Protein–RNA interactions for Protein: Q9Z2C6

Upk1b, Uroplakin-1b, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1bQ9Z2C6 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Upk1bQ9Z2C6 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Upk1bQ9Z2C6 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Upk1bQ9Z2C6 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Upk1bQ9Z2C6 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
Upk1bQ9Z2C6 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Upk1bQ9Z2C6 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Upk1bQ9Z2C6 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Upk1bQ9Z2C6 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Upk1bQ9Z2C6 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC15.68■□□□□ 0.1
Upk1bQ9Z2C6 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC15.68■□□□□ 0.1
Upk1bQ9Z2C6 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC15.68■□□□□ 0.1
Upk1bQ9Z2C6 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Upk1bQ9Z2C6 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Upk1bQ9Z2C6 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Upk1bQ9Z2C6 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Upk1bQ9Z2C6 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Upk1bQ9Z2C6 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Upk1bQ9Z2C6 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Upk1bQ9Z2C6 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Upk1bQ9Z2C6 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Upk1bQ9Z2C6 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.68■□□□□ 0.1
Upk1bQ9Z2C6 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Upk1bQ9Z2C6 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.68■□□□□ 0.1
Upk1bQ9Z2C6 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Upk1bQ9Z2C6 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Upk1bQ9Z2C6 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Upk1bQ9Z2C6 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Upk1bQ9Z2C6 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Upk1bQ9Z2C6 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Upk1bQ9Z2C6 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Upk1bQ9Z2C6 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Upk1bQ9Z2C6 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Upk1bQ9Z2C6 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC15.67■□□□□ 0.1
Upk1bQ9Z2C6 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC15.67■□□□□ 0.1
Upk1bQ9Z2C6 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC15.67■□□□□ 0.1
Upk1bQ9Z2C6 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Upk1bQ9Z2C6 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC15.67■□□□□ 0.1
Upk1bQ9Z2C6 Gm10138-203ENSMUST00000206952 366 ntBASIC15.67■□□□□ 0.1
Upk1bQ9Z2C6 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Upk1bQ9Z2C6 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Upk1bQ9Z2C6 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Upk1bQ9Z2C6 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Upk1bQ9Z2C6 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Upk1bQ9Z2C6 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Upk1bQ9Z2C6 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Upk1bQ9Z2C6 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC15.67■□□□□ 0.1
Upk1bQ9Z2C6 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Upk1bQ9Z2C6 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Upk1bQ9Z2C6 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Upk1bQ9Z2C6 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Upk1bQ9Z2C6 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Upk1bQ9Z2C6 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Upk1bQ9Z2C6 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Upk1bQ9Z2C6 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Upk1bQ9Z2C6 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Upk1bQ9Z2C6 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Upk1bQ9Z2C6 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Upk1bQ9Z2C6 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Upk1bQ9Z2C6 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Upk1bQ9Z2C6 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Upk1bQ9Z2C6 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
Upk1bQ9Z2C6 Rab3c-203ENSMUST00000224180 967 ntBASIC15.66■□□□□ 0.1
Upk1bQ9Z2C6 AC107711.5-202ENSMUST00000226429 702 ntBASIC15.66■□□□□ 0.1
Upk1bQ9Z2C6 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Upk1bQ9Z2C6 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Upk1bQ9Z2C6 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC15.66■□□□□ 0.1
Upk1bQ9Z2C6 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Upk1bQ9Z2C6 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Upk1bQ9Z2C6 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Upk1bQ9Z2C6 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Upk1bQ9Z2C6 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Upk1bQ9Z2C6 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Upk1bQ9Z2C6 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Upk1bQ9Z2C6 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Upk1bQ9Z2C6 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Upk1bQ9Z2C6 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC15.65■□□□□ 0.1
Upk1bQ9Z2C6 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Upk1bQ9Z2C6 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Upk1bQ9Z2C6 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Upk1bQ9Z2C6 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Upk1bQ9Z2C6 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Upk1bQ9Z2C6 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Upk1bQ9Z2C6 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Upk1bQ9Z2C6 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Upk1bQ9Z2C6 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Upk1bQ9Z2C6 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Upk1bQ9Z2C6 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Upk1bQ9Z2C6 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Upk1bQ9Z2C6 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Upk1bQ9Z2C6 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Upk1bQ9Z2C6 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Upk1bQ9Z2C6 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Upk1bQ9Z2C6 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Upk1bQ9Z2C6 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Upk1bQ9Z2C6 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Upk1bQ9Z2C6 Gm15375-201ENSMUST00000119510 849 ntBASIC15.64■□□□□ 0.09
Upk1bQ9Z2C6 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC15.64■□□□□ 0.09
Upk1bQ9Z2C6 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC15.64■□□□□ 0.09
Upk1bQ9Z2C6 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms