Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
CLIP1P30622 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
CLIP1P30622 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC8.5□□□□□ -1.05
CLIP1P30622 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
CLIP1P30622 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
CLIP1P30622 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
CLIP1P30622 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
CLIP1P30622 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
CLIP1P30622 MIR105-1-201ENST00000385222 81 ntBASIC8.49□□□□□ -1.05
CLIP1P30622 RNU6ATAC7P-201ENST00000408111 127 ntBASIC8.49□□□□□ -1.05
CLIP1P30622 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC8.49□□□□□ -1.05
CLIP1P30622 RPS26P13-201ENST00000419030 330 ntBASIC8.49□□□□□ -1.05
CLIP1P30622 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC8.49□□□□□ -1.05
CLIP1P30622 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC8.49□□□□□ -1.05
CLIP1P30622 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC8.49□□□□□ -1.05
CLIP1P30622 SNORA26.10-201ENST00000516427 141 ntBASIC8.49□□□□□ -1.05
CLIP1P30622 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC8.49□□□□□ -1.05
CLIP1P30622 PDCD6IPP2-207ENST00000566321 1069 ntBASIC8.49□□□□□ -1.05
CLIP1P30622 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC8.49□□□□□ -1.05
CLIP1P30622 AC092747.4-201ENST00000620519 1861 ntBASIC8.49□□□□□ -1.05
CLIP1P30622 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC8.49□□□□□ -1.05
CLIP1P30622 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
CLIP1P30622 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
CLIP1P30622 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
CLIP1P30622 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC8.48□□□□□ -1.05
CLIP1P30622 RN7SKP17-201ENST00000411242 351 ntBASIC8.48□□□□□ -1.05
CLIP1P30622 RPL37P18-201ENST00000411602 243 ntBASIC8.48□□□□□ -1.05
CLIP1P30622 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC8.48□□□□□ -1.05
CLIP1P30622 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
CLIP1P30622 AC021876.1-201ENST00000425959 359 ntBASIC8.48□□□□□ -1.05
CLIP1P30622 TAAR4P-201ENST00000454843 1039 ntBASIC8.48□□□□□ -1.05
CLIP1P30622 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC8.48□□□□□ -1.05
CLIP1P30622 AC079168.1-201ENST00000458741 345 ntBASIC8.48□□□□□ -1.05
CLIP1P30622 AC090114.3-201ENST00000479267 829 ntBASIC8.48□□□□□ -1.05
CLIP1P30622 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC8.48□□□□□ -1.05
CLIP1P30622 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC8.48□□□□□ -1.05
CLIP1P30622 AC134349.2-201ENST00000535136 910 ntBASIC8.48□□□□□ -1.05
CLIP1P30622 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC8.48□□□□□ -1.05
CLIP1P30622 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC8.48□□□□□ -1.05
CLIP1P30622 AP003400.3-201ENST00000624904 346 ntBASIC8.48□□□□□ -1.05
CLIP1P30622 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC8.48□□□□□ -1.05
CLIP1P30622 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
CLIP1P30622 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC8.48□□□□□ -1.05
CLIP1P30622 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
CLIP1P30622 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC8.48□□□□□ -1.05
CLIP1P30622 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
CLIP1P30622 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC8.47□□□□□ -1.05
CLIP1P30622 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
CLIP1P30622 RN7SKP145-201ENST00000363291 303 ntBASIC8.47□□□□□ -1.05
CLIP1P30622 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC8.47□□□□□ -1.05
CLIP1P30622 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC8.47□□□□□ -1.05
CLIP1P30622 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC8.47□□□□□ -1.05
CLIP1P30622 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC8.47□□□□□ -1.05
CLIP1P30622 RNU6ATAC24P-201ENST00000516811 135 ntBASIC8.47□□□□□ -1.05
CLIP1P30622 AC022469.1-201ENST00000555291 656 ntTSL 3 BASIC8.47□□□□□ -1.05
CLIP1P30622 AL445528.2-201ENST00000620582 470 ntBASIC8.47□□□□□ -1.05
CLIP1P30622 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
CLIP1P30622 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
CLIP1P30622 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
CLIP1P30622 AC002090.1-201ENST00000625000 2138 ntBASIC8.47□□□□□ -1.05
CLIP1P30622 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC8.47□□□□□ -1.05
CLIP1P30622 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC8.47□□□□□ -1.05
CLIP1P30622 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC8.47□□□□□ -1.05
CLIP1P30622 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
CLIP1P30622 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC8.47□□□□□ -1.05
CLIP1P30622 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
CLIP1P30622 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
CLIP1P30622 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
CLIP1P30622 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC8.46□□□□□ -1.05
CLIP1P30622 RN7SKP126-201ENST00000411143 300 ntBASIC8.46□□□□□ -1.05
CLIP1P30622 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC8.46□□□□□ -1.05
CLIP1P30622 FABP7P2-201ENST00000429946 379 ntBASIC8.46□□□□□ -1.05
CLIP1P30622 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
CLIP1P30622 AL772161.1-201ENST00000439130 476 ntBASIC8.46□□□□□ -1.05
CLIP1P30622 MED28P3-201ENST00000444288 531 ntBASIC8.46□□□□□ -1.05
CLIP1P30622 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.05
CLIP1P30622 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC8.46□□□□□ -1.05
CLIP1P30622 AC092593.2-201ENST00000513866 913 ntBASIC8.46□□□□□ -1.05
CLIP1P30622 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC8.46□□□□□ -1.05
CLIP1P30622 HNRNPCP1-201ENST00000556181 766 ntBASIC8.46□□□□□ -1.05
CLIP1P30622 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC8.46□□□□□ -1.05
CLIP1P30622 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC8.46□□□□□ -1.05
CLIP1P30622 AC011840.5-201ENST00000582125 771 ntBASIC8.46□□□□□ -1.05
CLIP1P30622 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC8.46□□□□□ -1.05
CLIP1P30622 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.05
CLIP1P30622 AC095055.1-201ENST00000603472 1113 ntBASIC8.46□□□□□ -1.05
CLIP1P30622 AC009027.1-201ENST00000604510 479 ntBASIC8.46□□□□□ -1.05
CLIP1P30622 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC8.46□□□□□ -1.05
CLIP1P30622 AC010632.3-201ENST00000611377 369 ntBASIC8.46□□□□□ -1.05
CLIP1P30622 MIR6133-201ENST00000617057 108 ntBASIC8.46□□□□□ -1.05
CLIP1P30622 AC099654.6-201ENST00000636487 512 ntBASIC8.46□□□□□ -1.05
CLIP1P30622 AC074101.1-201ENST00000637861 241 ntBASIC8.46□□□□□ -1.05
CLIP1P30622 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC8.46□□□□□ -1.05
CLIP1P30622 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
CLIP1P30622 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC8.46□□□□□ -1.05
CLIP1P30622 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC8.46□□□□□ -1.06
CLIP1P30622 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC8.46□□□□□ -1.06
CLIP1P30622 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC8.46□□□□□ -1.06
CLIP1P30622 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC8.46□□□□□ -1.06
CLIP1P30622 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms