIC7.21□□□□□ -1.26
CCDC144BQ3MJ40 ELOCP16-201ENST00000444494 332 ntBASIC7.21□□□□□ -1.26
CCDC144BQ3MJ40 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC7.21□□□□□ -1.26
CCDC144BQ3MJ40 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
CCDC144BQ3MJ40 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC7.21□□□□□ -1.26
CCDC144BQ3MJ40 AL133351.3-201ENST00000454998 193 ntBASIC7.21□□□□□ -1.26
CCDC144BQ3MJ40 AC023194.2-201ENST00000465398 406 ntBASIC7.21□□□□□ -1.26
CCDC144BQ3MJ40 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC7.21□□□□□ -1.26
CCDC144BQ3MJ40 RPS4XP6-201ENST00000477670 797 ntBASIC7.21□□□□□ -1.26
CCDC144BQ3MJ40 AC025458.1-201ENST00000506046 166 ntBASIC7.21□□□□□ -1.26
CCDC144BQ3MJ40 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
CCDC144BQ3MJ40 OR4D12P-201ENST00000509361 911 ntBASIC7.21□□□□□ -1.26
CCDC144BQ3MJ40 AC011411.1-201ENST00000509592 876 ntBASIC7.21□□□□□ -1.26
CCDC144BQ3MJ40 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC7.21□□□□□ -1.26
CCDC144BQ3MJ40 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC7.21□□□□□ -1.26
CCDC144BQ3MJ40 AP001207.2-201ENST00000519490 539 ntBASIC7.21□□□□□ -1.26
CCDC144BQ3MJ40 HMGB1P1-201ENST00000522557 636 ntBASIC7.21□□□□□ -1.26
CCDC144BQ3MJ40 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC7.21□□□□□ -1.26
CCDC144BQ3MJ40 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
CCDC144BQ3MJ40 AC092332.1-201ENST00000563684 829 ntBASIC7.21□□□□□ -1.26
CCDC144BQ3MJ40 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC7.21□□□□□ -1.26
CCDC144BQ3MJ40 AC007346.1-201ENST00000569208 867 ntBASIC7.21□□□□□ -1.26
CCDC144BQ3MJ40 LINC00556-201ENST00000569603 412 ntBASIC7.21□□□□□ -1.26
CCDC144BQ3MJ40 AC012146.2-201ENST00000576545 416 ntBASIC7.21□□□□□ -1.26
CCDC144BQ3MJ40 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC7.21□□□□□ -1.26
CCDC144BQ3MJ40 AC024589.2-201ENST00000605642 1294 ntBASIC7.21□□□□□ -1.26
CCDC144BQ3MJ40 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC7.21□□□□□ -1.26
CCDC144BQ3MJ40 AC073569.3-201ENST00000619055 682 ntBASIC7.21□□□□□ -1.26
CCDC144BQ3MJ40 AC008115.4-201ENST00000619780 775 ntBASIC7.21□□□□□ -1.26
CCDC144BQ3MJ40 MRPL57P1-201ENST00000621486 265 ntBASIC7.21□□□□□ -1.26
CCDC144BQ3MJ40 AC011815.3-201ENST00000624194 473 ntBASIC7.21□□□□□ -1.26
CCDC144BQ3MJ40 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC7.21□□□□□ -1.26
CCDC144BQ3MJ40 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
CCDC144BQ3MJ40 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
CCDC144BQ3MJ40 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC7.21□□□□□ -1.26
CCDC144BQ3MJ40 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
CCDC144BQ3MJ40 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.26
CCDC144BQ3MJ40 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
CCDC144BQ3MJ40 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
CCDC144BQ3MJ40 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
CCDC144BQ3MJ40 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.26
CCDC144BQ3MJ40 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC7.21□□□□□ -1.26
CCDC144BQ3MJ40 MTCO1P15-201ENST00000529569 1526 ntBASIC7.21□□□□□ -1.26
CCDC144BQ3MJ40 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
CCDC144BQ3MJ40 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC7.21□□□□□ -1.26
CCDC144BQ3MJ40 OFD1P15Y-201ENST00000411536 1392 ntBASIC7.2□□□□□ -1.26
CCDC144BQ3MJ40 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
CCDC144BQ3MJ40 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CCDC144BQ3MJ40 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CCDC144BQ3MJ40 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC7.2□□□□□ -1.26
CCDC144BQ3MJ40 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
CCDC144BQ3MJ40 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC7.2□□□□□ -1.26
CCDC144BQ3MJ40 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC7.2□□□□□ -1.26
CCDC144BQ3MJ40 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC7.2□□□□□ -1.26
CCDC144BQ3MJ40 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
CCDC144BQ3MJ40 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC7.2□□□□□ -1.26
CCDC144BQ3MJ40 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
CCDC144BQ3MJ40 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CCDC144BQ3MJ40 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
CCDC144BQ3MJ40 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC7.2□□□□□ -1.26
CCDC144BQ3MJ40 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CCDC144BQ3MJ40 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC7.2□□□□□ -1.26
CCDC144BQ3MJ40 PPCS-201ENST00000372556 984 ntTSL 2 BASIC7.2□□□□□ -1.26
CCDC144BQ3MJ40 RPL23AP59-201ENST00000399415 461 ntBASIC7.2□□□□□ -1.26
CCDC144BQ3MJ40 DNAJC19P6-201ENST00000401853 280 ntBASIC7.2□□□□□ -1.26
CCDC144BQ3MJ40 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC7.2□□□□□ -1.26
CCDC144BQ3MJ40 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC7.2□□□□□ -1.26
CCDC144BQ3MJ40 RPS3P2-201ENST00000421346 701 ntBASIC7.2□□□□□ -1.26
CCDC144BQ3MJ40 HMGB3P5-201ENST00000428894 612 ntBASIC7.2□□□□□ -1.26
CCDC144BQ3MJ40 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC7.2□□□□□ -1.26
CCDC144BQ3MJ40 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC7.2□□□□□ -1.26
CCDC144BQ3MJ40 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC7.2□□□□□ -1.26
CCDC144BQ3MJ40 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC7.2□□□□□ -1.26
CCDC144BQ3MJ40 SEPT14P24-201ENST00000447236 180 ntBASIC7.2□□□□□ -1.26
CCDC144BQ3MJ40 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC7.2□□□□□ -1.26
CCDC144BQ3MJ40 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC7.2□□□□□ -1.26
CCDC144BQ3MJ40 AL451063.1-201ENST00000450164 1133 ntBASIC7.2□□□□□ -1.26
CCDC144BQ3MJ40 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC7.2□□□□□ -1.26
CCDC144BQ3MJ40 PPIAP7-201ENST00000454070 489 ntBASIC7.2□□□□□ -1.26
CCDC144BQ3MJ40 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC7.2□□□□□ -1.26
CCDC144BQ3MJ40 AC006499.4-201ENST00000510947 694 ntBASIC7.2□□□□□ -1.26
CCDC144BQ3MJ40 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC7.2□□□□□ -1.26
CCDC144BQ3MJ40 AP000620.1-201ENST00000527147 504 ntBASIC7.2□□□□□ -1.26
CCDC144BQ3MJ40 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC7.2□□□□□ -1.26
CCDC144BQ3MJ40 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC7.2□□□□□ -1.26
CCDC144BQ3MJ40 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC7.2□□□□□ -1.26
CCDC144BQ3MJ40 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC7.2□□□□□ -1.26
CCDC144BQ3MJ40 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC7.2□□□□□ -1.26
CCDC144BQ3MJ40 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC7.2□□□□□ -1.26
CCDC144BQ3MJ40 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC7.2□□□□□ -1.26
CCDC144BQ3MJ40 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC7.2□□□□□ -1.26
CCDC144BQ3MJ40 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC7.2□□□□□ -1.26
CCDC144BQ3MJ40 AC092681.3-201ENST00000609463 678 ntBASIC7.2□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms