Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.53□□□□□ -1.52
CDK3Q00526 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC5.53□□□□□ -1.52
CDK3Q00526 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CDK3Q00526 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
CDK3Q00526 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CDK3Q00526 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.53□□□□□ -1.52
CDK3Q00526 MIR365B-201ENST00000362317 111 ntBASIC5.53□□□□□ -1.52
CDK3Q00526 RNA5SP234-201ENST00000363916 119 ntBASIC5.53□□□□□ -1.52
CDK3Q00526 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
CDK3Q00526 RNU1-136P-201ENST00000384181 164 ntBASIC5.53□□□□□ -1.52
CDK3Q00526 GABARAPL3-201ENST00000412799 354 ntBASIC5.53□□□□□ -1.52
CDK3Q00526 AL512504.1-201ENST00000415494 778 ntBASIC5.53□□□□□ -1.52
CDK3Q00526 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.53□□□□□ -1.52
CDK3Q00526 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CDK3Q00526 TMEM183AP1-205ENST00000432739 290 ntBASIC5.53□□□□□ -1.52
CDK3Q00526 OR6D1P-201ENST00000436165 939 ntBASIC5.53□□□□□ -1.52
CDK3Q00526 RANP1-206ENST00000455094 651 ntBASIC5.53□□□□□ -1.52
CDK3Q00526 AC100832.1-201ENST00000471945 383 ntBASIC5.53□□□□□ -1.52
CDK3Q00526 RN7SL184P-201ENST00000488308 297 ntBASIC5.53□□□□□ -1.52
CDK3Q00526 EIF3LP3-201ENST00000495197 822 ntBASIC5.53□□□□□ -1.52
CDK3Q00526 AC108693.1-201ENST00000496068 432 ntBASIC5.53□□□□□ -1.52
CDK3Q00526 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CDK3Q00526 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.53□□□□□ -1.52
CDK3Q00526 ACTR6P1-201ENST00000514311 1104 ntBASIC5.53□□□□□ -1.52
CDK3Q00526 RFPL4AP3-201ENST00000515267 345 ntBASIC5.53□□□□□ -1.52
CDK3Q00526 RN7SKP67-201ENST00000515905 235 ntBASIC5.53□□□□□ -1.52
CDK3Q00526 IGKV2-18-201ENST00000522607 343 ntBASIC5.53□□□□□ -1.52
CDK3Q00526 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.53□□□□□ -1.52
CDK3Q00526 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.53□□□□□ -1.52
CDK3Q00526 PMS2P3-207ENST00000529061 717 ntBASIC5.53□□□□□ -1.52
CDK3Q00526 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.53□□□□□ -1.52
CDK3Q00526 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.53□□□□□ -1.52
CDK3Q00526 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.53□□□□□ -1.52
CDK3Q00526 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.53□□□□□ -1.52
CDK3Q00526 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.53□□□□□ -1.52
CDK3Q00526 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CDK3Q00526 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.53□□□□□ -1.52
CDK3Q00526 AL138960.1-201ENST00000613838 513 ntBASIC5.53□□□□□ -1.52
CDK3Q00526 MIR8080-201ENST00000622224 89 ntBASIC5.53□□□□□ -1.52
CDK3Q00526 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.53□□□□□ -1.52
CDK3Q00526 AC091948.2-201ENST00000636510 279 ntBASIC5.53□□□□□ -1.52
CDK3Q00526 AC119674.1-220ENST00000641502 1048 ntBASIC5.53□□□□□ -1.52
CDK3Q00526 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
CDK3Q00526 AL158152.1-201ENST00000602652 1435 ntBASIC5.53□□□□□ -1.52
CDK3Q00526 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
CDK3Q00526 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.53□□□□□ -1.52
CDK3Q00526 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CDK3Q00526 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
CDK3Q00526 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
CDK3Q00526 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.53□□□□□ -1.52
CDK3Q00526 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CDK3Q00526 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
CDK3Q00526 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
CDK3Q00526 NAMPTP1-201ENST00000440465 2514 ntBASIC5.52□□□□□ -1.53
CDK3Q00526 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CDK3Q00526 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CDK3Q00526 AC130360.2-201ENST00000533477 1556 ntBASIC5.52□□□□□ -1.53
CDK3Q00526 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
CDK3Q00526 AL359955.1-201ENST00000455242 3275 ntBASIC5.52□□□□□ -1.53
CDK3Q00526 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CDK3Q00526 RNA5SP319-201ENST00000362768 119 ntBASIC5.52□□□□□ -1.53
CDK3Q00526 RNA5SP326-201ENST00000363209 110 ntBASIC5.52□□□□□ -1.53
CDK3Q00526 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CDK3Q00526 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.52□□□□□ -1.53
CDK3Q00526 AL589655.1-201ENST00000405398 482 ntBASIC5.52□□□□□ -1.53
CDK3Q00526 AL009179.1-201ENST00000406085 265 ntBASIC5.52□□□□□ -1.53
CDK3Q00526 TRIM60P17-201ENST00000415181 719 ntBASIC5.52□□□□□ -1.53
CDK3Q00526 RNF10P1-201ENST00000418589 369 ntBASIC5.52□□□□□ -1.53
CDK3Q00526 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.52□□□□□ -1.53
CDK3Q00526 SPRYD7P1-201ENST00000443861 570 ntBASIC5.52□□□□□ -1.53
CDK3Q00526 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.52□□□□□ -1.53
CDK3Q00526 AC022336.1-201ENST00000475510 337 ntBASIC5.52□□□□□ -1.53
CDK3Q00526 SIAH1P1-201ENST00000479411 923 ntBASIC5.52□□□□□ -1.53
CDK3Q00526 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.52□□□□□ -1.53
CDK3Q00526 AC105420.1-201ENST00000504389 582 ntBASIC5.52□□□□□ -1.53
CDK3Q00526 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.52□□□□□ -1.53
CDK3Q00526 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
CDK3Q00526 SCARNA21.2-201ENST00000516600 166 ntBASIC5.52□□□□□ -1.53
CDK3Q00526 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.52□□□□□ -1.53
CDK3Q00526 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC5.52□□□□□ -1.53
CDK3Q00526 AC137627.1-201ENST00000545761 289 ntBASIC5.52□□□□□ -1.53
CDK3Q00526 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.52□□□□□ -1.53
CDK3Q00526 AL731537.2-201ENST00000561565 951 ntBASIC5.52□□□□□ -1.53
CDK3Q00526 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CDK3Q00526 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CDK3Q00526 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.52□□□□□ -1.53
CDK3Q00526 AC060780.2-201ENST00000589047 198 ntBASIC5.52□□□□□ -1.53
CDK3Q00526 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.52□□□□□ -1.53
CDK3Q00526 AC010245.2-201ENST00000606908 1167 ntBASIC5.52□□□□□ -1.53
CDK3Q00526 AP000864.1-201ENST00000609424 650 ntBASIC5.52□□□□□ -1.53
CDK3Q00526 AC007204.2-201ENST00000615022 616 ntBASIC5.52□□□□□ -1.53
CDK3Q00526 AC009032.1-201ENST00000617574 431 ntBASIC5.52□□□□□ -1.53
CDK3Q00526 AC026367.3-201ENST00000619032 590 ntBASIC5.52□□□□□ -1.53
CDK3Q00526 AC132068.1-201ENST00000623805 459 ntBASIC5.52□□□□□ -1.53
CDK3Q00526 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC5.52□□□□□ -1.53
CDK3Q00526 AL163152.1-201ENST00000642001 374 ntBASIC5.52□□□□□ -1.53
CDK3Q00526 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CDK3Q00526 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CDK3Q00526 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CDK3Q00526 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms