Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 COX6B1P4-201ENST00000519826 484 ntBASIC6.68□□□□□ -1.34
EPHB3P54753 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
EPHB3P54753 MTCO1P49-201ENST00000523429 802 ntBASIC6.68□□□□□ -1.34
EPHB3P54753 FAU-203ENST00000525297 355 ntTSL 5 BASIC6.68□□□□□ -1.34
EPHB3P54753 OR4A17P-201ENST00000526032 904 ntBASIC6.68□□□□□ -1.34
EPHB3P54753 CYB5AP5-201ENST00000549779 389 ntBASIC6.68□□□□□ -1.34
EPHB3P54753 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC6.68□□□□□ -1.34
EPHB3P54753 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC6.68□□□□□ -1.34
EPHB3P54753 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC6.68□□□□□ -1.34
EPHB3P54753 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC6.68□□□□□ -1.34
EPHB3P54753 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC6.68□□□□□ -1.34
EPHB3P54753 AC015982.1-201ENST00000608113 465 ntBASIC6.68□□□□□ -1.34
EPHB3P54753 AC131235.4-201ENST00000609288 620 ntBASIC6.68□□□□□ -1.34
EPHB3P54753 AL365181.4-201ENST00000609800 547 ntBASIC6.68□□□□□ -1.34
EPHB3P54753 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
EPHB3P54753 AL080312.2-201ENST00000613001 630 ntBASIC6.68□□□□□ -1.34
EPHB3P54753 VN1R74P-201ENST00000613259 503 ntBASIC6.68□□□□□ -1.34
EPHB3P54753 FAM27E2-201ENST00000619668 403 ntBASIC6.68□□□□□ -1.34
EPHB3P54753 AC018755.4-201ENST00000619715 454 ntBASIC6.68□□□□□ -1.34
EPHB3P54753 Z69908.1-201ENST00000622603 247 ntBASIC6.68□□□□□ -1.34
EPHB3P54753 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC6.68□□□□□ -1.34
EPHB3P54753 MIR1322-201ENST00000638013 71 ntBASIC6.68□□□□□ -1.34
EPHB3P54753 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
EPHB3P54753 SELE-203ENST00000367775 3389 ntTSL 5 BASIC6.68□□□□□ -1.34
EPHB3P54753 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
EPHB3P54753 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
EPHB3P54753 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC6.68□□□□□ -1.34
EPHB3P54753 AC110597.1-201ENST00000562669 3176 ntBASIC6.68□□□□□ -1.34
EPHB3P54753 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.68□□□□□ -1.34
EPHB3P54753 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
EPHB3P54753 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
EPHB3P54753 AC010624.4-201ENST00000597606 1351 ntBASIC6.68□□□□□ -1.34
EPHB3P54753 AP004289.1-201ENST00000436307 2205 ntBASIC6.68□□□□□ -1.34
EPHB3P54753 AC093225.1-201ENST00000506867 1408 ntBASIC6.67□□□□□ -1.34
EPHB3P54753 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
EPHB3P54753 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
EPHB3P54753 OR52B5P-204ENST00000641744 3467 ntBASIC6.67□□□□□ -1.34
EPHB3P54753 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.67□□□□□ -1.34
EPHB3P54753 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
EPHB3P54753 AL033543.1-201ENST00000623440 13454 ntBASIC6.67□□□□□ -1.34
EPHB3P54753 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC6.67□□□□□ -1.34
EPHB3P54753 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC6.67□□□□□ -1.34
EPHB3P54753 AC011455.2-201ENST00000599320 3336 ntBASIC6.67□□□□□ -1.34
EPHB3P54753 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
EPHB3P54753 LYARP1-201ENST00000436977 1501 ntBASIC6.67□□□□□ -1.34
EPHB3P54753 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
EPHB3P54753 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.67□□□□□ -1.34
EPHB3P54753 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
EPHB3P54753 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
EPHB3P54753 AC073544.1-201ENST00000600110 1595 ntBASIC6.67□□□□□ -1.34
EPHB3P54753 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.67□□□□□ -1.34
EPHB3P54753 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
EPHB3P54753 RNA5SP350-201ENST00000363298 111 ntBASIC6.67□□□□□ -1.34
EPHB3P54753 MIR421-201ENST00000365696 85 ntBASIC6.67□□□□□ -1.34
EPHB3P54753 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC6.67□□□□□ -1.34
EPHB3P54753 FIG4-202ENST00000368941 791 ntTSL 3 BASIC6.67□□□□□ -1.34
EPHB3P54753 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
EPHB3P54753 Y_RNA.559-201ENST00000384686 107 ntBASIC6.67□□□□□ -1.34
EPHB3P54753 HSD17B7P1-201ENST00000412419 1017 ntBASIC6.67□□□□□ -1.34
EPHB3P54753 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC6.67□□□□□ -1.34
EPHB3P54753 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
EPHB3P54753 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
EPHB3P54753 AC016831.2-201ENST00000417179 352 ntBASIC6.67□□□□□ -1.34
EPHB3P54753 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
EPHB3P54753 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC6.67□□□□□ -1.34
EPHB3P54753 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC6.67□□□□□ -1.34
EPHB3P54753 AL590004.3-202ENST00000445883 451 ntBASIC6.67□□□□□ -1.34
EPHB3P54753 SEPHS1P4-201ENST00000446112 1176 ntBASIC6.67□□□□□ -1.34
EPHB3P54753 AC097463.1-201ENST00000447288 481 ntBASIC6.67□□□□□ -1.34
EPHB3P54753 GAPDHP16-201ENST00000448152 962 ntBASIC6.67□□□□□ -1.34
EPHB3P54753 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC6.67□□□□□ -1.34
EPHB3P54753 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC6.67□□□□□ -1.34
EPHB3P54753 AC093899.1-201ENST00000457984 376 ntBASIC6.67□□□□□ -1.34
EPHB3P54753 CYCSP20-201ENST00000473154 315 ntBASIC6.67□□□□□ -1.34
EPHB3P54753 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC6.67□□□□□ -1.34
EPHB3P54753 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC6.67□□□□□ -1.34
EPHB3P54753 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
EPHB3P54753 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC6.67□□□□□ -1.34
EPHB3P54753 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC6.67□□□□□ -1.34
EPHB3P54753 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC6.67□□□□□ -1.34
EPHB3P54753 AC060788.1-201ENST00000521318 469 ntBASIC6.67□□□□□ -1.34
EPHB3P54753 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC6.67□□□□□ -1.34
EPHB3P54753 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC6.67□□□□□ -1.34
EPHB3P54753 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC6.67□□□□□ -1.34
EPHB3P54753 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC6.67□□□□□ -1.34
EPHB3P54753 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC6.67□□□□□ -1.34
EPHB3P54753 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC6.67□□□□□ -1.34
EPHB3P54753 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC6.67□□□□□ -1.34
EPHB3P54753 AGGF1P4-201ENST00000568249 801 ntBASIC6.67□□□□□ -1.34
EPHB3P54753 AL121834.1-201ENST00000572284 509 ntBASIC6.67□□□□□ -1.34
EPHB3P54753 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC6.67□□□□□ -1.34
EPHB3P54753 AC078795.2-201ENST00000602835 1252 ntBASIC6.67□□□□□ -1.34
EPHB3P54753 Z82195.1-201ENST00000604558 398 ntBASIC6.67□□□□□ -1.34
EPHB3P54753 AL353621.2-201ENST00000605340 133 ntBASIC6.67□□□□□ -1.34
EPHB3P54753 AC124312.4-201ENST00000605533 310 ntBASIC6.67□□□□□ -1.34
EPHB3P54753 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC6.67□□□□□ -1.34
EPHB3P54753 OR7M1P-201ENST00000608946 533 ntBASIC6.67□□□□□ -1.34
EPHB3P54753 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC6.67□□□□□ -1.34
EPHB3P54753 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC6.67□□□□□ -1.34
EPHB3P54753 AP000254.1-201ENST00000609934 520 ntBASIC6.67□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms