Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AL365400.2-201ENST00000605604 902 ntBASIC5.29□□□□□ -1.56
SOX2P48431 SNORA74.4-201ENST00000607595 199 ntBASIC5.29□□□□□ -1.56
SOX2P48431 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SOX2P48431 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC5.29□□□□□ -1.56
SOX2P48431 AL359513.1-201ENST00000614364 557 ntBASIC5.29□□□□□ -1.56
SOX2P48431 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
SOX2P48431 AC022079.2-201ENST00000619739 566 ntBASIC5.29□□□□□ -1.56
SOX2P48431 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC5.29□□□□□ -1.56
SOX2P48431 CU459211.1-201ENST00000635667 749 ntBASIC5.29□□□□□ -1.56
SOX2P48431 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
SOX2P48431 AC008691.1-209ENST00000642094 814 ntBASIC5.29□□□□□ -1.56
SOX2P48431 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
SOX2P48431 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
SOX2P48431 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
SOX2P48431 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SOX2P48431 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
SOX2P48431 AC005224.3-201ENST00000584683 2140 ntBASIC5.29□□□□□ -1.56
SOX2P48431 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.29□□□□□ -1.56
SOX2P48431 AC140134.1-201ENST00000511830 3544 ntBASIC5.28□□□□□ -1.56
SOX2P48431 AC004076.2-201ENST00000620532 3323 ntBASIC5.28□□□□□ -1.56
SOX2P48431 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.28□□□□□ -1.56
SOX2P48431 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
SOX2P48431 AC092451.3-201ENST00000625067 1343 ntBASIC5.28□□□□□ -1.56
SOX2P48431 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SOX2P48431 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5.28□□□□□ -1.56
SOX2P48431 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SOX2P48431 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
SOX2P48431 AC007342.7-201ENST00000624610 2337 ntBASIC5.28□□□□□ -1.56
SOX2P48431 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SOX2P48431 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SOX2P48431 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SOX2P48431 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
SOX2P48431 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SOX2P48431 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
SOX2P48431 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SOX2P48431 YWHAZP4-201ENST00000392459 708 ntBASIC5.28□□□□□ -1.56
SOX2P48431 GAPDHP15-201ENST00000398586 975 ntBASIC5.28□□□□□ -1.56
SOX2P48431 AL033519.1-201ENST00000407266 307 ntBASIC5.28□□□□□ -1.56
SOX2P48431 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC5.28□□□□□ -1.56
SOX2P48431 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC5.28□□□□□ -1.56
SOX2P48431 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.28□□□□□ -1.56
SOX2P48431 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC5.28□□□□□ -1.56
SOX2P48431 AC005005.2-201ENST00000420779 380 ntBASIC5.28□□□□□ -1.56
SOX2P48431 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC5.28□□□□□ -1.56
SOX2P48431 ELOBP4-201ENST00000423418 296 ntBASIC5.28□□□□□ -1.56
SOX2P48431 OSTCP4-201ENST00000424397 449 ntBASIC5.28□□□□□ -1.56
SOX2P48431 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC5.28□□□□□ -1.56
SOX2P48431 AC092646.1-201ENST00000427142 901 ntBASIC5.28□□□□□ -1.56
SOX2P48431 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.28□□□□□ -1.56
SOX2P48431 RPL12P28-201ENST00000430852 489 ntBASIC5.28□□□□□ -1.56
SOX2P48431 NDUFA5P10-201ENST00000432147 357 ntBASIC5.28□□□□□ -1.56
SOX2P48431 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.28□□□□□ -1.56
SOX2P48431 KRT8P51-201ENST00000438938 274 ntBASIC5.28□□□□□ -1.56
SOX2P48431 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.28□□□□□ -1.56
SOX2P48431 AC069540.1-201ENST00000446320 988 ntBASIC5.28□□□□□ -1.56
SOX2P48431 AC008280.2-201ENST00000455473 307 ntBASIC5.28□□□□□ -1.56
SOX2P48431 TREML3P-201ENST00000457327 501 ntBASIC5.28□□□□□ -1.56
SOX2P48431 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC5.28□□□□□ -1.56
SOX2P48431 AC105420.1-201ENST00000504389 582 ntBASIC5.28□□□□□ -1.56
SOX2P48431 AC073648.3-201ENST00000504939 925 ntBASIC5.28□□□□□ -1.56
SOX2P48431 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC5.28□□□□□ -1.56
SOX2P48431 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC5.28□□□□□ -1.56
SOX2P48431 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC5.28□□□□□ -1.56
SOX2P48431 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.28□□□□□ -1.56
SOX2P48431 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.28□□□□□ -1.56
SOX2P48431 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.28□□□□□ -1.56
SOX2P48431 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC5.28□□□□□ -1.56
SOX2P48431 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.28□□□□□ -1.56
SOX2P48431 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.28□□□□□ -1.56
SOX2P48431 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC5.28□□□□□ -1.56
SOX2P48431 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC5.28□□□□□ -1.56
SOX2P48431 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC5.28□□□□□ -1.56
SOX2P48431 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC5.28□□□□□ -1.56
SOX2P48431 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC5.28□□□□□ -1.56
SOX2P48431 AC068020.1-201ENST00000594215 661 ntBASIC5.28□□□□□ -1.56
SOX2P48431 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.28□□□□□ -1.56
SOX2P48431 AC130352.1-201ENST00000602979 661 ntBASIC5.28□□□□□ -1.56
SOX2P48431 LSM1P2-201ENST00000604911 322 ntBASIC5.28□□□□□ -1.56
SOX2P48431 AC025175.1-201ENST00000606482 759 ntBASIC5.28□□□□□ -1.56
SOX2P48431 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC5.28□□□□□ -1.56
SOX2P48431 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.28□□□□□ -1.56
SOX2P48431 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC5.28□□□□□ -1.56
SOX2P48431 AL355493.4-201ENST00000618530 292 ntBASIC5.28□□□□□ -1.56
SOX2P48431 AC025262.3-201ENST00000623666 360 ntBASIC5.28□□□□□ -1.56
SOX2P48431 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.28□□□□□ -1.56
SOX2P48431 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
SOX2P48431 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SOX2P48431 AC027279.4-201ENST00000624371 2072 ntBASIC5.28□□□□□ -1.56
SOX2P48431 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
SOX2P48431 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SOX2P48431 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SOX2P48431 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SOX2P48431 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
SOX2P48431 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
SOX2P48431 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SOX2P48431 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SOX2P48431 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
SOX2P48431 NEPNP-201ENST00000404786 1371 ntBASIC5.28□□□□□ -1.56
SOX2P48431 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SOX2P48431 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms