Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HNF4AP41235 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HNF4AP41235 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.6□□□□□ -1.51
HNF4AP41235 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.59□□□□□ -1.51
HNF4AP41235 AC019072.1-201ENST00000604535 1551 ntBASIC5.59□□□□□ -1.51
HNF4AP41235 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.59□□□□□ -1.51
HNF4AP41235 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
HNF4AP41235 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.59□□□□□ -1.51
HNF4AP41235 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HNF4AP41235 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.59□□□□□ -1.51
HNF4AP41235 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HNF4AP41235 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HNF4AP41235 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HNF4AP41235 PDZK1P1-202ENST00000425209 1350 ntBASIC5.59□□□□□ -1.51
HNF4AP41235 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.59□□□□□ -1.51
HNF4AP41235 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HNF4AP41235 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HNF4AP41235 RNU6-670P-201ENST00000364312 104 ntBASIC5.59□□□□□ -1.51
HNF4AP41235 U3.10-201ENST00000364459 214 ntBASIC5.59□□□□□ -1.51
HNF4AP41235 RNA5SP91-201ENST00000390902 119 ntBASIC5.59□□□□□ -1.51
HNF4AP41235 AL139039.2-201ENST00000407436 479 ntBASIC5.59□□□□□ -1.51
HNF4AP41235 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC5.59□□□□□ -1.51
HNF4AP41235 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.59□□□□□ -1.51
HNF4AP41235 AC022022.1-201ENST00000430304 178 ntBASIC5.59□□□□□ -1.51
HNF4AP41235 BX276092.6-201ENST00000430476 250 ntBASIC5.59□□□□□ -1.51
HNF4AP41235 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC5.59□□□□□ -1.51
HNF4AP41235 AP000936.3-201ENST00000438127 255 ntBASIC5.59□□□□□ -1.51
HNF4AP41235 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.59□□□□□ -1.51
HNF4AP41235 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC5.59□□□□□ -1.51
HNF4AP41235 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.59□□□□□ -1.51
HNF4AP41235 OR7E116P-201ENST00000448529 957 ntBASIC5.59□□□□□ -1.51
HNF4AP41235 BX276092.8-201ENST00000455722 250 ntBASIC5.59□□□□□ -1.51
HNF4AP41235 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC5.59□□□□□ -1.51
HNF4AP41235 NDUFA5P5-201ENST00000468361 342 ntBASIC5.59□□□□□ -1.51
HNF4AP41235 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC5.59□□□□□ -1.51
HNF4AP41235 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.59□□□□□ -1.51
HNF4AP41235 HAUS1P1-201ENST00000505275 832 ntBASIC5.59□□□□□ -1.51
HNF4AP41235 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.59□□□□□ -1.51
HNF4AP41235 AC074255.1-201ENST00000511259 501 ntBASIC5.59□□□□□ -1.51
HNF4AP41235 TRIM77BP-201ENST00000524985 1119 ntBASIC5.59□□□□□ -1.51
HNF4AP41235 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.59□□□□□ -1.51
HNF4AP41235 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.59□□□□□ -1.51
HNF4AP41235 AL356801.1-201ENST00000559320 294 ntBASIC5.59□□□□□ -1.51
HNF4AP41235 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.59□□□□□ -1.51
HNF4AP41235 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.59□□□□□ -1.51
HNF4AP41235 ZNF322P1-201ENST00000568013 1209 ntBASIC5.59□□□□□ -1.51
HNF4AP41235 AC092121.1-201ENST00000569452 202 ntBASIC5.59□□□□□ -1.51
HNF4AP41235 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.59□□□□□ -1.51
HNF4AP41235 AC018809.2-201ENST00000602436 3823 ntBASIC5.59□□□□□ -1.51
HNF4AP41235 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.59□□□□□ -1.51
HNF4AP41235 AP001005.3-201ENST00000622049 129 ntBASIC5.59□□□□□ -1.51
HNF4AP41235 AL359742.1-201ENST00000622497 540 ntBASIC5.59□□□□□ -1.51
HNF4AP41235 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.59□□□□□ -1.51
HNF4AP41235 FO681491.1-202ENST00000623392 737 ntBASIC5.59□□□□□ -1.51
HNF4AP41235 AC129778.1-202ENST00000623812 261 ntBASIC5.59□□□□□ -1.51
HNF4AP41235 AL591379.1-207ENST00000635982 261 ntBASIC5.59□□□□□ -1.51
HNF4AP41235 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.59□□□□□ -1.51
HNF4AP41235 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.59□□□□□ -1.51
HNF4AP41235 AC138907.8-201ENST00000623981 2256 ntBASIC5.59□□□□□ -1.51
HNF4AP41235 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HNF4AP41235 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
HNF4AP41235 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
HNF4AP41235 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.59□□□□□ -1.52
HNF4AP41235 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HNF4AP41235 AP000473.2-201ENST00000602659 1537 ntBASIC5.58□□□□□ -1.52
HNF4AP41235 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HNF4AP41235 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HNF4AP41235 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
HNF4AP41235 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
HNF4AP41235 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.58□□□□□ -1.52
HNF4AP41235 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HNF4AP41235 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.58□□□□□ -1.52
HNF4AP41235 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
HNF4AP41235 RNU6-618P-201ENST00000363518 112 ntBASIC5.58□□□□□ -1.52
HNF4AP41235 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC5.58□□□□□ -1.52
HNF4AP41235 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.58□□□□□ -1.52
HNF4AP41235 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.58□□□□□ -1.52
HNF4AP41235 AC240504.1-201ENST00000395709 845 ntBASIC5.58□□□□□ -1.52
HNF4AP41235 EI24P3-201ENST00000399046 1062 ntBASIC5.58□□□□□ -1.52
HNF4AP41235 RN7SKP29-201ENST00000410957 272 ntBASIC5.58□□□□□ -1.52
HNF4AP41235 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.58□□□□□ -1.52
HNF4AP41235 GNG5P5-201ENST00000420444 220 ntBASIC5.58□□□□□ -1.52
HNF4AP41235 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HNF4AP41235 KCTD9P1-201ENST00000430462 1167 ntBASIC5.58□□□□□ -1.52
HNF4AP41235 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.58□□□□□ -1.52
HNF4AP41235 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
HNF4AP41235 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.58□□□□□ -1.52
HNF4AP41235 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.58□□□□□ -1.52
HNF4AP41235 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.58□□□□□ -1.52
HNF4AP41235 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.58□□□□□ -1.52
HNF4AP41235 AL157884.3-201ENST00000448273 1184 ntBASIC5.58□□□□□ -1.52
HNF4AP41235 RNU6-775P-201ENST00000459318 96 ntBASIC5.58□□□□□ -1.52
HNF4AP41235 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.58□□□□□ -1.52
HNF4AP41235 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HNF4AP41235 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.58□□□□□ -1.52
HNF4AP41235 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.58□□□□□ -1.52
HNF4AP41235 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC5.58□□□□□ -1.52
HNF4AP41235 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.58□□□□□ -1.52
HNF4AP41235 AC002069.2-201ENST00000603580 883 ntBASIC5.58□□□□□ -1.52
HNF4AP41235 AC023813.4-201ENST00000607580 580 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 147.9 ms