Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 AC063949.1-201ENST00000552900 865 ntBASIC7.53□□□□□ -1.2
CLTCL1P53675 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC7.53□□□□□ -1.2
CLTCL1P53675 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CLTCL1P53675 EPS15P1-202ENST00000459691 2071 ntBASIC7.53□□□□□ -1.2
CLTCL1P53675 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC7.53□□□□□ -1.2
CLTCL1P53675 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC7.53□□□□□ -1.2
CLTCL1P53675 MAPK10-270ENST00000641102 3538 ntBASIC7.53□□□□□ -1.2
CLTCL1P53675 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CLTCL1P53675 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CLTCL1P53675 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC7.53□□□□□ -1.2
CLTCL1P53675 PPP1R12B-216ENST00000608999 15248 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CLTCL1P53675 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CLTCL1P53675 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CLTCL1P53675 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
CLTCL1P53675 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC7.53□□□□□ -1.2
CLTCL1P53675 AL035419.1-201ENST00000397037 564 ntBASIC7.52□□□□□ -1.2
CLTCL1P53675 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC7.52□□□□□ -1.2
CLTCL1P53675 RPL7P11-201ENST00000437586 658 ntBASIC7.52□□□□□ -1.2
CLTCL1P53675 AC011753.3-201ENST00000443436 406 ntBASIC7.52□□□□□ -1.2
CLTCL1P53675 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC7.52□□□□□ -1.2
CLTCL1P53675 RPL7P16-201ENST00000479738 738 ntBASIC7.52□□□□□ -1.2
CLTCL1P53675 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
CLTCL1P53675 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC7.52□□□□□ -1.2
CLTCL1P53675 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
CLTCL1P53675 AL356752.1-201ENST00000615844 593 ntBASIC7.52□□□□□ -1.2
CLTCL1P53675 AC099654.6-201ENST00000636487 512 ntBASIC7.52□□□□□ -1.2
CLTCL1P53675 AP000550.3-201ENST00000637734 379 ntBASIC7.52□□□□□ -1.2
CLTCL1P53675 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC7.52□□□□□ -1.2
CLTCL1P53675 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CLTCL1P53675 CASC19-221ENST00000641309 1382 ntBASIC7.52□□□□□ -1.21
CLTCL1P53675 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC7.52□□□□□ -1.21
CLTCL1P53675 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CLTCL1P53675 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CLTCL1P53675 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CLTCL1P53675 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CLTCL1P53675 DPY19L2P2-203ENST00000435536 1858 ntBASIC7.52□□□□□ -1.21
CLTCL1P53675 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CLTCL1P53675 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC7.52□□□□□ -1.21
CLTCL1P53675 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC7.52□□□□□ -1.21
CLTCL1P53675 RPL7P41-201ENST00000485823 957 ntBASIC7.52□□□□□ -1.21
CLTCL1P53675 AC008897.1-201ENST00000494006 347 ntBASIC7.52□□□□□ -1.21
CLTCL1P53675 AC097173.1-201ENST00000505862 819 ntBASIC7.52□□□□□ -1.21
CLTCL1P53675 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC7.52□□□□□ -1.21
CLTCL1P53675 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC7.52□□□□□ -1.21
CLTCL1P53675 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC7.52□□□□□ -1.21
CLTCL1P53675 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC7.52□□□□□ -1.21
CLTCL1P53675 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC7.52□□□□□ -1.21
CLTCL1P53675 NACA-203ENST00000454682 6629 ntTSL 5 BASIC7.52□□□□□ -1.21
CLTCL1P53675 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CLTCL1P53675 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
CLTCL1P53675 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CLTCL1P53675 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC7.51□□□□□ -1.21
CLTCL1P53675 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CLTCL1P53675 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
CLTCL1P53675 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
CLTCL1P53675 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC7.51□□□□□ -1.21
CLTCL1P53675 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC7.51□□□□□ -1.21
CLTCL1P53675 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
CLTCL1P53675 MCM8-205ENST00000610722 7486 ntAPPRIS P4 TSL 1 (best) BASIC7.51□□□□□ -1.21
CLTCL1P53675 RNU1-74P-201ENST00000384108 171 ntBASIC7.51□□□□□ -1.21
CLTCL1P53675 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
CLTCL1P53675 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC7.51□□□□□ -1.21
CLTCL1P53675 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC7.51□□□□□ -1.21
CLTCL1P53675 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC7.51□□□□□ -1.21
CLTCL1P53675 AL772161.1-201ENST00000439130 476 ntBASIC7.51□□□□□ -1.21
CLTCL1P53675 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC7.51□□□□□ -1.21
CLTCL1P53675 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC7.51□□□□□ -1.21
CLTCL1P53675 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC7.51□□□□□ -1.21
CLTCL1P53675 RPS29P22-201ENST00000472363 168 ntBASIC7.51□□□□□ -1.21
CLTCL1P53675 AC093890.1-201ENST00000502554 540 ntBASIC7.51□□□□□ -1.21
CLTCL1P53675 COX6B1P5-201ENST00000509843 249 ntBASIC7.51□□□□□ -1.21
CLTCL1P53675 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC7.51□□□□□ -1.21
CLTCL1P53675 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC7.51□□□□□ -1.21
CLTCL1P53675 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC7.51□□□□□ -1.21
CLTCL1P53675 AC104785.1-201ENST00000603220 588 ntBASIC7.51□□□□□ -1.21
CLTCL1P53675 AL031320.1-201ENST00000604177 357 ntBASIC7.51□□□□□ -1.21
CLTCL1P53675 NAA60-237ENST00000615865 326 ntTSL 5 BASIC7.51□□□□□ -1.21
CLTCL1P53675 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CLTCL1P53675 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC7.51□□□□□ -1.21
CLTCL1P53675 SELE-205ENST00000367777 3576 ntTSL 5 BASIC7.5□□□□□ -1.21
CLTCL1P53675 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CLTCL1P53675 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CLTCL1P53675 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC7.5□□□□□ -1.21
CLTCL1P53675 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC7.5□□□□□ -1.21
CLTCL1P53675 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC7.5□□□□□ -1.21
CLTCL1P53675 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CLTCL1P53675 HNRNPR-210ENST00000478691 7646 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CLTCL1P53675 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CLTCL1P53675 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
CLTCL1P53675 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC7.5□□□□□ -1.21
CLTCL1P53675 AC008072.1-201ENST00000434254 824 ntBASIC7.5□□□□□ -1.21
CLTCL1P53675 ELOCP3-201ENST00000439303 348 ntBASIC7.5□□□□□ -1.21
CLTCL1P53675 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC7.5□□□□□ -1.21
CLTCL1P53675 GLUD1P3-202ENST00000508551 200 ntBASIC7.5□□□□□ -1.21
CLTCL1P53675 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC7.5□□□□□ -1.21
CLTCL1P53675 OR7H2P-201ENST00000513483 306 ntBASIC7.5□□□□□ -1.21
CLTCL1P53675 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC7.5□□□□□ -1.21
CLTCL1P53675 PCNPP1-201ENST00000552501 511 ntBASIC7.5□□□□□ -1.21
CLTCL1P53675 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC7.5□□□□□ -1.21
CLTCL1P53675 AP001267.4-201ENST00000602598 545 ntBASIC7.5□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms