Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 AC073069.1-201ENST00000428657 441 ntBASIC5.56□□□□□ -1.52
TNFSF4P23510 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC5.56□□□□□ -1.52
TNFSF4P23510 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TNFSF4P23510 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC5.56□□□□□ -1.52
TNFSF4P23510 AC064862.5-201ENST00000440618 334 ntBASIC5.56□□□□□ -1.52
TNFSF4P23510 TPTE2P6-202ENST00000445572 1007 ntBASIC5.56□□□□□ -1.52
TNFSF4P23510 AC005002.1-201ENST00000447458 540 ntBASIC5.56□□□□□ -1.52
TNFSF4P23510 TPMTP4-201ENST00000450749 678 ntBASIC5.56□□□□□ -1.52
TNFSF4P23510 KF459542.1-201ENST00000450908 553 ntBASIC5.56□□□□□ -1.52
TNFSF4P23510 AL606490.1-201ENST00000452266 765 ntBASIC5.56□□□□□ -1.52
TNFSF4P23510 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC5.56□□□□□ -1.52
TNFSF4P23510 AC068522.1-201ENST00000482895 345 ntBASIC5.56□□□□□ -1.52
TNFSF4P23510 AC022206.1-201ENST00000495947 347 ntBASIC5.56□□□□□ -1.52
TNFSF4P23510 AL035404.1-201ENST00000497982 568 ntBASIC5.56□□□□□ -1.52
TNFSF4P23510 AC093720.1-201ENST00000505681 714 ntBASIC5.56□□□□□ -1.52
TNFSF4P23510 AC091860.1-201ENST00000505723 432 ntBASIC5.56□□□□□ -1.52
TNFSF4P23510 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC5.56□□□□□ -1.52
TNFSF4P23510 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.56□□□□□ -1.52
TNFSF4P23510 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
TNFSF4P23510 AC113420.1-201ENST00000507903 571 ntBASIC5.56□□□□□ -1.52
TNFSF4P23510 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC5.56□□□□□ -1.52
TNFSF4P23510 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC5.56□□□□□ -1.52
TNFSF4P23510 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC5.56□□□□□ -1.52
TNFSF4P23510 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC5.56□□□□□ -1.52
TNFSF4P23510 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC5.56□□□□□ -1.52
TNFSF4P23510 SCARNA5-201ENST00000516201 276 ntBASIC5.56□□□□□ -1.52
TNFSF4P23510 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.56□□□□□ -1.52
TNFSF4P23510 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC5.56□□□□□ -1.52
TNFSF4P23510 IGKV2-36-201ENST00000519999 223 ntBASIC5.56□□□□□ -1.52
TNFSF4P23510 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC5.56□□□□□ -1.52
TNFSF4P23510 AC023310.2-201ENST00000553844 547 ntBASIC5.56□□□□□ -1.52
TNFSF4P23510 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC5.56□□□□□ -1.52
TNFSF4P23510 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC5.56□□□□□ -1.52
TNFSF4P23510 AGGF1P5-201ENST00000567900 919 ntBASIC5.56□□□□□ -1.52
TNFSF4P23510 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC5.56□□□□□ -1.52
TNFSF4P23510 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.56□□□□□ -1.52
TNFSF4P23510 AC019257.2-201ENST00000605539 497 ntBASIC5.56□□□□□ -1.52
TNFSF4P23510 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC5.56□□□□□ -1.52
TNFSF4P23510 AC023509.5-201ENST00000617434 807 ntBASIC5.56□□□□□ -1.52
TNFSF4P23510 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC5.56□□□□□ -1.52
TNFSF4P23510 AC123767.1-202ENST00000620407 817 ntBASIC5.56□□□□□ -1.52
TNFSF4P23510 AC016717.3-201ENST00000624730 554 ntBASIC5.56□□□□□ -1.52
TNFSF4P23510 AC092608.3-201ENST00000625017 386 ntBASIC5.56□□□□□ -1.52
TNFSF4P23510 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.56□□□□□ -1.52
TNFSF4P23510 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
TNFSF4P23510 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.56□□□□□ -1.52
TNFSF4P23510 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
TNFSF4P23510 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TNFSF4P23510 IFIT1P1-201ENST00000400497 1449 ntBASIC5.56□□□□□ -1.52
TNFSF4P23510 AC125238.2-201ENST00000430003 1440 ntBASIC5.56□□□□□ -1.52
TNFSF4P23510 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TNFSF4P23510 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.56□□□□□ -1.52
TNFSF4P23510 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TNFSF4P23510 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
TNFSF4P23510 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TNFSF4P23510 AP002370.1-201ENST00000528055 1602 ntBASIC5.56□□□□□ -1.52
TNFSF4P23510 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC5.55□□□□□ -1.52
TNFSF4P23510 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC5.55□□□□□ -1.52
TNFSF4P23510 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
TNFSF4P23510 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.55□□□□□ -1.52
TNFSF4P23510 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.55□□□□□ -1.52
TNFSF4P23510 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
TNFSF4P23510 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC5.55□□□□□ -1.52
TNFSF4P23510 AC104446.1-201ENST00000613728 1321 ntBASIC5.55□□□□□ -1.52
TNFSF4P23510 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
TNFSF4P23510 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
TNFSF4P23510 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
TNFSF4P23510 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
TNFSF4P23510 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
TNFSF4P23510 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
TNFSF4P23510 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
TNFSF4P23510 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
TNFSF4P23510 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
TNFSF4P23510 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC5.55□□□□□ -1.52
TNFSF4P23510 AL360013.1-201ENST00000419031 858 ntBASIC5.55□□□□□ -1.52
TNFSF4P23510 AL139184.1-202ENST00000422303 222 ntBASIC5.55□□□□□ -1.52
TNFSF4P23510 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC5.55□□□□□ -1.52
TNFSF4P23510 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC5.55□□□□□ -1.52
TNFSF4P23510 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.55□□□□□ -1.52
TNFSF4P23510 OR10R1P-201ENST00000441524 1141 ntBASIC5.55□□□□□ -1.52
TNFSF4P23510 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC5.55□□□□□ -1.52
TNFSF4P23510 EIF2S2P2-201ENST00000447161 982 ntBASIC5.55□□□□□ -1.52
TNFSF4P23510 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC5.55□□□□□ -1.52
TNFSF4P23510 AC091959.2-201ENST00000477363 321 ntBASIC5.55□□□□□ -1.52
TNFSF4P23510 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.55□□□□□ -1.52
TNFSF4P23510 AC138517.1-201ENST00000515724 568 ntBASIC5.55□□□□□ -1.52
TNFSF4P23510 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
TNFSF4P23510 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.55□□□□□ -1.52
TNFSF4P23510 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC5.55□□□□□ -1.52
TNFSF4P23510 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC5.55□□□□□ -1.52
TNFSF4P23510 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC5.55□□□□□ -1.52
TNFSF4P23510 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC5.55□□□□□ -1.52
TNFSF4P23510 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC5.55□□□□□ -1.52
TNFSF4P23510 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC5.55□□□□□ -1.52
TNFSF4P23510 CSNK1A1P1-202ENST00000563423 981 ntBASIC5.55□□□□□ -1.52
TNFSF4P23510 AC090751.1-201ENST00000566966 267 ntBASIC5.55□□□□□ -1.52
TNFSF4P23510 AC025283.1-201ENST00000572039 734 ntBASIC5.55□□□□□ -1.52
TNFSF4P23510 MTCO1P40-201ENST00000574371 625 ntBASIC5.55□□□□□ -1.52
TNFSF4P23510 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC5.55□□□□□ -1.52
TNFSF4P23510 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 137.3 ms