Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TNFP01375 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
TNFP01375 GVINP1-202ENST00000531871 7271 ntBASIC5.31□□□□□ -1.56
TNFP01375 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
TNFP01375 AL121839.2-201ENST00000565058 6943 ntBASIC5.3□□□□□ -1.56
TNFP01375 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
TNFP01375 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
TNFP01375 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
TNFP01375 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
TNFP01375 AC093297.3-201ENST00000607056 2517 ntBASIC5.3□□□□□ -1.56
TNFP01375 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
TNFP01375 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
TNFP01375 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.3□□□□□ -1.56
TNFP01375 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
TNFP01375 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.3□□□□□ -1.56
TNFP01375 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.3□□□□□ -1.56
TNFP01375 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
TNFP01375 RPL23P2-201ENST00000320371 421 ntBASIC5.3□□□□□ -1.56
TNFP01375 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
TNFP01375 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.3□□□□□ -1.56
TNFP01375 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
TNFP01375 RN7SKP273-201ENST00000411392 314 ntBASIC5.3□□□□□ -1.56
TNFP01375 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.3□□□□□ -1.56
TNFP01375 AC005033.1-201ENST00000428904 813 ntBASIC5.3□□□□□ -1.56
TNFP01375 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC5.3□□□□□ -1.56
TNFP01375 GAPDHP58-201ENST00000438477 1006 ntBASIC5.3□□□□□ -1.56
TNFP01375 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.3□□□□□ -1.56
TNFP01375 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.3□□□□□ -1.56
TNFP01375 AC008410.1-201ENST00000483777 339 ntBASIC5.3□□□□□ -1.56
TNFP01375 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC5.3□□□□□ -1.56
TNFP01375 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.3□□□□□ -1.56
TNFP01375 AP004607.2-201ENST00000533949 322 ntBASIC5.3□□□□□ -1.56
TNFP01375 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC5.3□□□□□ -1.56
TNFP01375 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.3□□□□□ -1.56
TNFP01375 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
TNFP01375 AL139407.1-201ENST00000613826 1175 ntBASIC5.3□□□□□ -1.56
TNFP01375 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.3□□□□□ -1.56
TNFP01375 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.3□□□□□ -1.56
TNFP01375 MIR7155-201ENST00000615925 56 ntBASIC5.3□□□□□ -1.56
TNFP01375 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC5.3□□□□□ -1.56
TNFP01375 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.3□□□□□ -1.56
TNFP01375 CYP4F35P-202ENST00000636121 390 ntBASIC5.3□□□□□ -1.56
TNFP01375 CASC19-222ENST00000641321 1173 ntBASIC5.3□□□□□ -1.56
TNFP01375 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
TNFP01375 OR55B1P-203ENST00000641518 2602 ntBASIC5.3□□□□□ -1.56
TNFP01375 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
TNFP01375 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
TNFP01375 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
TNFP01375 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
TNFP01375 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
TNFP01375 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.3□□□□□ -1.56
TNFP01375 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC5.29□□□□□ -1.56
TNFP01375 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
TNFP01375 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
TNFP01375 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.29□□□□□ -1.56
TNFP01375 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
TNFP01375 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
TNFP01375 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC5.29□□□□□ -1.56
TNFP01375 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
TNFP01375 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.29□□□□□ -1.56
TNFP01375 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.29□□□□□ -1.56
TNFP01375 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.29□□□□□ -1.56
TNFP01375 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
TNFP01375 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
TNFP01375 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
TNFP01375 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
TNFP01375 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
TNFP01375 RN7SKP213-201ENST00000410746 298 ntBASIC5.29□□□□□ -1.56
TNFP01375 RPL23AP27-201ENST00000415161 451 ntBASIC5.29□□□□□ -1.56
TNFP01375 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.29□□□□□ -1.56
TNFP01375 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.29□□□□□ -1.56
TNFP01375 BX679664.2-201ENST00000439282 283 ntBASIC5.29□□□□□ -1.56
TNFP01375 CEACAMP7-201ENST00000444105 496 ntBASIC5.29□□□□□ -1.56
TNFP01375 LINC02210-201ENST00000444561 288 ntBASIC5.29□□□□□ -1.56
TNFP01375 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.29□□□□□ -1.56
TNFP01375 AC015864.1-201ENST00000496512 544 ntBASIC5.29□□□□□ -1.56
TNFP01375 SNRPCP2-201ENST00000504370 475 ntBASIC5.29□□□□□ -1.56
TNFP01375 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.29□□□□□ -1.56
TNFP01375 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.29□□□□□ -1.56
TNFP01375 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.29□□□□□ -1.56
TNFP01375 MIR4420-201ENST00000583944 77 ntBASIC5.29□□□□□ -1.56
TNFP01375 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.29□□□□□ -1.56
TNFP01375 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
TNFP01375 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC5.29□□□□□ -1.56
TNFP01375 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
TNFP01375 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
TNFP01375 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.29□□□□□ -1.56
TNFP01375 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
TNFP01375 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.29□□□□□ -1.56
TNFP01375 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
TNFP01375 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
TNFP01375 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
TNFP01375 AC104964.3-201ENST00000606115 2860 ntBASIC5.29□□□□□ -1.56
TNFP01375 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
TNFP01375 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
TNFP01375 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
TNFP01375 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TNFP01375 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
TNFP01375 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
TNFP01375 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms