Protein–RNA interactions for Protein: Q9R1A9

Trex2, Three prime repair exonuclease 2, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex2Q9R1A9 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trex2Q9R1A9 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trex2Q9R1A9 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trex2Q9R1A9 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trex2Q9R1A9 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trex2Q9R1A9 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trex2Q9R1A9 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trex2Q9R1A9 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Trex2Q9R1A9 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trex2Q9R1A9 Gm28265-201ENSMUST00000188201 2319 ntBASIC14.22□□□□□ -0.13
Trex2Q9R1A9 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trex2Q9R1A9 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC14.22□□□□□ -0.13
Trex2Q9R1A9 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trex2Q9R1A9 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Trex2Q9R1A9 Gm37519-201ENSMUST00000191687 2210 ntBASIC14.22□□□□□ -0.13
Trex2Q9R1A9 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trex2Q9R1A9 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trex2Q9R1A9 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC14.22□□□□□ -0.13
Trex2Q9R1A9 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trex2Q9R1A9 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Trex2Q9R1A9 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trex2Q9R1A9 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trex2Q9R1A9 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trex2Q9R1A9 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC14.21□□□□□ -0.13
Trex2Q9R1A9 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trex2Q9R1A9 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trex2Q9R1A9 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trex2Q9R1A9 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trex2Q9R1A9 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Trex2Q9R1A9 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC14.21□□□□□ -0.13
Trex2Q9R1A9 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trex2Q9R1A9 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trex2Q9R1A9 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trex2Q9R1A9 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trex2Q9R1A9 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trex2Q9R1A9 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trex2Q9R1A9 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trex2Q9R1A9 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Trex2Q9R1A9 CT010444.2-201ENSMUST00000217877 1629 ntBASIC14.21□□□□□ -0.13
Trex2Q9R1A9 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trex2Q9R1A9 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trex2Q9R1A9 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trex2Q9R1A9 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trex2Q9R1A9 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC14.21□□□□□ -0.13
Trex2Q9R1A9 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trex2Q9R1A9 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trex2Q9R1A9 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trex2Q9R1A9 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC14.2□□□□□ -0.14
Trex2Q9R1A9 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trex2Q9R1A9 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trex2Q9R1A9 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC14.2□□□□□ -0.14
Trex2Q9R1A9 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trex2Q9R1A9 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trex2Q9R1A9 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trex2Q9R1A9 Mir1199-201ENSMUST00000117015 119 ntBASIC14.2□□□□□ -0.14
Trex2Q9R1A9 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trex2Q9R1A9 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trex2Q9R1A9 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC14.2□□□□□ -0.14
Trex2Q9R1A9 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Trex2Q9R1A9 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC14.2□□□□□ -0.14
Trex2Q9R1A9 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Trex2Q9R1A9 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trex2Q9R1A9 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Trex2Q9R1A9 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Trex2Q9R1A9 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trex2Q9R1A9 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trex2Q9R1A9 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trex2Q9R1A9 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trex2Q9R1A9 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trex2Q9R1A9 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trex2Q9R1A9 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trex2Q9R1A9 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Trex2Q9R1A9 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trex2Q9R1A9 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trex2Q9R1A9 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trex2Q9R1A9 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trex2Q9R1A9 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC14.19□□□□□ -0.14
Trex2Q9R1A9 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Trex2Q9R1A9 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC14.19□□□□□ -0.14
Trex2Q9R1A9 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trex2Q9R1A9 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
Trex2Q9R1A9 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC14.19□□□□□ -0.14
Trex2Q9R1A9 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trex2Q9R1A9 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trex2Q9R1A9 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trex2Q9R1A9 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trex2Q9R1A9 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trex2Q9R1A9 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC14.19□□□□□ -0.14
Trex2Q9R1A9 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC14.19□□□□□ -0.14
Trex2Q9R1A9 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trex2Q9R1A9 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trex2Q9R1A9 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trex2Q9R1A9 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trex2Q9R1A9 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trex2Q9R1A9 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC14.18□□□□□ -0.14
Trex2Q9R1A9 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trex2Q9R1A9 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trex2Q9R1A9 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trex2Q9R1A9 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trex2Q9R1A9 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms