Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
CXCL12P48061 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC5.45□□□□□ -1.54
CXCL12P48061 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CXCL12P48061 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC5.45□□□□□ -1.54
CXCL12P48061 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC5.45□□□□□ -1.54
CXCL12P48061 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.45□□□□□ -1.54
CXCL12P48061 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CXCL12P48061 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CXCL12P48061 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
CXCL12P48061 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
CXCL12P48061 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
CXCL12P48061 AC013442.1-201ENST00000397347 228 ntBASIC5.45□□□□□ -1.54
CXCL12P48061 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.45□□□□□ -1.54
CXCL12P48061 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.45□□□□□ -1.54
CXCL12P48061 RPL12P17-201ENST00000432393 498 ntBASIC5.45□□□□□ -1.54
CXCL12P48061 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.45□□□□□ -1.54
CXCL12P48061 NANOGP9-201ENST00000439890 892 ntBASIC5.45□□□□□ -1.54
CXCL12P48061 Z92846.1-201ENST00000456203 268 ntBASIC5.45□□□□□ -1.54
CXCL12P48061 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5.45□□□□□ -1.54
CXCL12P48061 RPS29P33-201ENST00000456717 146 ntBASIC5.45□□□□□ -1.54
CXCL12P48061 AL445687.2-201ENST00000458156 728 ntBASIC5.45□□□□□ -1.54
CXCL12P48061 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.45□□□□□ -1.54
CXCL12P48061 RPL7P40-201ENST00000481703 745 ntBASIC5.45□□□□□ -1.54
CXCL12P48061 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.45□□□□□ -1.54
CXCL12P48061 TOMM22P4-201ENST00000511318 336 ntBASIC5.45□□□□□ -1.54
CXCL12P48061 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.45□□□□□ -1.54
CXCL12P48061 EDDM3DP-201ENST00000554692 434 ntBASIC5.45□□□□□ -1.54
CXCL12P48061 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC5.45□□□□□ -1.54
CXCL12P48061 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC5.45□□□□□ -1.54
CXCL12P48061 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.45□□□□□ -1.54
CXCL12P48061 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.45□□□□□ -1.54
CXCL12P48061 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.45□□□□□ -1.54
CXCL12P48061 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.45□□□□□ -1.54
CXCL12P48061 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CXCL12P48061 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CXCL12P48061 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.45□□□□□ -1.54
CXCL12P48061 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CXCL12P48061 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC5.45□□□□□ -1.54
CXCL12P48061 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.45□□□□□ -1.54
CXCL12P48061 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC5.45□□□□□ -1.54
CXCL12P48061 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.45□□□□□ -1.54
CXCL12P48061 AC062029.1-202ENST00000606164 3651 ntBASIC5.45□□□□□ -1.54
CXCL12P48061 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC5.45□□□□□ -1.54
CXCL12P48061 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CXCL12P48061 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC5.44□□□□□ -1.54
CXCL12P48061 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CXCL12P48061 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.44□□□□□ -1.54
CXCL12P48061 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.44□□□□□ -1.54
CXCL12P48061 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
CXCL12P48061 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CXCL12P48061 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC5.44□□□□□ -1.54
CXCL12P48061 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CXCL12P48061 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC5.44□□□□□ -1.54
CXCL12P48061 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
CXCL12P48061 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CXCL12P48061 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
CXCL12P48061 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
CXCL12P48061 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CXCL12P48061 RN7SKP104-201ENST00000362605 328 ntBASIC5.44□□□□□ -1.54
CXCL12P48061 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
CXCL12P48061 OR4K12P-201ENST00000406538 961 ntBASIC5.44□□□□□ -1.54
CXCL12P48061 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC5.44□□□□□ -1.54
CXCL12P48061 AL353626.3-201ENST00000413399 657 ntBASIC5.44□□□□□ -1.54
CXCL12P48061 AL365220.1-201ENST00000432923 399 ntBASIC5.44□□□□□ -1.54
CXCL12P48061 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CXCL12P48061 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.44□□□□□ -1.54
CXCL12P48061 AC096754.1-201ENST00000508904 818 ntBASIC5.44□□□□□ -1.54
CXCL12P48061 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.44□□□□□ -1.54
CXCL12P48061 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.44□□□□□ -1.54
CXCL12P48061 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC5.44□□□□□ -1.54
CXCL12P48061 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC5.44□□□□□ -1.54
CXCL12P48061 AP004607.2-201ENST00000533949 322 ntBASIC5.44□□□□□ -1.54
CXCL12P48061 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
CXCL12P48061 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.44□□□□□ -1.54
CXCL12P48061 MIR4697-201ENST00000582977 78 ntBASIC5.44□□□□□ -1.54
CXCL12P48061 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.44□□□□□ -1.54
CXCL12P48061 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.44□□□□□ -1.54
CXCL12P48061 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.44□□□□□ -1.54
CXCL12P48061 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC5.44□□□□□ -1.54
CXCL12P48061 AC009597.2-201ENST00000604659 592 ntBASIC5.44□□□□□ -1.54
CXCL12P48061 AL133481.2-203ENST00000607558 139 ntBASIC5.44□□□□□ -1.54
CXCL12P48061 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CXCL12P48061 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CXCL12P48061 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
CXCL12P48061 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CXCL12P48061 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
CXCL12P48061 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CXCL12P48061 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.44□□□□□ -1.54
CXCL12P48061 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC5.44□□□□□ -1.54
CXCL12P48061 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CXCL12P48061 AC026951.1-201ENST00000559530 2459 ntBASIC5.43□□□□□ -1.54
CXCL12P48061 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC5.43□□□□□ -1.54
CXCL12P48061 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.43□□□□□ -1.54
CXCL12P48061 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.43□□□□□ -1.54
CXCL12P48061 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CXCL12P48061 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CXCL12P48061 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.43□□□□□ -1.54
CXCL12P48061 AP000866.6-201ENST00000638898 3579 ntBASIC5.43□□□□□ -1.54
CXCL12P48061 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC5.43□□□□□ -1.54
CXCL12P48061 THAP12P4-201ENST00000528321 2266 ntBASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms