Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.59□□□□□ -1.51
PKP4Q99569 RPSAP37-201ENST00000470913 821 ntBASIC5.59□□□□□ -1.51
PKP4Q99569 PDCL3P4-201ENST00000489621 720 ntBASIC5.59□□□□□ -1.51
PKP4Q99569 AC009120.1-201ENST00000493458 473 ntBASIC5.59□□□□□ -1.51
PKP4Q99569 DUTP1-201ENST00000493631 470 ntBASIC5.59□□□□□ -1.51
PKP4Q99569 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.59□□□□□ -1.51
PKP4Q99569 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC5.59□□□□□ -1.51
PKP4Q99569 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.59□□□□□ -1.51
PKP4Q99569 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.59□□□□□ -1.51
PKP4Q99569 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.59□□□□□ -1.51
PKP4Q99569 AP000859.1-201ENST00000525536 307 ntBASIC5.59□□□□□ -1.51
PKP4Q99569 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC5.59□□□□□ -1.51
PKP4Q99569 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.59□□□□□ -1.51
PKP4Q99569 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
PKP4Q99569 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC5.59□□□□□ -1.51
PKP4Q99569 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.59□□□□□ -1.51
PKP4Q99569 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC5.59□□□□□ -1.51
PKP4Q99569 AC060780.2-201ENST00000589047 198 ntBASIC5.59□□□□□ -1.51
PKP4Q99569 HIRAP1-201ENST00000605318 787 ntBASIC5.59□□□□□ -1.51
PKP4Q99569 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
PKP4Q99569 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC5.59□□□□□ -1.51
PKP4Q99569 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PKP4Q99569 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.59□□□□□ -1.51
PKP4Q99569 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PKP4Q99569 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
PKP4Q99569 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
PKP4Q99569 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.52
PKP4Q99569 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
PKP4Q99569 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.52
PKP4Q99569 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.59□□□□□ -1.52
PKP4Q99569 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PKP4Q99569 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.58□□□□□ -1.52
PKP4Q99569 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
PKP4Q99569 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.58□□□□□ -1.52
PKP4Q99569 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PKP4Q99569 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.58□□□□□ -1.52
PKP4Q99569 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PKP4Q99569 AC004656.1-201ENST00000568479 4951 ntBASIC5.58□□□□□ -1.52
PKP4Q99569 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.58□□□□□ -1.52
PKP4Q99569 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PKP4Q99569 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.58□□□□□ -1.52
PKP4Q99569 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PKP4Q99569 MIR365B-201ENST00000362317 111 ntBASIC5.58□□□□□ -1.52
PKP4Q99569 RNU4-23P-201ENST00000362839 140 ntBASIC5.58□□□□□ -1.52
PKP4Q99569 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC5.58□□□□□ -1.52
PKP4Q99569 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
PKP4Q99569 RNU6-1320P-201ENST00000390838 107 ntBASIC5.58□□□□□ -1.52
PKP4Q99569 RNU6-1269P-201ENST00000391139 107 ntBASIC5.58□□□□□ -1.52
PKP4Q99569 RPL11P3-201ENST00000395256 523 ntBASIC5.58□□□□□ -1.52
PKP4Q99569 GLS-203ENST00000409215 632 ntTSL 4 BASIC5.58□□□□□ -1.52
PKP4Q99569 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.58□□□□□ -1.52
PKP4Q99569 HMGN1P20-201ENST00000411849 300 ntBASIC5.58□□□□□ -1.52
PKP4Q99569 SLC20A1P1-201ENST00000413906 956 ntBASIC5.58□□□□□ -1.52
PKP4Q99569 METTL15P3-201ENST00000415522 1221 ntBASIC5.58□□□□□ -1.52
PKP4Q99569 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.58□□□□□ -1.52
PKP4Q99569 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC5.58□□□□□ -1.52
PKP4Q99569 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.58□□□□□ -1.52
PKP4Q99569 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.58□□□□□ -1.52
PKP4Q99569 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
PKP4Q99569 AL392003.1-201ENST00000434394 243 ntBASIC5.58□□□□□ -1.52
PKP4Q99569 RNU6-599P-201ENST00000459383 107 ntBASIC5.58□□□□□ -1.52
PKP4Q99569 RNU6-1193P-201ENST00000459461 107 ntBASIC5.58□□□□□ -1.52
PKP4Q99569 AC107015.1-201ENST00000466902 747 ntBASIC5.58□□□□□ -1.52
PKP4Q99569 AC025181.1-201ENST00000477507 416 ntBASIC5.58□□□□□ -1.52
PKP4Q99569 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PKP4Q99569 RN7SL570P-201ENST00000484405 292 ntBASIC5.58□□□□□ -1.52
PKP4Q99569 OR11I1P-201ENST00000486033 954 ntBASIC5.58□□□□□ -1.52
PKP4Q99569 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.58□□□□□ -1.52
PKP4Q99569 AC090058.1-201ENST00000498788 435 ntBASIC5.58□□□□□ -1.52
PKP4Q99569 NENFP3-201ENST00000503735 313 ntBASIC5.58□□□□□ -1.52
PKP4Q99569 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.58□□□□□ -1.52
PKP4Q99569 AC074255.1-201ENST00000511259 501 ntBASIC5.58□□□□□ -1.52
PKP4Q99569 OR8K2P-201ENST00000524645 927 ntBASIC5.58□□□□□ -1.52
PKP4Q99569 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.58□□□□□ -1.52
PKP4Q99569 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.58□□□□□ -1.52
PKP4Q99569 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.58□□□□□ -1.52
PKP4Q99569 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.58□□□□□ -1.52
PKP4Q99569 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.58□□□□□ -1.52
PKP4Q99569 MTND4LP25-201ENST00000570218 163 ntBASIC5.58□□□□□ -1.52
PKP4Q99569 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.58□□□□□ -1.52
PKP4Q99569 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC5.58□□□□□ -1.52
PKP4Q99569 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.58□□□□□ -1.52
PKP4Q99569 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.58□□□□□ -1.52
PKP4Q99569 AP005431.1-201ENST00000618479 319 ntBASIC5.58□□□□□ -1.52
PKP4Q99569 AC253576.2-201ENST00000618815 580 ntBASIC5.58□□□□□ -1.52
PKP4Q99569 AL035661.1-201ENST00000620459 1144 ntBASIC5.58□□□□□ -1.52
PKP4Q99569 RNU6-368P-201ENST00000620928 107 ntBASIC5.58□□□□□ -1.52
PKP4Q99569 RNU6-538P-201ENST00000622329 107 ntBASIC5.58□□□□□ -1.52
PKP4Q99569 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC5.58□□□□□ -1.52
PKP4Q99569 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.58□□□□□ -1.52
PKP4Q99569 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PKP4Q99569 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
PKP4Q99569 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PKP4Q99569 RLIMP2-201ENST00000427891 1563 ntBASIC5.58□□□□□ -1.52
PKP4Q99569 AC091305.2-201ENST00000624049 1576 ntBASIC5.58□□□□□ -1.52
PKP4Q99569 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PKP4Q99569 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.58□□□□□ -1.52
PKP4Q99569 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PKP4Q99569 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.58□□□□□ -1.52
PKP4Q99569 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms